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2022-12-20gnu: guix: Update to use guile-ssh 0.16. wip-guile-ssh-0.16Vagrant Cascadian
2022-12-20Merge remote-tracking branch 'origin/master' into wip-guile-ssh-0.16Vagrant Cascadian
2022-12-20gnu: Merge gdal and python-gdal packages.Guillaume Le Vaillant
* gnu/packages/geo.scm (gdal)[inputs]: Add swig and zstd. [native-inputs]: Add python. [propagated-inputs]: Add python-numpy. (python-gdal): Remove variable. (qgis)[inputs]: Remove python-gdal. [arguments]: Disable a flaky test.
2022-12-20gnu: gdal: Add support for lz4 and openjpeg.Roman Scherer
* gnu/packages/geo.scm (gdal)[inputs]: Add lz4 and openjpeg. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-12-20gnu: gdal: Update to 3.6.1.Felix Gruber
* gnu/packages/geo.scm (gdal): Update to 3.6.1. [inputs]: Add libjxl. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-12-20gnu: geos: Update to 3.11.1.Felix Gruber
* gnu/packages/geo.scm (geos): Update to 3.11.1. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-12-20gnu: python-cartopy: Update to 0.21.0.Felix Gruber
* gnu/packages/geo.scm (python-cartopy): Update to 0.21.0. [inputs]: Remove proj. [native-inputs]: Add python-pytest-mpl. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-12-20gnu: python-pyproj: Update to 3.4.0.Felix Gruber
* gnu/packages/geo.scm (python-pyproj): Update to 3.4.0. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-12-20gnu: libgeotiff: Apply patch for building against proj 9.1.1.Felix Gruber
* gnu/packages/patches/libgeotiff-fix-tests-with-proj-9.1.1.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/geo.scm (libgeotiff): Apply it. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-12-20gnu: proj: Update to 9.1.1.Felix Gruber
* gnu/packages/geo.scm (proj): Update to 9.1.1. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-12-20read-print: Add special forms.Ludovic Courtès
* guix/read-print.scm (%special-forms): Add 'define-configuration' and 'match-record'.
2022-12-20services: opensmtpd: Add 'shepherd-requirement' field.Bruno Victal
* gnu/services/mail.scm (<opensmtpd-configuration>)[shepherd-requirement]: New field. (opensmtpd-shepherd-service): Honor it. * doc/guix.texi (Mail Services): Document it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-12-20services: opensmtpd: Use 'match-record' instead of 'match'.Bruno Victal
* gnu/services/mail.scm (opensmtpd-shepherd-service) (opensmtpd-activation) (opensmtpd-set-gids): Use 'match-record' instead of 'match'. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-12-20cpio: Skip test on inode numbers that don't fit on 32 bits.Ludovic Courtès
Fixes <https://issues.guix.gnu.org/60202>. Reported by Christopher Baines <mail@cbaines.net>. * tests/cpio.scm (%test-file): New variable. ("file->cpio-header + write-cpio-header + read-cpio-header"): Use it. Skip test when the inode number of %TEST-FILE is too big.
2022-12-20doc: Avoid 'match' on the <udev-configuration> record.Ludovic Courtès
Fixes <https://issues.guix.gnu.org/59907>. Reported by MANCINI Raffael <Raffael.MANCINI@mnhn.lu>. * doc/guix.texi (Service Types and Services): Change 'udev-configuration' example to avoid 'match'.
2022-12-20tests: Adjust 'guix package' test to latest package search metrics.Ludovic Courtès
With commit bbcd06e56c06376e640a7ac81a7109e7135a20f2, the command "guix package -s '^fileutils$'" would match the 'ocaml-fileutils' package, because its 'package-upstream-name*' is "fileutils". Work around it. Reported by Vagrant Cascadian. * tests/guix-package.sh: Change "fileutils" example to use a different package name.
2022-12-20gnu: seabios: Limit to i686-linux and x86_64-linux.Efraim Flashner
* gnu/packages/firmware.scm (seabios)[supported-systems]: New field.
2022-12-20Revert "gnu: QEMU: Unbundle SeaBIOS."Efraim Flashner
This reverts commit 814214c369851da50e7006266f718b2d9324ada0. SeaBIOS is only buildable on i686-linux machines and has flags set to force building for i386 so that it works from x86_64-linux. This commit breaks qemu and qemu-minimal on all other architectures.
2022-12-20gnu: openjdk18: Update to 18.0.2.Greg Hogan
* gnu/packages/java.scm (openjdk18): Update to 18.0.2. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-12-20gnu: openjdk17: Update to 17.0.5.Greg Hogan
* gnu/packages/java.scm (openjdk17): Update to 17.0.5. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-12-20gnu: openjdk16: Update to 16.0.2.Greg Hogan
* gnu/packages/java.scm (openjdk16): Update to 16.0.2. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-12-20gnu: openjdk15: Update to 15.0.9.Greg Hogan
* gnu/packages/java.scm (openjdk15): Update to 15.0.9. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-12-20gnu: openjdk13: Update to 13.0.13.Greg Hogan
* gnu/packages/java.scm (openjdk13): Update to 13.0.13. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-12-20gnu: openjdk11: Fix find-files syntax.Efraim Flashner
* gnu/packages/java.scm (openjdk11)[source]: Remove extra characters from find-files invocation. [arguments]: Remove extra characters from find-files invocations in multiple phases.
2022-12-20gnu: openjdk11: Update to 11.0.17.Greg Hogan
* gnu/packages/java.scm (openjdk11): Update to 11.0.17. [source]: Fix source file-name. [native-inputs]: Add bash. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-12-19gnu: guix: Use 0 for revision.Vagrant Cascadian
2022-12-19gnu: guix: Update to use newer guile-ssh.Vagrant Cascadian
* gnu/packages/package-management.scm (guix): Update.
2022-12-19gnu: guile-ssh: Update to 0.16.0.Vagrant Cascadian
* gnu/packages/ssh.scm (guile-ssh): Update to 0.16.0.
2022-12-19gnu: QEMU: Unbundle SeaBIOS.Marius Bakke
* gnu/packages/virtualization.scm (qemu)[source](snippet): Delete SeaBIOS ROMs and source code. [arguments]: Add replace-firmwares and delete-firmwares phases. [inputs]: Add SEABIOS. [native-inputs]: Add ACPICA. While here, sort inputs.
2022-12-19gnu: SeaBIOS: Prettify version string.Marius Bakke
* gnu/packages/firmware.scm (seabios)[arguments]: Display version as "1.16.1/GNU Guix" instead of "1.16.1-guix".
2022-12-19gnu: SeaBIOS: Build in parallel.Marius Bakke
* gnu/packages/firmware.scm (seabios)[arguments]: Use N-PAR-FOR-EACH to build the various targets.
2022-12-19gnu: SeaBIOS: Build more BIOSen.Marius Bakke
* gnu/packages/firmware.scm (seabios)[arguments]: Build the "128k" and "microvm" BIOSen expected by QEMU. Fix installation of vgabios.
2022-12-19gnu: SeaBIOS: Remove pre-generated code.Marius Bakke
* gnu/packages/firmware.scm (seabios)[source](modules, snippet): New fields. [native-inputs]: Add ACPICA. [arguments]: Add build-iasl phase.
2022-12-19gnu: SeaBIOS: Use G-expression.Marius Bakke
* gnu/packages/firmware.scm (seabios)[arguments]: Rewrite as gexp.
2022-12-19gnu: cdo: Update to 2.1.0.Roman Scherer
* gnu/packages/geo.scm (cdo): Update to 2.1.0. [inputs]: Add curl, eccodes, fftw, hdf5, libxml2, proj and udunits. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-12-19gnu: Add eccodes.Roman Scherer
* gnu/packages/geo.scm (eccodes): New variable. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-12-19gnu: Add libaec.Roman Scherer
* gnu/packages/geo.scm (libaec): New variable. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-12-19gnu: Add r-cardelino.zimoun
* gnu/packages/bioconductor.scm (r-cardelino): New variable.
2022-12-19gnu: emacs-org-transclusion: Update to 1.3.1.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-org-transclusion): Update to 1.3.1.
2022-12-19gnu: r-mixtools: Update to 2.0.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-mixtools): Update to 2.0.0. [propagated-inputs]: Add r-plotly and r-scales.
2022-12-19gnu: r-ggbeeswarm: Update to 0.7.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-ggbeeswarm): Update to 0.7.1. [propagated-inputs]: Add r-lifecycle.
2022-12-19gnu: r-segmented: Update to 1.6-2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-segmented): Update to 1.6-2.
2022-12-19gnu: r-xml: Update to 3.99-0.13.Ricardo Wurmus
* gnu/packages/statistics.scm (r-xml): Update to 3.99-0.13.
2022-12-19gnu: r-rmarkdown: Update to 2.19.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.19.
2022-12-19gnu: r-openssl: Update to 2.0.5.Ricardo Wurmus
* gnu/packages/statistics.scm (r-openssl): Update to 2.0.5.
2022-12-19gnu: r-roxygen2: Update to 7.2.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-roxygen2): Update to 7.2.3. [propagated-inputs]: Remove r-digest.
2022-12-19gnu: r-whisker: Update to 0.4.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-whisker): Update to 0.4.1.
2022-12-19gnu: r-testthat: Update to 3.1.6.Ricardo Wurmus
* gnu/packages/statistics.scm (r-testthat): Update to 3.1.6.
2022-12-19gnu: r-evaluate: Update to 0.19.Ricardo Wurmus
* gnu/packages/statistics.scm (r-evaluate): Update to 0.19.
2022-12-19gnu: r-digest: Update to 0.6.31.Ricardo Wurmus
* gnu/packages/statistics.scm (r-digest): Update to 0.6.31.
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