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2016-11-04gnu: Add python-nbconvert.Ricardo Wurmus
* gnu/packages/python.scm (python-nbconvert, python2-nbconvert): New variables.
2016-11-04gnu: Add python-entrypoints.Ricardo Wurmus
* gnu/packages/python.scm (python-entrypoints, python2-entrypoints): New variables.
2016-11-04gnu: chromium-bsu: Update to 0.9.16.1.Kei Kebreau
* gnu/packages/games.scm (chromium-bsu): Update to 0.9.16.1. [arguments]: Remove 'set-sdl-paths phase. [inputs]: Add gnu-gettext.
2016-11-04gnu: cross-base: Remove exports of cross compilers.Ludovic Courtès
They were never really needed and caused troubles in the presence of circular module dependencies as reported by Danny Milosavljevic <dannym@scratchpost.org> at <https://lists.gnu.org/archive/html/guix-devel/2016-11/msg00144.html>. * gnu/packages/cross-base.scm (xgcc-mips64el, xgcc-xtensa, xgcc-armhf): Remove. * gnu/packages/firmware.scm (ath9k-htc-firmware)[native-inputs]: Use 'cross-gcc' instead of XGCC-XTENSA.
2016-11-04gnu: Remove '%final-inputs' references at the top level.Ludovic Courtès
Due to circular dependencies, referring to bindings exported by other modules from the top level is frowned upon. This patch addresses one of the remaining cases. * gnu/packages/base.scm (%final-inputs): New procedure. * gnu/packages/cross-base.scm: Remove (gnu packages commencement) import. (cross-gcc): Use the new '%final-inputs'. * gnu/packages/make-bootstrap.scm: Remove (gnu packages commencement) import. (package-with-relocatable-glibc): Use the new '%final-inputs'.
2016-11-04gnu: r-nmf: Use bigmemory.Roel Janssen
* gnu/packages/statistics.scm (r-nmf)[propagated-inputs]: Add r-bigmemory and r-synchronicity.
2016-11-04gnu: Add r-bigmemory.Roel Janssen
* gnu/packages/statistics.scm (r-bigmemory): New variable.
2016-11-04gnu: Add r-synchronicity.Roel Janssen
* gnu/packages/statistics.scm (r-synchronicity): New variable.
2016-11-04gnu: Add r-bigmemory-sri.Roel Janssen
gnu/packages/statistics.scm (r-bigmemory-sri): New variable.
2016-11-04gnu: xmp: Update to 4.1.0.宋文武
* gnu/packages/audio.scm (xmp): Update to 4.1.0.
2016-11-04gnu: libxmp: Update to 4.4.1.宋文武
* gnu/packages/audio.scm (libxmp): Update to 4.4.1.
2016-11-04gnu: Add swh-plugins-lv2.Florian Paul Schmidt
* gnu/packages/audio.scm (swh-plugins-lv2): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2016-11-04gnu: Add python-bleach.Ricardo Wurmus
* gnu/packages/python.scm (python-bleach, python2-bleach): New variables.
2016-11-04gnu: Add python-nbformat.Ricardo Wurmus
* gnu/packages/python.scm (python-nbformat, python2-nbformat): New variables.
2016-11-04gnu: Add python-html5lib-0.9.Ricardo Wurmus
* gnu/packages/python.scm (python-html5lib-0.9, python2-html5lib-0.9): New variables.
2016-11-04gnu: Add python-testpath.Ricardo Wurmus
* gnu/packages/python.scm (python-testpath, python2-testpath): New variables.
2016-11-04gnu: Add python-ipykernel.Ricardo Wurmus
* gnu/packages/python.scm (python-ipykernel, python2-ipykernel): New variables.
2016-11-04gnu: Add python-jupyter-client.Ricardo Wurmus
* gnu/packages/python.scm (python-jupyter-client, python2-jupyter-client): New variables.
2016-11-04gnu: Add python-jupyter-core.Ricardo Wurmus
* gnu/packages/python.scm (python-jupyter-core, python2-jupyter-core): New variables.
2016-11-04gnu: python-traitlets: Update to 4.2.0.Ricardo Wurmus
* gnu/packages/python.scm (python-traitlets): Update to 4.2.0.
2016-11-03gnu: Add font-adobe-source-code-pro.Marius Bakke
* gnu/packages/fonts.scm (font-adobe-source-code-pro): New variable.
2016-11-03gnu: Add geteltorito.Marius Bakke
* gnu/packages/cdrom.scm (geteltorito): New variable.
2016-11-03gnu: maxima: Update to 5.38.1.Kei Kebreau
* gnu/packages/maths.scm (maxima): Update to 5.38.1.
2016-11-03gnu: starfighter: Update to 1.6.Kei Kebreau
* gnu/packages/games.scm (starfighter): Update to 1.6.
2016-11-03gnu: r-rcas: Update to 1.0.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rcas): Update to 1.0.0.
2016-11-03gnu: r-rtracklayer: Update to 1.34.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.34.1.
2016-11-03gnu: r-biocparallel: Update to 1.8.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.8.1.
2016-11-03gnu: r-limma: Update to 3.30.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.30.2.
2016-11-03gnu: r-edger: Update to 3.16.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.16.1.
2016-11-03gnu: r-hmisc: Update to 4.0.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-hmisc): Update to 4.0.0. [propagated-inputs]: Add r-htmltable, r-htmltools, r-viridis, r-survival.
2016-11-03gnu: r-r-oo: Update to 1.21.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-r-oo): Update to 1.21.0.
2016-11-03gnu: r-openssl: Update to 0.9.5.Ricardo Wurmus
* gnu/packages/statistics.scm (r-openssl): Update to 0.9.5.
2016-11-03gnu: r-checkmate: Update to 1.8.2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-checkmate): Update to 1.8.2.
2016-11-03gnu: r-acepack: Update to 1.4.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-acepack): Update to 1.4.1.
2016-11-03gnu: r-gdtools: Update to 0.1.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-gdtools): Update to 0.1.1. [propagated-inputs]: Add r-withr.
2016-11-03gnu: r-proto: Update to 1.0.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-proto): Update to 1.0.0.
2016-11-03gnu: Add r-survival.Ricardo Wurmus
* gnu/packages/statistics.scm (r-survival): New variable.
2016-11-03gnu: Add r-htmltable.Ricardo Wurmus
* gnu/packages/web.scm (r-htmltable): New variable.
2016-11-03[PATCH] gnu: Add libjxr.Kei Kebreau
* gnu/packages/image.scm (libjxr): New variable. * gnu/packages/patches/libjxr-fix-function-signature.patch: New file. * gnu/packages/patches/libjxr-fix-typos.patch: New file. * gnu/local.mk (dist_patch_DATA): Register patches.
2016-11-03import: cran: Fix off-by-one error.Ricardo Wurmus
* guix/import/cran.scm (package->upstream-name): Do not include leading slash in upstream name URL.
2016-11-03gnu: sunxi-tools: Update to 1.4.1.Danny Milosavljevic
* gnu/packages/admin.scm (sunxi-tools): Update to 1.4.1. [arguments]: Add "CC=gcc" "all" to #:make-flags. Remove 'fix-Makefile' phase. Add 'install' phase. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-11-03tests: 'make check-system' prints the "build trace".Ludovic Courtès
* build-aux/run-system-tests.scm (run-system-tests): Pass #:print-build-trace to 'set-build-options*'.
2016-11-03gnu: Add pdf2svg.Arun Isaac
* gnu/packages/pdf.scm (pdf2svg): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-11-02gnu: gnurl: Update to 7.51.0 [fixes CVE-2016-{8615..8625}].ng0
* gnu/packages/gnunet.scm (gnurl): Update to 7.51.0. Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-02gnu: Add perl-getopt-long.Alex Sassmannshausen
* gnu/packages/perl.scm (perl-getopt-long): New variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-02gnu: curl: Update replacement to 7.51.0 [fixes CVE-2016-{8615..8625}].Marius Bakke
* gnu/packages/curl.scm (curl)[replacement]: Update to 7.51.0. (curl-7.50.3): Replace with ... (curl-7.51.0): ... this.
2016-11-02gnu: linux-libre: Update to 4.8.6.Mark H Weaver
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash) (linux-libre): Update to 4.8.6.
2016-11-02gnu: linux-libre@4.4: Update to 4.4.30.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.30.
2016-11-02gnu: perl-test-simple: Update to 1.302062.Ricardo Wurmus
* gnu/packages/perl.scm (perl-test-simple): Update to 1.302062.
2016-11-02gnu: re2: Update to 2016-11-01.Marius Bakke
* gnu/packages/regex.scm (re2): Update to 2016-11-01.
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