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2016-12-13gnu: onionshare: Update to 0.9.2 (fixes CVE-2016-5026).Efraim Flashner
* gnu/packages/tor.scm (onionshare): Update to 0.9.2. [source]: Remove patch. [arguments]: Update substitutions for new version. * gnu/packages/patches/onionshare-fix-install-paths.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
2016-12-13gnu: diamond: Update to 0.8.29.Ben Woodcroft
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.29.
2016-12-13gnu: orfm: Update to 0.6.1.Ben Woodcroft
* gnu/packages/bioinformatics.scm (orfm): Update to 0.6.1.
2016-12-13gnu: libsrtp: Fix building on mips.Efraim Flashner
* gnu/packages/telephony.scm (libsrtp)[arguments]: Add substitution changing variable name from 'mips' to 'mips_value'. Also substitute dictionary location in test suite.
2016-12-13gnu: libsrtp: Have source use file-name.Efraim Flashner
* gnu/packages/telephony.scm (libsrtp)[source]: Add file-name field.
2016-12-13gnu: libjpeg-turbo: Fix build on mips.Efraim Flashner
* gnu/packages/image.scm (libjpeg-turbo)[arguments]: Add substitution to set variable type before use.
2016-12-13gnu: lftp: Update to 4.7.4.Marius Bakke
* gnu/packages/ftp.scm (lftp): Update to 4.7.4. [home-page]: Change to new domain. [source]: Adjust to new domain. Add mirror.
2016-12-13gnu: python-setuptools: Update to 31.0.0.Marius Bakke
* gnu/packages/python.scm (python-setuptools, python2-setuptools): Update to 31.0.0. [source]: Use 'pypi-uri'. [license]: Update for bundled libraries.
2016-12-13gnu: duplicity: Use 'modify-phases' syntax.Marius Bakke
* gnu/packages/backup.scm (duplicity)[arguments]: Use 'modify-phases'.
2016-12-12import: cpan: Add updater.Eric Bavier
* guix/import/cpan.scm (module->dist-name): Fetch the field of interest. (cpan-fetch): Accept release name rather than module name. (fix-source-url): Rename to ... (cpan-source-url): ... this. Take metadata as parameter. (package->upstream-name, cpan-version, cpan-package?, latest-release): New procedures. (cpan-module->sexp): Use cpan-version and cpan-source-url. (%cpan-updater): New variable. * guix/scripts/refresh.scm (%updaters): Add %CPAN-UPDATER.
2016-12-12import: cpan: Move core-module? to top-level.Eric Bavier
* guix/import/cpan.scm (cpan-module->sexp): Move local core-module? procedure to ... (core-module?): ... here.
2016-12-12import: json: Silence json-fetch output.Eric Bavier
* guix/import/json.scm (json-fetch): Use http-fetch instead of url-fetch to avoid writing to stdout and a temporary file for each invocation. * guix/import/gem.scm (rubygems-fetch): Do not redirect json-fetch output to /dev/null. * guix/import/pypi.scm (pypi-fetch): Likewise.
2016-12-13gnu: xf86-video-nouveau: Update to 1.0.13.Tobias Geerinckx-Rice
* gnu/packages/xorg.scm (xf86-video-nouveau): Update to 1.0.13.
2016-12-13gnu: xf86-input-synaptics: Update to 1.9.0.Tobias Geerinckx-Rice
* gnu/packages/xorg.scm (xf86-input-synaptics): Update to 1.9.0.
2016-12-13gnu: xf86-input-mouse: Update to 1.9.2.Tobias Geerinckx-Rice
* gnu/packages/xorg.scm (xf86-input-mouse): Update to 1.9.2.
2016-12-13gnu: xf86-input-joystick: Update to 1.6.3.Tobias Geerinckx-Rice
* gnu/packages/xorg.scm (xf86-input-joystick): Update to 1.6.3.
2016-12-13gnu: xf86-input-evdev: Update to 2.10.4.Tobias Geerinckx-Rice
* gnu/packages/xorg.scm (xf86-input-evdev): Update to 2.10.4.
2016-12-13gnu: nano: Update to 2.7.2.Tobias Geerinckx-Rice
* gnu/packages/nano.scm (nano): Update to 2.7.2.
2016-12-12gnu: perl-dbix-class-introspectablem2m: Update source tarball URL.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-dbix-class-introspectablem2m)[source]: Update tarball URL.
2016-12-12gnu: cssc: Update to 1.4.0.Tobias Geerinckx-Rice
* gnu/packages/version-control.scm (cssc): Update to 1.4.0. [source]: Remove unneeded patches (i.e. all of them). * gnu/packages/patches/cssc-gets-undeclared.patch: Delete file. * gnu/packages/patches/cssc-missing-include.patch: Likewise. * gnu/local.mk (dist_patch_DATA): Remove deleted patches.
2016-12-12gnu: gsl: Update to 2.3.Tobias Geerinckx-Rice
* gnu/packages/maths.scm (gsl): Update to 2.3.
2016-12-12gnu: vim: Update to 8.0.0133.Tobias Geerinckx-Rice
* gnu/packages/vim.scm (vim, vim-full): Update to 8.0.0133.
2016-12-12gnu: denemo: Change default preferences to use the already-present lilypond.Kei Kebreau
* gnu/packages/music.scm (denemo)[progpagated-inputs]: Move lilypond to ... [inputs]: ... here. [phases]: New phase set-lilypond.
2016-12-12gnu: calibre: Update to 2.74.0.Efraim Flashner
* gnu/packages/ebook.scm (calibre): Update to 2.74.0.
2016-12-12gnu: python-sip: Update to 4.18.1.Efraim Flashner
* gnu/packages/qt.scm (python-sip): Update to 4.18.1.
2016-12-12gnu: python-pyqt-4: Use 'modify-phases' syntax.Efraim Flashner
* gnu/packages/qt.scm (python-pyqt-4)[arguments]: Use 'modify-phases' syntax.
2016-12-12gnu: python-pyqt@5.5: Remove variable.Efraim Flashner
* gnu/packages/qt.scm (python-pyqt@5.5, python2-pyqt@5.5): Remove them.
2016-12-12gnu: calibre: Update qt dependancies.Efraim Flashner
* gnu/packages/ebook.scm (calibre)[native-inputs]: Remove qt, add qtbase. [inputs]: Remove qt, replace python2-pyqt@5.5 with python2-pyqt.
2016-12-12gnu: python-pyqt: Build with more qt modules.Efraim Flashner
* gnu/packages/qt.scm (python-pyqt)[inputs]: Add qtbase, qtconnectivity, qtdeclarative, qtlocation, qtmultimedia, qtsensors, qtserialport, qtsvg, qttools, qtwebchannel, qtwebkit, qtwebsockets, qtx11extras, qtxmlpatterns. (python2-pyqt)[inputs]: Same. (python-pyqt@4)[inputs]: Only use python.
2016-12-12gnu: orfm: Update to 0.6.0.Ben Woodcroft
* gnu/packages/bioinformatics.scm (orfm): Update to 0.6.0.
2016-12-11gnu: direnv: Update to 2.10.0.Christopher Baines
* gnu/packages/shellutils.scm (direnv): Update to 2.10.0. Signed-off-by: Leo Famulari <leo@famulari.name>
2016-12-11Merge branch 'staging'Leo Famulari
2016-12-11gnu: sunxi-tools: Update to 1.4.2.Danny Milosavljevic
* gnu/packages/admin.scm (sunxi-tools): Update to 1.4.2. Signed-off-by: Leo Famulari <leo@famulari.name>
2016-12-11gnu: python-html5lib: Add dependency on python-webencodings.Marius Bakke
* gnu/packages/python.scm (python-html5lib, python2-html5lib)[propagated-inputs]: Add python-webencodings.
2016-12-11gnu: Add python-webencodings.Marius Bakke
* gnu/packages/python.scm (python-webencodings, python2-webencodings): New variables.
2016-12-11gnu: linux-libre: Update to 4.8.14.Mark H Weaver
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash) (linux-libre): Update to 4.8.14. Remove patches. (linux-libre-arm-generic): Remove patches.
2016-12-11gnu: linux-libre@4.4: Update to 4.4.38.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.38. Remove patches.
2016-12-11gnu: fcgi: Disable parallel building.Ricardo Wurmus
* gnu/packages/web.scm (fcgi)[arguments]: Disable parallel building.
2016-12-11gnu: Add sshoot.Tobias Geerinckx-Rice
* gnu/packages/vpn.scm (sshoot): New variable.
2016-12-11gnu: Add python-argcomplete.Tobias Geerinckx-Rice
* gnu/packages/python.scm (python-argcomplete): New variable.
2016-12-11gnu: Add sshuttle.Tobias Geerinckx-Rice
* gnu/packages/vpn.scm (sshuttle): New variable.
2016-12-11services: Activate system prior to services.Christopher Baines
* gnu/services.scm (activation-script): Move 'activation-current-system' call before (for-each primitive-load …). Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-11gnu: openjpeg-2.1.2: Use a meaningful file-name for the source code.Leo Famulari
This is a followup to commit 0e8b7b1c351a2307bfc33211b4d76dbe7dfa01ef. * gnu/packages/image.scm (openjpeg-2.1.2)[source]: Give a meaningful file-name.
2016-12-11gnu: diffoscope: Update to 63.Leo Famulari
* gnu/packages/package-management.scm (diffoscope): Update to 63. [arguments]: Remove obsolete 'disable-failing-test' and 'disable-egg-zipping' phases. The former was fixed upstream, and the latter is fixed by the new Python build system.
2016-12-11gnu: openjpeg: Update replacement to 2.1.2 [fixes CVE-2016-{7445,8332}].Leo Famulari
* gnu/packages/image.scm (openjpeg/fixed): Replace variable with ... (openjpeg-2.1.2): ... this. [patches]: Remove patches inherited from openjpeg. (openjpeg)[replacement]: Replace with openjpeg-2.1.2.
2016-12-10Merge branch 'master' into stagingMark H Weaver
2016-12-10gnu: Add denemo.Kei Kebreau
* gnu/packages/music.scm (denemo): New variable.
2016-12-11gnu: libpsl: Update to 0.16.0.Tobias Geerinckx-Rice
* gnu/packages/web.scm (libpsl): Update to 0.16.0.
2016-12-10gnu: Add ocaml-menhir.David Craven
* gnu/packages/ocaml.scm (ocaml-menhir): New variable.
2016-12-10gnu: coq: Update to 8.5pl2.David Craven
* gnu/packages/ocaml.scm (coq): Update to 8.5pl2. [arguments]: Configure script takes single hyphen arguments.
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