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2017-11-27gnu: guile-wisp: Update to 0.9.8.Ludovic Courtès
* gnu/packages/guile.scm (guile-wisp): Update to 0.9.8. [inputs]: Remove PYTHON. [native-inputs]: New field. [arguments]: Keep 'install' phase. Add 'install-go-files' phase. Adjust 'substitute-before-config' phase.
2017-11-27gnu: Add java-jbzip2.Ricardo Wurmus
* gnu/packages/compression.scm (java-jbzip2): New variable.
2017-11-27gnu: Add java-picard-1.113.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (java-picard-1.113): New variable.
2017-11-27gnu: Add ant-junit.Ricardo Wurmus
* gnu/packages/java.scm (ant-junit): New variable.
2017-11-27gnu: Add ant-apache-bcel.Ricardo Wurmus
* gnu/packages/java.scm (ant-apache-bcel): New variable.
2017-11-27gnu: Add java-commons-bcel.Ricardo Wurmus
* gnu/packages/java.scm (java-commons-bcel): New variable.
2017-11-27gnu: Add java-cofoja.Ricardo Wurmus
* gnu/packages/java.scm (java-cofoja): New variable.
2017-11-27gnu: Add java-picard.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (java-picard): New variable.
2017-11-27gnu: java-htsjdk: Update to 2.3.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (java-htsjdk): Update to 2.3.0. [arguments]: Build with JDK 8. [inputs]: Add java-ngs, java-snappy, java-commons-compress, java-commons-logging-minimal, java-commons-jexl-2, and java-xz. [native-inputs]: Add java-testng.
2017-11-27gnu: Add java-commons-jexl-2.Ricardo Wurmus
* gnu/packages/java.scm (java-commons-jexl-2): New variable.
2017-11-27gnu: Add javacc-4.Ricardo Wurmus
* gnu/packages/java.scm (javacc-4): New variable.
2017-11-27gnu: Add javacc.Ricardo Wurmus
* gnu/packages/java.scm (javacc): New variable.
2017-11-27gnu: Add java-snappy-1.Ricardo Wurmus
* gnu/packages/compression.scm (java-snappy-1): New variable.
2017-11-27gnu: librecad: Ensure that icons are found at runtime.Ricardo Wurmus
* gnu/packages/engineering.scm (librecad)[arguments]: Add phase "wrap-executable".
2017-11-27gnu: r-rhdf5: Fix build phase.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rhdf5)[arguments]: Fix "unpack-smallhdf5" phase.
2017-11-26gnu: shotwell: Update to 0.27.1.Leo Famulari
* gnu/packages/gnome.scm (shotwell): Update to 0.27.1.
2017-11-26Update e-mail for ng0.ng0
* .mailmap: Update entries for ng0. Signed-off-by: Leo Famulari <leo@famulari.name>
2017-11-26gnu: fish-guix: Use new URL.ng0
* gnu/packages/shells.scm (fish-guix)[source]: Use new URL. (home-page): Use new URL. Signed-off-by: Leo Famulari <leo@famulari.name>
2017-11-26gnu: python-pycanberra: Switch to new download URL.ng0
* gnu/packages/libcanberra.scm (python-pycanberra)[source]: Use new URL. Signed-off-by: Leo Famulari <leo@famulari.name>
2017-11-26gnu: crawl: Update to 0.20.1.nee
* gnu/packages/games.scm (crawl): Update to 0.20.1. (crawl-tiles): Update to 0.20.1. [native-inputs]: Add pngcrush. Signed-off-by: Leo Famulari <leo@famulari.name>
2017-11-26gnu: openntpd: Update to 6.2p3.Efraim Flashner
* gnu/packages/ntp.scm (openntpd): Update to 6.2p3.
2017-11-26gnu: exim: Fix CVE-2017-16943.Leo Famulari
* gnu/packages/patches/exim-CVE-2017-16943.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/mail.scm (exim)[source]: Use it.
2017-11-26gnu: image: Rename pngcrunch to pngcrush and update it.nee
* gnu/packages/image.scm (pngcrush): Renamed from pngcrunch. [version]: update to 1.8.13. [arguments]: Use the nolib Makefile. [origin]: Use the no-lib tar. [home-page]: update to the new website. (pngcrunch): New deprecation variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-11-26list-runtime-roots: Ignore ESRCH while reading from /proc.Ludovic Courtès
Fixes <https://bugs.gnu.org/29368>. Reported by Martin Castillo <castilma@uni-bremen.de>. * nix/scripts/list-runtime-roots.in (referenced-files): Ignore ESRCH.
2017-11-26tests: messaging: Enable Prosody DIGEST-MD5 auth mechanism.Clément Lassieur
GNU Freetalk doesn't support SCRAM-SHA-1. * gnu/tests/messaging.scm (%test-prosody): Override default disable-sasl-mechanisms value.
2017-11-26services: prosody: Add support for disable-sasl-mechanisms.Clément Lassieur
* doc/guix.texi (Messaging Services): Update accordingly. * gnu/services/messaging.scm (prosody-configuration)[disable-sasl-mechanisms]: New field.
2017-11-26services: prosody: Allow to add raw content to the config file.Clément Lassieur
* doc/guix.texi (Messaging Services): Update accordingly. * gnu/services/messaging.scm (prosody-configuration)[raw-content]: New field. (raw-content?, serialize-raw-content): New procedures.
2017-11-26services: prosody: Add support for http-max-content-size.Clément Lassieur
* doc/guix.texi (Messaging Services): Update accordingly. * gnu/services/messaging.scm (prosody-configuration)[http-max-content-size]: New field.
2017-11-26services: prosody: Add support for http-external-url.Clément Lassieur
* doc/guix.texi (Messaging Services): Update accordingly. * gnu/services/messaging.scm (prosody-configuration)[http-external-url]: New field.
2017-11-26services: prosody: Adapt to Prosody 0.10.0.Clément Lassieur
* doc/guix.texi (Messaging Services): Add "mam" as a module example. Document 'prosodyctl check'. Replace 'prosodyctl cert request' with 'prosodyctl cert import'. Regenerate it. * gnu/services/messaging.scm (serialize-module-list): Remove "posix" from the default modules list because it is now automatically loaded. (ssl-configuration)[key, certificate]: Remove them because they are now automatically located. Fix their docstrings. (%default-modules-enabled): Add "carbons" and "blocklist". (prosody-configuration)[certificates]: Set default directory from which certificates/keys will be automatically located.
2017-11-26gnu: prosody: Add lua5.1-bitop to inputs.Clément Lassieur
It is required for mod_websocket on Lua 5.1 since Prosody 0.10. * gnu/packages/messaging.scm (prosody)[inputs]: Add lua5.1-bitop.
2017-11-26gnu: Add lua5.1-bitop.Clément Lassieur
* gnu/packages/lua.scm (make-lua-bitop): New procedure. (lua5.2-bitop): Call make-lua-bitop. (lua5.1-bitop): New variable.
2017-11-26gnu: prosody: Update to 0.10.0.Rutger Helling
* gnu/packages/messaging.scm (prosody): Update to 0.10.0. Signed-off-by: Clément Lassieur <clement@lassieur.org>
2017-11-26vm: Use os-defined initrd intead of base-initrd.Mathieu Othacehe
* gnu/system/vm.scm (system-disk-image, system-qemu-image, virtualized-operating-system): Replace base-initrd by (operating-system-initrd os). The system produced were always using base-initrd even if the user had defined a custom initrd based on raw-initrd in the os declaration.
2017-11-26gnu: qtox: Update to 1.13.0.Rutger Helling
* gnu/packages/messaging.scm (qtox): Update to 1.13.0. Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2017-11-26gnu: tidy-html: Update to 5.6.0.Rutger Helling
* gnu/packages/web.scm (tidy-html): Update to 5.6.0. Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2017-11-26gnu: mongodb: Remove some bundled sources.Efraim Flashner
* gnu/packages/databases.scm (mongodb)[source]: Add snippet to remove some of the bundled sources. [input]: Remove unused boost input.
2017-11-26gnu: mongodb: Use system wiredtiger when available.Efraim Flashner
* gnu/packages/databases.scm (mongodb)[inputs]: Add wiredtiger on 64-bit systems. [arguments]: When using wiredtiger, use system wiredtiger.
2017-11-26gnu: mongodb: Build without wiredtiger on 32-bit systems.Efraim Flashner
* gnu/packages/databases.scm (mongodb)[arguments]: Add a configure-flag to build without wiredtiger support on 32-bit systems.
2017-11-25gnu: mongodb: Update to 3.4.10.Leo Famulari
* gnu/packages/databases.scm (mongodb): Update to 3.4.10.
2017-11-25gnu: diffoscope: Fix error messages related to comparison tools.Kei Kebreau
* gnu/packages/package-management.scm (diffoscope)[arguments]: Replace readelf substitution and add stat and getfacl substitutions. [inputs]: Add acl. Errors fixed include the following: "FileNotFoundError: [Errno 2] No such file or directory: 'readelf'" "diffoscope.comparators.directory: Unable to find 'getfacl', some directory metadata differences might not be noticed." "diffoscope.comparators.directory: Unable to find 'stat'"
2017-11-25gnu: qtsensors: Disable parallel tests.Efraim Flashner
* gnu/packages/qt.scm (qtsensors)[arguments]: Disable parallel tests.
2017-11-25gnu: guile-emacs: Resurrect, fixes #29186.Jan Nieuwenhuizen
* gnu/packages/patches/guile-emacs-fix-configure.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/emacs.scm (guile-emacs): Use it. Add workaround for src/deps dir creation. Fixes #29186.
2017-11-25gnu: enlightenment: Update to 0.22.1.Efraim Flashner
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.22.1.
2017-11-25gnu: efl: Update to 1.20.6.Efraim Flashner
* gnu/packages/enlightenment.scm (efl): Update to 1.20.6.
2017-11-25syscalls: Adjust utmpx test.Ludovic Courtès
Fixes <https://bugs.gnu.org/29426>. Reported by Adonay Felipe Nogueira <adfeno@hyperbola.info>. * tests/syscalls.scm ("utmpx-entries"): Check the value of (utmpx-entries entry) only for INIT_PROCESS, LOGIN_PROCESS, and USER_PROCESS entries.
2017-11-25gnu: utox: Make CHECK a native-input.Leo Famulari
This is a followup to commit 907ab9e8cbab10413848dfc8982cfc851e03903f. * gnu/packages/messaging.scm (utox)[inputs]: Move CHECK ... [native-inputs]: ... here.
2017-11-25gnu: linux-libre: Update to 4.14.2.Mark H Weaver
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.14.2. (%linux-libre-hash): Update hash.
2017-11-25gnu: linux-libre@4.9: Update to 4.9.65.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.65.
2017-11-25gnu: linux-libre@4.4: Update to 4.4.102.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.102.
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