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2018-02-16Merge branch 'master' into core-updatesMark H Weaver
2018-02-16gnu: ruby-sqlite3: Adjust failing test.Marius Bakke
* gnu/packages/ruby.scm (ruby-sqlite3): Adjust test to work with SQLite 3.21.
2018-02-16gnu: ghc: Make memory allocator decommit memory on Linux < 4.5.Danny Milosavljevic
* gnu/packages/patches/ghc-8.0-fall-back-to-madv_dontneed.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/haskell.scm (ghc-8): Use it.
2018-02-16gnu: tiled: Update to 1.1.2.David Thompson
* gnu/packages/game-development.scm (tiled): Update to 1.1.2.
2018-02-16gnu: mpv: Update to 0.28.2.Rutger Helling
* gnu/packages/video.scm (mpv): Update to 0.28.2.
2018-02-16gnu: perl-dbd-pg: Update to 3.7.4.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (perl-dbd-pg): Update to 3.7.4.
2018-02-16gnu: ristretto: Update to 0.8.2.Tobias Geerinckx-Rice
* gnu/packages/xfce.scm (ristretto): Update to 0.8.2.
2018-02-16gnu: opusfile: Update to 0.10.Tobias Geerinckx-Rice
* gnu/packages/xiph.scm (opusfile): Update to 0.10.
2018-02-16gnu: erlang: Update phase style.Tobias Geerinckx-Rice
* gnu/packages/erlang.scm (erlang)[arguments]: Substitute INVOKE for SYSTEM*, don't use %OUTPUTS, and end phases with #t.
2018-02-16gnu: erlang: Update to 20.2.3.Tobias Geerinckx-Rice
* gnu/packages/erlang.scm (erlang): Update to 20.2.3.
2018-02-16gnu: gkrellm: Update to 2.3.10.Tobias Geerinckx-Rice
* gnu/packages/gkrellm.scm (gkrellm): Update to 2.3.10. [arguments]: Remove X11_LIBS override.
2018-02-16gnu: gnustep: Update dockapps home pages.Tobias Geerinckx-Rice
* gnu/packages/gnustep.scm (wmbattery, wmclock, wmcpuload)[home-pages]: Use new dockapps.net domain.
2018-02-16gnu: gnustep: Update phase style.Tobias Geerinckx-Rice
* gnu/packages/gnustep.scm (windowmaker)[arguments]: Don't use %OUTPUT. End phases with #t. (wmbattery, wmclock)[arguments]: Substitute INVOKE for SYSTEM*. End phases with #t.
2018-02-16gnu: wmcpuload: Update to 1.1.1.Tobias Geerinckx-Rice
* gnu/packages/gnustep.scm (wmcpuload): Update to 1.1.1.
2018-02-16gnu: wmbattery: Update to 2.51.Tobias Geerinckx-Rice
* gnu/packages/gnustep.scm (wmbattery): Update to 2.51. [source]: Remove upstreamed bugfix snippet.
2018-02-16gnu: Use HTTPS for supported nongnu.org home pages.Tobias Geerinckx-Rice
* gnu/packages/acl.scm (acl)[home-page]: Use HTTPS. * gnu/packages/admin.scm (dmidecode)[home-page]: Likewise. * gnu/packages/attr.scm (attr)[home-page]: Likewise. * gnu/packages/audio.scm (lash)[home-page]: Likewise. * gnu/packages/avr.scm (avr-libc)[home-page]: Likewise. * gnu/packages/backup.scm (rdiff-backup, libchop)[home-page]: Likewise. * gnu/packages/compression.scm (fastjar, lzip, lziprecover, atool) (lunzip, clzip, lzlib, plzip)[home-page]: Likewise. * gnu/packages/emacs.scm (geiser, bbdb, m17n-lib, m17n-lib)[home-page]: Likewise. * gnu/packages/flashing-tools.scm (avrdude)[home-page]: Likewise. * gnu/packages/fontutils.scm (libotf)[home-page]: Likewise. * gnu/packages/game-development.scm (gzochi)[home-page]: Likewise. * gnu/packages/games.scm (enigma)[home-page]: Likewise. * gnu/packages/gsasl.scm (libntlm)[home-page]: Likewise. * gnu/packages/gtk.scm (guile-cairo)[home-page]: Likewise. * gnu/packages/guile.scm (guile-reader, guile-lib, guile-json) (guile-redis, g-wrap)[home-page]: Likewise. * gnu/packages/libunwind.scm (libunwind)[home-page]: Likewise. * gnu/packages/lout.scm (lout)[home-page]: Likewise. * gnu/packages/mpd.scm (sonata)[home-page]: Likewise. * gnu/packages/networking.scm (quagga)[home-page]: Likewise. * gnu/packages/ratpoison.scm (ratpoison)[home-page]: Likewise. * gnu/packages/skribilo.scm (skribilo)[home-page]: Likewise. * gnu/packages/telephony.scm (exosip)[home-page]: Likewise. * gnu/packages/texinfo.scm (texi2html)[home-page]: Likewise. * gnu/packages/xdisorg.scm (xbindkeys)[home-page]: Likewise.
2018-02-16gnu: plzip: Update to 1.7.Tobias Geerinckx-Rice
* gnu/packages/compression.scm (plzip): Update to 1.7.
2018-02-16gnu: lzlib: Update to 1.10.Tobias Geerinckx-Rice
* gnu/packages/compression.scm (lzlib): Update to 1.10.
2018-02-16gnu: clzip: Update to 1.10.Tobias Geerinckx-Rice
* gnu/packages/compression.scm (clzip): Update to 1.10.
2018-02-16gnu: lziprecover: Update to 1.20.Tobias Geerinckx-Rice
* gnu/packages/compression.scm (lziprecover): Update to 1.20.
2018-02-16gnu: pbzip2: Update to 1.1.13.Tobias Geerinckx-Rice
* gnu/packages/compression.scm (pbzip2): Update to 1.1.13.
2018-02-16gnu: lzop: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/compression.scm (lzop)[home-page]: Use HTTPS.
2018-02-16gnu: lzop: Update to 1.04.Tobias Geerinckx-Rice
* gnu/packages/compression.scm (lzop): Update to 1.04.
2018-02-16import: utils: 'alist->package' allows false license.Ludovic Courtès
Reported by <pkill9@runbox.com>. Fixes <https://bugs.gnu.org/30470>. * guix/import/utils.scm (alist->package): Check whether 'license' is false and set the 'license' field to #f in this case. * tests/import-utils.scm ("alist->package with false license"): New test.
2018-02-16gnu: ldc: Increase 'max-silent-time'.Ludovic Courtès
Reported by Pjotr Prins <pjotr.public12@thebird.nl>. * gnu/packages/ldc.scm (ldc-bootstrap)[properties]: New field.
2018-02-15gnu: quagga: Update to 1.2.3 [security fixes].Leo Famulari
See the advisories at <https://git.savannah.gnu.org/cgit/quagga.git/tree/doc/security?h=quagga-1.2.3> for more information about the security-related bugs fixed in this release. * gnu/packages/networking.scm (quagga): Update to 1.2.3.
2018-02-15gnu: python-botocore: Update to 1.8.43.David Thompson
* gnu/packages/python.scm (python-botocore): Update to 1.8.43.
2018-02-16pack: Adjust '--manifest' documentation.Ludovic Courtès
Reported by Konrad Hinsen <konrad.hinsen@fastmail.net>. * guix/scripts/pack.scm (show-help): Adjust --manifest documentation.
2018-02-15gnu: Add kholidays.Hartmut Goebel
* gnu/packages/kde.scm(kholidays): New variable.
2018-02-15gnu: java-fasterxml-jackson-dataformat-xml: Update to 2.9.4.Alex Vong
* gnu/packages/java.scm (java-fasterxml-jackson-dataformat-xml): Update to 2.9.4. Signed-off-by: Leo Famulari <leo@famulari.name>
2018-02-15gnu: java-fasterxml-jackson-dataformat-yaml: Update to 2.9.4.Alex Vong
* gnu/packages/java.scm (java-fasterxml-jackson-dataformat-yaml): Update to 2.9.4. Signed-off-by: Leo Famulari <leo@famulari.name>
2018-02-15gnu: java-fasterxml-jackson-modules-base-jaxb: Update to 2.9.4.Alex Vong
* gnu/packages/java.scm (java-fasterxml-jackson-modules-base-jaxb): Update to 2.9.4. Signed-off-by: Leo Famulari <leo@famulari.name>
2018-02-15gnu: java-fasterxml-jackson-databind: Update to 2.9.4 [fixes ↵Alex Vong
CVE-{2017-17485, 2018-5968}]. * gnu/packages/java.scm (java-fasterxml-jackson-databind): Update to 2.9.4. Signed-off-by: Leo Famulari <leo@famulari.name>
2018-02-15gnu: java-fasterxml-jackson-core: Update to 2.9.4.Alex Vong
* gnu/packages/java.scm (java-fasterxml-jackson-core): Update to 2.9.4. Signed-off-by: Leo Famulari <leo@famulari.name>
2018-02-15gnu: java-fasterxml-jackson-annotations: Update to 2.9.4.Alex Vong
* gnu/packages/java.scm (java-fasterxml-jackson-annotations): Update to 2.9.4. Signed-off-by: Leo Famulari <leo@famulari.name>
2018-02-16gnu: diamond: Update to 0.9.18.Ben Woodcroft
* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.18.
2018-02-15gnu: python-elasticsearch: Update to 6.1.1.Pjotr Prins
* gnu/packages/python-web.scm (python-elasticsearch, python2-elasticsearch): Update to 6.1.1. Signed-off-by: Leo Famulari <leo@famulari.name>
2018-02-15gnu: Add bpython.Hartmut Goebel
* gnu/packages/python.scm (bpython, bpython2): New variables.
2018-02-15gnu: Add python-curtsies.Hartmut Goebel
* gnu/packages/terminals.scm (python-curtsies, python2-curtsies): New variables.
2018-02-15gnu: Add python-blessings.Hartmut Goebel
* gnu/packages/terminals.scm (python-blessings, python2-blessings): New variables.
2018-02-15gnu: Add python-pyte.Hartmut Goebel
* gnu/packages/terminals.scm (python-pyte, python2-pyte): New variables.
2018-02-15gnu: irssi: Update to 1.1.1 [fixes CVE-2018-{7050,7051,7052,7053,7054}].Leo Famulari
* gnu/packages/irc.scm (irssi): Update to 1.1.1.
2018-02-15union: Wrap collisions with newlines.Oleg Pykhalov
* guix/build/union.scm (union-build): Wrap collisions with newlines.
2018-02-15gnu: Add epipe.Oleg Pykhalov
* gnu/packages/emacs.scm (epipe): New public variable.
2018-02-15gnu: ghc: Make memory allocator decommit memory on Linux < 4.5.Danny Milosavljevic
* gnu/packages/patches/ghc-8.0-fall-back-to-madv_dontneed.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/haskell.scm (ghc-8): Use it.
2018-02-15gnu: java-jeromq: Update to 0.4.3.Ricardo Wurmus
* gnu/packages/java.scm (java-jeromq): Update to 0.4.3. [arguments]: Disable DealerSpecTest.
2018-02-15gnu: java-testng: Update to 6.14.2.Ricardo Wurmus
* gnu/packages/java.scm (java-testng): Update to 6.14.2. [arguments]: Delete failing tests and those requiring groovy. [native-inputs]: Add java-mockito-1.
2018-02-15gnu: Add python-loompy.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-loompy): New variable.
2018-02-15gnu: Add r-dropbead.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-dropbead): New variable.
2018-02-15gnu: Add r-delayedmatrixstats.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-delayedmatrixstats): New variable.
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