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2015-07-07gnu: ruby: Remove custom 'rake gem' build phase from all gems.David Thompson
* gnu/packages/ruby.scm (ruby-hoe, ruby-rake-compiler, ruby-net-http-persistent, ruby-minitest, ruby-minitest-sprint, ruby-minitest-bacon): Remove custom 'rake gem' build phase that is now handled automatically by the Ruby build system.
2015-07-07build: ruby: Run 'rake gem' when gemspec is missing.pjotrp
* guix/build/ruby-build-system.scm (build): Run 'rake gem' when there is no gemspec in the source tree. Co-Authored-By: David Thompson <davet@gnu.org>
2015-07-07gnu: samtools: Update to 1.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (samtools): Update to 1.2.
2015-07-07gnu: pari-gp: Update to 2.7.4.Andreas Enge
* gnu/packages/algebra.scm (pari-gp): Update to 2.7.4.
2015-07-07gnu: icecat: Apply more libvpx-1.4 fixes.Mark H Weaver
This is a followup to commit c803ffcb3a9d5669bf5bae62b66fa058d697545c. * gnu/packages/patches/icecat-libvpx-1.4.patch: Augment existing patch to include fixes for content/media/encoder/VP8TrackEncoder.cpp.
2015-07-06gnu: icecat: Fix build against libvpx 1.4.Mark H Weaver
* gnu/packages/patches/icecat-libvpx-1.4.patch: New file. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/gnuzilla.scm (icecat)[source]: Add patch.
2015-07-06gnu: gst-plugins-good: Disable rtprtx tests that frequently fail.Mark H Weaver
* gnu/packages/gstreamer.scm (arguments): Add 'disable-failing-rtprtx-tests' phase.
2015-07-06gnu: libvpx: Update to 1.4.0.Mark H Weaver
* gnu/packages/patches/libvpx-fix-armhf-link.patch, gnu/packages/patches/libvpx-fix-ssse3-quantize.patch, gnu/packages/patches/libvpx-vp9-out-of-bounds-access.patch: Remove files. * gnu-system.am (dist_patch_DATA): Remove them. * gnu/packages/video.scm (libvpx): Update to 1.4.0. Remove patches. Update source URI.
2015-07-06gnu: libwmf: Fix CVE-2006-3376, CVE-2009-1364, CVE-2015-{0848,4588,4695,4696}.Mark H Weaver
* gnu/packages/patches/libwmf-CVE-2006-3376.patch, gnu/packages/patches/libwmf-CVE-2009-1364.patch, gnu/packages/patches/libwmf-CVE-2015-0848+4588+4695+4696.patch: New files. * gnu-system.am (dist_patch_DATA): Add them. * gnu/packages/image.scm (libwmf)[source]: Add patches.
2015-07-07substitute: Avoid infinite loop when updating the substitute list.Andy Patterson
Reported at <http://lists.gnu.org/archive/html/guix-devel/2015-07/msg00119.html>. * guix/scripts/substitute.scm (http-multiple-get): When RESP has "Connection: close", consume HEAD anyway; always call PROC to read from BODY. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2015-07-07daemon: Flush upon '\r' when reading the substituter's stderr.Ludovic Courtès
This commit had been inadvertently reverted in 322eeb8. * nix/libstore/local-store.cc (LocalStore::getLineFromSubstituter): Flush when the line contains '\r'.
2015-07-06build: Generate 'AUTHORS'.Alex Kost
* build-aux/generate-authors.scm: New file. * Makefile.am (gen-AUTHORS): New target. (dist-hook, .PHONY): Add it.
2015-07-06gnu: libreoffice: Update to 4.4.4.3.Andreas Enge
* gnu/packages/libreoffice.scm (libreoffice): Update to 4.4.4.3.
2015-07-06gnu: freeipmi: Update to 1.4.9.Ludovic Courtès
* gnu/packages/freeipmi.scm (freeipmi): Update to 1.4.9.
2015-07-06gnu: gcal: Update to 4.Ludovic Courtès
* gnu/packages/gcal.scm (gcal): Update to 4.
2015-07-06gnu: gxmessage: Update to 3.4.3.Ludovic Courtès
* gnu/packages/gxmessage.scm (gxmessage): Update to 3.4.3. [inputs]: Use GTK+ instead of GTK+-2.
2015-07-06gnu: guile-sdl: Update to 0.5.2.Ludovic Courtès
* gnu/packages/sdl.scm (guile-sdl): Update to 0.5.2. [arguments]: Augment 'fix-env-and-path' phase to modify 'test/Makefile.in'.
2015-07-05gnu: powertabeditor: Update to 2.0.0-alpha8.Ricardo Wurmus
* gnu/packages/music.scm (powertabeditor): Update to 2.0.0-alpha8.
2015-07-05gnu: powertabeditor: Enable tests.Ricardo Wurmus
* gnu/packages/music.scm (powertabeditor)[arguments]: Run "pte_tests" in "check" phase; add phase "fix-tests".
2015-07-05download: Reference tls instead of renamed gnutls module.Andreas Enge
* guix/download.scm (gnutls-package): Use new module name tls instead of gnutls.
2015-07-05gnu: Add LibreSSL.Andreas Enge
* gnu/packages/tls.scm (libressl): New variable.
2015-07-05gnu: Fix ambiguity between openssl package and license in tls module.Andreas Enge
* gnu/packages/tls.scm: Prefix imported licenses.
2015-07-05gnu: icecat: Add support for WebGL, CUPS, Hunspell, startup-notification, etc.Mark H Weaver
Also remove most bundled libraries from the source, add comments about libraries yet to be unbundled, explicitly link libxul.so with libraries that might try (and fail) to dlopen, and remove the h264parse gstreamer module from the blacklist. * gnu/packages/gnuzilla.scm (icecat)[source]: Add snippet. [inputs]: Add cups, gdk-pixbuf, glib, hunspell, libcanberra, libgnome, libxinerama, libxscrnsaver, mit-krb5, and startup-notification. [arguments]<#:configure-flags>: add "--enable-default-toolkit=cairo-gtk2", "--enable-pango", "--enable-gio", "--enable-svg", "--enable-canvas", "--enable-mathml", "--enable-startup-notification", "--disable-gnomevfs", "--disable-gconf", "--disable-gnomeui", and "--enable-system-hunspell". Remove outdated comment about "--with-system-bz2" not being used. <#:phases>: Use 'modify-phases'. Add 'remove-h264parse-from-blacklist' and 'arrange-to-link-libxul-with-libraries-it-might-dlopen' phases.
2015-07-05gnu: Move content of openssl module into tls module.Andreas Enge
* gnu/packages/openssl.scm (openssl, perl-net-ssleay): Move to... * gnu/packages/tls.scm: ...here. * gnu/packages/openssl.scm: Delete file. * gnu-system.am (GNU_SYSTEM_MODULES): Unregister deleted file. * gnu/packages/{admin.scm, bittorrent.scm, certs.scm, ci.scm, cyrus-sasl.scm, databases.scm, dns.scm, ebook.scm, enlightenment.scm, gnunet.scm, libreoffice.scm, links.scm, mail.scm, messaging.scm, networking.scm, ntp.scm, openldap.scm, package-management.scm, pdf.scm, python.scm, qt.scm, rdesktop.scm, rdf.scm, ruby.scm, ssh.scm, synergy.scm, tor.scm, version-control.scm, video.scm, vpn.scm, w3m.scm, web.scm, weechat.scm, xiph.scm}: Adapt module import.
2015-07-05gnu: Rename module gnutls to tls.Andreas Enge
* gnu/packages/gnutls.scm: Rename to... * gnu/packages/tls.scm: ... this. Change module name accordingly. * gnu/packages/{admin.scm, cups.scm, curl.scm, dc.scm, dns.scm, emacs.scm, ftp.scm, gnome.scm, gnunet.scm, gnupg.scm, gsasl.scm, lynx.scm, mail.scm, messaging.scm, package-management.scm, shishi.scm, task-management.scm, version-control.scm, video.scm, vpn.scm, webkit.scm, weechat.scm, wget.scm, wine.scm, xml.scm}: Adapt module import to new name. * gnu-system.am (GNU_SYSTEM_MODULES): Rename gnutls module to tls.
2015-07-05gnu: avidemux: Drop version 2.5.Andreas Enge
* gnu/packages/video.scm (avidemux-2.5): Delete variable.
2015-07-05gnu: Add prodigal.Ben Woodcroft
* gnu/packages/bioinformatics.scm (prodigal): New variable.
2015-07-04gnu: shogun: Build with install RPATH.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (shogun)[arguments]: Add configure flag to build with install RPATH.
2015-07-04gnu: englightenment: Use https URLs.Ludovic Courtès
* gnu/packages/enlightenment.scm (efl, elementary, emotion-generic-players, terminology, enlightenment): Use https instead of http since the latter redirects to the former.
2015-07-04gnu: enlightenment: Update to 0.19.5.Efraim Flashner
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.19.5.
2015-07-04gnu: emotion-generic-loaders: Update to 1.14.0.Efraim Flashner
* gnu/packages/enlightenment.scm (emotion-generic-loaders): Update to 1.14.0.
2015-07-04gnu: evas-generic-loaders: Update to 1.14.0.Efraim Flashner
* gnu/packages/enlightenment.scm (evas-generic-loaders): Update to 1.14.0.
2015-07-04gnu: elementary: Update to 1.14.2.Efraim Flashner
* gnu/packages/enlightenment.scm (elementary): Update to 1.14.2.
2015-07-04gnu: efl: Update to 1.14.2.Efraim Flashner
* gnu/packages/enlightenment.scm (efl): Update to 1.14.2.
2015-07-04gnu: Add ruby-rake-compiler.pjotrp
* gnu/packages/ruby.scm (ruby-rake-compiler): New variable.
2015-07-04gnu: eigen: Update to 3.2.5.Ricardo Wurmus
* gnu/packages/algebra.scm (eigen): Update to 3.2.5.
2015-07-04gnu: icecat: Fix CVE-2015-{2722,2724,2728,2733,2735,2736,2738,2739,2740,2743}.Mark H Weaver
* gnu/packages/patches/icecat-CVE-2015-2722-pt1.patch, gnu/packages/patches/icecat-CVE-2015-2722-pt2.patch, gnu/packages/patches/icecat-CVE-2015-2724-pt1.patch, gnu/packages/patches/icecat-CVE-2015-2724-pt2.patch, gnu/packages/patches/icecat-CVE-2015-2724-pt3.patch, gnu/packages/patches/icecat-CVE-2015-2724-pt4.patch, gnu/packages/patches/icecat-CVE-2015-2728-pt1.patch, gnu/packages/patches/icecat-CVE-2015-2728-pt2.patch, gnu/packages/patches/icecat-CVE-2015-2733-pt1.patch, gnu/packages/patches/icecat-CVE-2015-2733-pt2.patch, gnu/packages/patches/icecat-CVE-2015-2735.patch, gnu/packages/patches/icecat-CVE-2015-2736.patch, gnu/packages/patches/icecat-CVE-2015-2738.patch, gnu/packages/patches/icecat-CVE-2015-2739.patch, gnu/packages/patches/icecat-CVE-2015-2740.patch, gnu/packages/patches/icecat-CVE-2015-2743.patch: New files. * gnu-system.am (dist_patch_DATA): Add them. * gnu/packages/gnuzilla.scm (icecat)[source]: Add patches.
2015-07-04Add '.mailmap'.Alex Kost
* .mailmap: New file.
2015-07-04Clean up 'THANKS' and 'AUTHORS'.Alex Kost
* THANKS: Add Konrad Hinsen, Cyprien Nicolas, Yakkala Yagnesh Raghava and Alexander Shendi. Remove Federico Beffa, Marek Benc, John Darrington, rekado, Cyrill Schenkel and Andy Wingo because they are placed in AUTHORS. Move Amirouche Boubekki and Alex Kost to ... * AUTHORS: ... here. Add Arne Babenhauserheide, Ian Denhardt, Kevin Lemonnier, Mathieu Lirzin, Pierre-Antoine Rault and Ben Woodcroft. Fix some names and emails.
2015-07-03gnu: unrtf: Fix download location.Andreas Enge
* gnu/packages/unrtf.scm (unrtf): Fix download location.
2015-07-03gnu: r: Replace "atlas" with "openblas".Ricardo Wurmus
* gnu/packages/statistics.scm (r)[inputs]: Replace "atlas" with "openblas".
2015-07-03gnu: gnutls: Move man3 pages to "doc" output.Ludovic Courtès
* gnu/packages/gnutls.scm (gnutls)[arguments]: Add #:phases.
2015-07-03gnu: qt-4: Remove reference from "out" to "doc".Ludovic Courtès
* gnu/packages/qt.scm (qt-4)[arguments]: Remove '-docdir' configure flag. Add 'move-doc' phase.
2015-07-03gnu: qt-4: Use a more standard directory layout.Ludovic Courtès
* gnu/packages/qt.scm (qt-4)[arguments]: Pass -datadir, -importdir, -plugindir, and -translationdir.
2015-07-03gnu: qt-4: Use 'modify-phases'.Ludovic Courtès
* gnu/packages/qt.scm (qt-4)[arguments]: Use 'modify-phases' instead of 'alist-replace'.
2015-07-03gnu: cups-filter: Install backends and filters under lib/cups.Ludovic Courtès
This ensures that they are stripped during the 'strip' phase, thereby removing references to GCC and linux-libre-headers that would otherwise be found in debugging symbols. * gnu/packages/cups.scm (cups-filters)[source]: Change pkgbackenddir and pkgfilterdir to $(PREFIX)/lib/cups/{filter,backend}. (cups)[arguments]: Adjust accordingly.
2015-07-03gnu: mysql: Remove unnecessary binaries.Ludovic Courtès
This saves ~42 MiB on x86_64. * gnu/packages/databases.scm (mysql)[arguments]: Add 'remove-extra-binaries' phase.
2015-07-03gnu: mysql: Strip references and GCC and other build-time dependencies.Ludovic Courtès
* gnu/packages/databases.scm (mysql)[arguments]: Add 'strip-extra-references' phase.
2015-07-03gnu: mutt: Don't retain reference to GCC.Ludovic Courtès
* gnu/packages/patches/mutt-store-references.patch: New file. * gnu/packages/mail.scm (mutt)[source]: Use it. * gnu-system.am (dist_patch_DATA): Add it.
2015-07-03gnu: ghostscript: Add "doc" output.Ludovic Courtès
* gnu/packages/ghostscript.scm (ghostscript)[source](snippet): New field. [outputs]: New field. [arguments]: Add 'remove-doc-reference' phase.