Age | Commit message (Collapse) | Author |
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* gnu/packages/enlightenment.scm (enlightenment): Update to 0.22.2.
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* gnu/packages/openstack.scm (python-oslo.utils): Update to 3.36.0.
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* gnu/packages/openstack.scm (python-oslo.i18n): Update to 3.20.0.
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* gnu/packages/statistics.scm (r-withr): Update to 2.1.2.
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* gnu/packages/terminals.scm (tilda): Update to 1.4.1.
[arguments]: Rename 'autogen phase to 'bootstrap. Clean up 'bootstrap
phase.
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* gnu/packages/bioinformatics.scm (pigx-chipseq): Update to 0.0.8.
[inputs]: Add python-magic, python-xlrd, and trim-galore.
[arguments]: Disable tests.
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* gnu/packages/bioinformatics.scm (pigx-scrnaseq)[inputs]: Replace ghc-pandoc
with ghc-pandoc-1, and ghc-pandoc-citeproc with
ghc-pandoc-citeproc-with-pandoc-1.
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* gnu/packages/bioinformatics.scm (pigx-bsseq)[inputs]: Replace ghc-pandoc
with ghc-pandoc-1, and ghc-pandoc-citeproc with
ghc-pandoc-citeproc-with-pandoc-1.
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* gnu/packages/bioinformatics.scm (pigx-chipseq)[inputs]: Replace ghc-pandoc
with ghc-pandoc-1, and ghc-pandoc-citeproc with
ghc-pandoc-citeproc-with-pandoc-1.
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* gnu/packages/bioinformatics.scm (pigx-rnaseq)[inputs]: Replace ghc-pandoc
with ghc-pandoc-1, and ghc-pandoc-citeproc with
ghc-pandoc-citeproc-with-pandoc-1.
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* gnu/packages/haskell.scm (ghc-pandoc-citeproc-with-pandoc-1): New variable.
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* guix/git-download.scm (git-fetch)<build>: Fix match on INPUTS, which may
contain package outputs.
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* gnu/packages/cran.scm (r-abbyyr): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* guix/glob.scm (compile-glob-pattern): Rename to...
(string->sglob): ... this.
(compile-sglob, string->compiled-sglob): New procedures.
(glob-match?): Replace '?, 'range, and 'set with a single clause.
* tests/glob.scm (test-compile-glob-pattern): Rename to...
(test-string->sglob): ... this. Adjust accordingly.
(test-glob-match): Use 'string->compiled-sglob' instead of
'compile-glob-pattern'.
* gnu/build/linux-modules.scm (read-module-aliases): Use
'string->compiled-sglob' instead of 'compile-glob-pattern'.
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* guix/glob.scm (wildcard-indices): Remove.
(parse-bracket): New procedure.
(compile-glob-pattern): Rewrite. Support square brackets for sets and
ranges.
(glob-match?): Support sets and ranges.
* tests/glob.scm (test-compile-glob-pattern)
(test-glob-match): New macros.
Use them to rewrite the existing tests, and add new tests.
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* gnu/build/linux-modules.scm (load-linux-module*): Pass BLACK-LIST in
recursive call.
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* gnu/build/linux-modules.scm (current-kernel-directory): New procedure.
(current-alias-file): Use it.
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* gnu/system/vm.scm (expression->derivation-in-linux-vm): Pass
#:on-error to 'base-initrd'.
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* tests/elpa.scm (eval-test-with-elpa): Mock 'url-fetch'.
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Fixes <https://bugs.gnu.org/30836>.
Reported by Konrad Hinsen <konrad.hinsen@fastmail.net>.
* guix/import/elpa.scm (elpa-package->sexp): Add LICENSE parameter and
honor it.
(elpa->guix-package): Pass 'license:gpl3+ only when REPO is 'gnu.
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This is a followup to 44dd3d579db3aa467e41d0b431029e46cae8e12d.
* tests/elpa.scm (eval-test-with-elpa): Use https.
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* gnu/packages/video.scm (youtube-dl): Update to 2018.03.14.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/gnome.scm (shotwell): Update to 0.28.0.
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* gnu/packages/ruby.scm (ruby-ruby-engine): New variable.
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* gnu/packages/ruby.scm (ruby-rake): New variable.
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* gnu/packages/ruby.scm (ruby-erubis): New variable.
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* gnu/packages/ruby.scm (ruby-sporkmonger-rack-mount): New variable.
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* gnu/packages/ruby.scm (ruby-creole): New variable.
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* gnu/packages/ruby.scm (ruby-contest): New variable.
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* gnu/packages/ruby.scm (ruby-rack-protection): New variable.
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* gnu/packages/ruby.scm (ruby-rack-test): New variable.
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* gnu/packages/ruby.scm (ruby-asciidoctor): New variable.
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* gnu/packages/maths.scm (ruby-asciimath): New variable.
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Includes fixes for CVE-2018-5146 and CVE-2018-5147.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add selected fixes from
the upstream mozilla-esr52 repository.
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* gnu/packages/terraform.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
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* gnu/packages/golang.scm (go-github-com-hashicorp-hcl): New variable.
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* gnu/packages/golang.scm (go-github-com-tj-docopt): New variable.
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Fixes <https://bugs.gnu.org/30716>.
Reported by Björn Höfling <bjoern.hoefling@bjoernhoefling.de>.
* guix/git.scm (switch-to-ref): When REF is a commit, check the length
of COMMIT and use 'object-lookup-prefix' if available.
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* gnu/packages/guile.scm (guile-git): Update to 2bb9fbb.
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Fixes <https://bugs.gnu.org/30613>.
Regression introduced in 550f4509acf2c0f67882260414b0bb2843e07465.
Reported by George myglc2 Clemmer <myglc2@gmail.com>.
* gnu/packages/avahi.scm (nss-mdns)[arguments]: Remove
#:configure-flags. Add #:phases.
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* gnu/packages/datamash.scm (datamash): Update to 1.3.
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* gnu/packages/fvwm.scm (fvwm)[arguments]: Add new phase to create '.desktop' file.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* guix/import/elpa.scm: Fix typos in docstrings.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* guix/import/elpa.scm (elpa-url): Use HTTPS.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/services/ssh.scm (<openssh-configuration>)[accepted-environment]: New field.
(openssh-config-file): Honor 'acccepted-environment'.
* doc/guix.texi (Networking Services): Document it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/patches/javas-simple-xml-fix-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/java.scm (java-simple-xml)[source](patches): Add it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/vulkan.scm (shaderc)[version]: Remove extra '-'.
[arguments]: Remove extra 'mkdir-p' calls and refer to inputs directly.
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This reverts commit 9bc0591bc11190ac49c8ea3cf44c4903c924f6c7.
This commit broke 'shaderc'.
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* gnu/packages/monitoring.scm (python-prometheus-client,
python2-prometheus-client): New variables.
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In the postgresql-config-file gexp compiler.
* gnu/services/databases.scm (postgresql-config-file-compiler): Change quote'
to single-quote.
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