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2018-11-09gnu: r-sn: Update to 1.5-3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-sn): Update to 1.5-3.
2018-11-09gnu: r-rgooglemaps: Update to 1.4.3.Ricardo Wurmus
* gnu/packages/geo.scm (r-rgooglemaps): Update to 1.4.3.
2018-11-09gnu: r-tmb: Update to 1.7.15.Ricardo Wurmus
* gnu/packages/cran.scm (r-tmb): Update to 1.7.15.
2018-11-09gnu: r-jomo: Update to 2.6-5.Ricardo Wurmus
* gnu/packages/cran.scm (r-jomo): Update to 2.6-5. [propagated-inputs]: Add r-mass.
2018-11-09gnu: r-rcpp: Update to 1.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcpp): Update to 1.0.0. [native-inputs]: Add r-knitr.
2018-11-09gnu: Add r-arm.Ricardo Wurmus
* gnu/packages/cran.scm (r-arm): New variable.
2018-11-09gnu: Add r-feature.Ricardo Wurmus
* gnu/packages/cran.scm (r-feature): New variable.
2018-11-09gnu: Add r-ks.Ricardo Wurmus
* gnu/packages/cran.scm (r-ks): New variable.
2018-11-09gnu: Add r-misc3d.Ricardo Wurmus
* gnu/packages/cran.scm (r-misc3d): New variable.
2018-11-09gnu: Add r-multicool.Ricardo Wurmus
* gnu/packages/cran.scm (r-multicool): New variable.
2018-11-09gnu: Add r-rgl.Ricardo Wurmus
* gnu/packages/cran.scm (r-rgl): New variable.
2018-11-09gnu: Add r-destiny.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-destiny): New variable.
2018-11-09gnu: Add r-h5.Ricardo Wurmus
* gnu/packages/cran.scm (r-h5): New variable.
2018-11-09gnu: Add r-aggregation.Ricardo Wurmus
* gnu/packages/cran.scm (r-aggregation): New variable.
2018-11-09gnu: Add r-savr.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-savr): New variable.
2018-11-09gnu: r-with-tests: Update to 3.5.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-with-tests): Update to 3.5.1.
2018-11-09gnu: r-with-tests: Use INVOKE.Ricardo Wurmus
* gnu/packages/statistics.scm (r-with-tests)[arguments]: Use INVOKE and return #T unconditionally.
2018-11-09gnu: Add emacs-gtk-look.Pierre Neidhardt
* gnu/packages/emacs.scm (emacs-gtk-look): New variable.
2018-11-09gnu: Add xmlrpc-c.Pierre Neidhardt
* gnu/packages/xml.scm (xmlrpc-c): New variable.
2018-11-09gnu: guile-newt: Update to revision 1.Mathieu Othacehe
* gnu/packages/guile.scm (guile-newt): Update to revision 1.
2018-11-09gnu: powertabeditor: Fetch sources from git.Ricardo Wurmus
* gnu/packages/music.scm (powertabeditor)[source]: Fetch from git.
2018-11-09gnu: powertabeditor: Use INVOKE.Ricardo Wurmus
* gnu/packages/music.scm (powertabeditor)[arguments]: Use INVOKE and return #T unconditionally.
2018-11-09gnu: wxmaxima: Update to 18.10.1.Kei Kebreau
* gnu/packages/maths.scm (wxmaxima): Update to 18.10.1. [source]: Update URL and remove patch. * gnu/packages/patches/wxmaxima-do-not-use-old-gnuplot-parameters.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove patch.
2018-11-08gnu: PostgreSQL 9: Update to 9.6.11 [fixes CVE-2018-16850].Leo Famulari
* gnu/packages/databases.scm (postgresql-9.6): Update to 9.6.11.
2018-11-08gnu: Add emacs-clang-format.Pierre Neidhardt
* gnu/packages/emacs.scm (emacs-clang-format): New variable.
2018-11-08gnu: kodi: Update to 18.0b5.Efraim Flashner
* gnu/packages/kodi.scm (kodi): Update to 18.0b5. [source]: Update snippet. [inputs]: Add flatbuffers, fstrcmp. (crossguid): Update to commit fef89a4174a7bf8cd99fa9154864ce9e8e3bf989. (libdvdnav/kodi, libdvdread/kodi): Update to 6.0.0-Leia-Alpha-3. (libdvdcss/kodi): Update to 1.4.2-Leia-Beta-5.
2018-11-08gnu: Add fstrcmp.Efraim Flashner
* gnu/packages/kodi.scm (fstrcmp): New variable.
2018-11-08doc: Add index entries.Laura Lazzati
* doc/guix.texi: Added various cindex tags to assist readers. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-08services: elogind: Fix spelling errors of left value fields in elogind ↵Stefan Stefanović
config file. * gnu/services/desktop.scm (elogind-configuration-file)[ini-file]: Fix spelling of left value fields: InhibitDelayMaxSecs, HoldoffTimeoutSecs, IdleActionSeconds, RemoveIpc. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-08gnu: python-ilinkedlist: Update to 0.3.1.Luther Thompson
* gnu/packages/python.scm (python-ilinkedlist): Update to 0.3.1. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-08gnu: Add python-pyelftools.Vagrant Cascadian
* gnu/packages/python.scm (python-pyelftools): New public variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-08gnu: libmusicbrainz: Use INVOKE.Ricardo Wurmus
* gnu/packages/music.scm (libmusicbrainz)[arguments]: Use INVOKE and return #T unconditionally.
2018-11-08gnu: pd: Remove custom autoconf phase.Ricardo Wurmus
* gnu/packages/music.scm (pd)[arguments]: Remove custom autoconf phase.
2018-11-08gnu: cmus: Fetch sources from git.Ricardo Wurmus
* gnu/packages/music.scm (cmus)[source]: Fetch from git.
2018-11-08gnu: cmus: Use INVOKE.Ricardo Wurmus
* gnu/packages/music.scm (cmus)[arguments]: Use INVOKE and return #T unconditionally.
2018-11-08gnu: pcc: Use INVOKE.Ricardo Wurmus
* gnu/packages/c.scm (pcc)[arguments]: Use INVOKE and return #T unconditionally.
2018-11-08gnu: pplacer-scripts: Use INVOKE.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (pplacer-scripts)[arguments]: Use INVOKE and return #T unconditionally.
2018-11-08gnu: roary: Use INVOKE.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (roary)[arguments]: Use INVOKE and return #T unconditionally.
2018-11-08gnu: seek: Use INVOKE.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (seek)[arguments]: Use INVOKE and return #T unconditionally; patch "gen_tools_am" shebang in "bootstrap" phase.
2018-11-08gnu: sailfish: Use INVOKE.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (sailfish)[arguments]: Use INVOKE instead of SYSTEM*.
2018-11-08gnu: vsearch: Update to 2.9.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.9.1. * gnu/packages/patches/vsearch-unbundle-cityhash.patch: Update.
2018-11-08gnu: sra-tools: Update to 2.9.3.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (sra-tools): Update to 2.9.3. [arguments]: Remove build phase patch-away-glibc-conflict.
2018-11-08gnu: plink-ng: Fetch sources from git.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (plink-ng)[source]: Fetch from git.
2018-11-08gnu: ncbi-vdb: Update to 2.9.3.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (ncbi-vdb): Update to 2.9.3.
2018-11-08gnu: ngs-sdk: Update to 2.9.3.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (ngs-sdk): Update to 2.9.3.
2018-11-08gnu: ngs-sdk: Use INVOKE.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (ngs-sdk)[arguments]: Use INVOKE and return #T unconditionally.
2018-11-08gnu: emboss: Use INVOKE.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (emboss)[arguments]: Use INVOKE and return #T unconditionally.
2018-11-08gnu: taxtastic: Use INVOKE.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (taxtastic)[arguments]: Use INVOKE and return #T unconditionally.
2018-11-08gnu: sra-tools: Use INVOKE.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (sra-tools)[arguments]: Use INVOKE and return #T unconditionally.
2018-11-08gnu: muscle: Use INVOKE.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (muscle)[arguments]: Use INVOKE and return #T unconditionally.
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