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2019-03-07gnu: r-bigrquery: Update to 1.1.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-bigrquery): Update to 1.1.0. [propagated-inputs]: Add r-bit64.
2019-03-07gnu: r-gmp: Update to 0.5-13.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-gmp): Update to 0.5-13.4.
2019-03-07gnu: r-huge: Update to 1.3.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-huge): Update to 1.3.0. [propagated-inputs]: Add r-rcpp and r-rcppeigen; remove r-lattice.
2019-03-07gnu: r-igraph: Update to 1.2.4.Ricardo Wurmus
* gnu/packages/graph.scm (r-igraph): Update to 1.2.4.
2019-03-07gnu: r-dplyr: Update to 0.8.0.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-dplyr): Update to 0.8.0.1. [native-inputs]: Move r-rcpp and r-bh from here... [propagated-inputs]: ...to here; remove r-bindrcpp.
2019-03-07gnu: r-lme4: Update to 1.1-21.Ricardo Wurmus
* gnu/packages/statistics.scm (r-lme4): Update to 1.1-21. [native-inputs]: Move r-rcpp and r-rcppeigen from here... [propagated-inputs]: ...to here; add r-boot.
2019-03-07gnu: r-forcats: Update to 0.4.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-forcats): Update to 0.4.0. [propagated-inputs]: Add r-ellipsis.
2019-03-07gnu: r-r6: Update to 2.4.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-r6): Update to 2.4.0.
2019-03-07gnu: r-formatr: Update to 1.6.Ricardo Wurmus
* gnu/packages/statistics.scm (r-formatr): Update to 1.6.
2019-03-07gnu: r-evaluate: Update to 0.13.Ricardo Wurmus
* gnu/packages/statistics.scm (r-evaluate): Update to 0.13.
2019-03-07gnu: r-mgcv: Update to 1.8-27.Ricardo Wurmus
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-27.
2019-03-07gnu: r-stringi: Update to 1.3.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-stringi): Update to 1.3.1.
2019-03-07gnu: r-stringr: Update to 1.4.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-stringr): Update to 1.4.0.
2019-03-07gnu: r-ranger: Update to 0.11.2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-ranger): Update to 0.11.2.
2019-03-07gnu: r-openssl: Update to 1.2.2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-openssl): Update to 1.2.2.
2019-03-07gnu: r-catools: Update to 1.17.1.2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-catools): Update to 1.17.1.2.
2019-03-07gnu: r-xml: Update to 3.98-1.19.Ricardo Wurmus
* gnu/packages/statistics.scm (r-xml): Update to 3.98-1.19.
2019-03-07gnu: r-flexmix: Update to 2.3-15.Ricardo Wurmus
* gnu/packages/statistics.scm (r-flexmix): Update to 2.3-15.
2019-03-07gnu: r-irlba: Update to 2.3.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-irlba): Update to 2.3.3.
2019-03-07gnu: r-registry: Update to 0.5-1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-registry): Update to 0.5-1.
2019-03-07gnu: r-r-utils: Update to 2.8.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-r-utils): Update to 2.8.0.
2019-03-07gnu: r-r-rsp: Update to 0.43.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-r-rsp): Update to 0.43.1.
2019-03-07gnu: r-mvtnorm: Update to 1.0-10.Ricardo Wurmus
* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.0-10.
2019-03-07gnu: r-tidyr: Update to 0.8.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-tidyr): Update to 0.8.3.
2019-03-07gnu: r-purrr: Update to 0.3.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-purrr): Update to 0.3.1.
2019-03-07gnu: r-pbapply: Update to 1.4-0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-pbapply): Update to 1.4-0.
2019-03-07gnu: r-vgam: Update to 1.1-1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-vgam): Update to 1.1-1.
2019-03-07gnu: r-ggthemes: Update to 4.1.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-ggthemes): Update to 4.1.0.
2019-03-07gnu: r-shiny: Update to 1.2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-shiny): Update to 1.2.0. [arguments]: Adjust processing of minified JavaScript.
2019-03-07gnu: r-epi: Update to 2.35.Ricardo Wurmus
* gnu/packages/cran.scm (r-epi): Update to 2.35.
2019-03-07gnu: r-network: Update to 1.14-377.Ricardo Wurmus
* gnu/packages/cran.scm (r-network): Update to 1.14-377. [propagated-inputs]: Add r-magrittr and r-tibble.
2019-03-07gnu: r-vegan: Update to 2.5-4.Ricardo Wurmus
* gnu/packages/cran.scm (r-vegan): Update to 2.5-4.
2019-03-07gnu: r-future-apply: Update to 1.2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-future-apply): Update to 1.2.0.
2019-03-07gnu: Add r-furrr.Ricardo Wurmus
* gnu/packages/cran.scm (r-furrr): New variable.
2019-03-07gnu: Add r-survey.Ricardo Wurmus
* gnu/packages/cran.scm (r-survey): New variable.
2019-03-07gnu: Add r-magick.Ricardo Wurmus
* gnu/packages/cran.scm (r-magick): New variable.
2019-03-07gnu: Add r-ellipsis.Ricardo Wurmus
* gnu/packages/cran.scm (r-ellipsis): New variable.
2019-03-07gnu: Add autorandr.Pierre Neidhardt
* gnu/packages/xdisorg.scm (autorandr): New variable.
2019-03-07gnu: php: Update to 7.3.3.Julien Lepiller
* gnu/packages/php.scm (php): Update to 7.3.3.
2019-03-07gnu: libmicrohttpd: Enable parallel tests.Efraim Flashner
* gnu/packages/gnunet.scm (libmicrohttpd)[arguments]: Don't disable parallel tests.
2019-03-07gnu: libmicrohttpd: Update to 0.9.63.Efraim Flashner
* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.63. [arguments]: Remove custom phase to add missing LDFLAGS.
2019-03-07gnu: c-graph: Update to 2.0.1.Efraim Flashner
* gnu/packages/maths.scm (c-graph): Update to 2.0.1.
2019-03-07activation: Build account databases with (gnu build accounts).Ludovic Courtès
* gnu/build/activation.scm (enumerate, current-users, current-groups) (add-group, add-user, modify-user, ensure-user): Remove. (activate-users+groups)[touch, activate-user]: Remove. [make-home-directory]: New procedure. Rewrite in terms of 'user+group-databases', 'write-group', etc. * gnu/build/install.scm (directives): Remove "/root". * gnu/system/shadow.scm (account-activation): Remove (setenv "PATH" ...) expression, which is now unneeded.
2019-03-07Add (gnu build accounts).Ludovic Courtès
* gnu/build/accounts.scm, tests/accounts.scm: New files. * Makefile.am (SCM_TESTS): Add tests/accounts.scm. * gnu/local.mk (GNU_SYSTEM_MODULES): Add build/accounts.scm.
2019-03-07activation: Operate on <user-account> and <user-group> records.Ludovic Courtès
* gnu/system/accounts.scm (sexp->user-group, sexp->user-account): New procedures. * gnu/system/shadow.scm (account-activation): Call them in the arguments to 'activate-users+groups'. (account-shepherd-service): Likewise. * gnu/build/activation.scm (activate-users+groups): Expect a list of <user-account> and a list of <user-group>. Replace uses of 'match' on tuples with calls to record accessors. (activate-user-home): Likewise.
2019-03-07system: Add (gnu system accounts).Ludovic Courtès
The (gnu system accounts) module is meant to be used both on the build- and on the host-side. * gnu/system/shadow.scm <top level>: Call 'default-shell'. (<user-account>, <user-group>): Move to... * gnu/system/accounts.scm: ... here. New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add system/accounts.scm.
2019-03-07gnu: fuseiso: Fix typo in description.Pierre Neidhardt
* gnu/packages/linux.scm (fuseiso)[description]: Fix typo.
2019-03-07gnu: Add nullmailer.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (nullmailer): New public variable.
2019-03-07gnu: neovim: Let build phase return #T.Ricardo Wurmus
* gnu/packages/vim.scm (neovim)[arguments]: Return #T from "patch-tic" phase.
2019-03-07gnu: cd-hit: Support longer sequences.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (cd-hit)[arguments]: Pass MAX_SEQ to make flags.
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