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2020-04-30gnu: python2-warpedlmm: Fix build.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python2-warpedlmm)[propagated-inputs]: Add python2-weave. [arguments]: Disable tests and add "use-weave" phase.
2020-04-30gnu: Add python2-weave.Ricardo Wurmus
* gnu/packages/python-science.scm (python2-weave): New variable.
2020-04-30gnu: Add r-rserve.Eric Brown
* gnu/packages/cran.scm (r-rserve): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-04-30gnu: gnuradio: Fix runtime python environment for plugins.Guillaume Le Vaillant
* gnu/packages/radio.scm (gnuradio)[native-search-paths]: Add PYTHONPATH. [native-inputs]: Move python ... [inputs]: ... here.
2020-04-29gnu: linux-libre: Update to 5.4.36.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.36. (linux-libre-5.4-pristine-source): Update hash.
2020-04-29gnu: linux-libre@5.6: Update to 5.6.8.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-5.6-version): Update to 5.6.8. (linux-libre-5.6-pristine-source): Update hash.
2020-04-29gnu: linux-libre@4.19: Update to 4.19.119.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.119. (linux-libre-4.19-pristine-source): Update hash.
2020-04-30gnu: python-hacking: Update to 1.1.0.Ricardo Wurmus
* gnu/packages/openstack.scm (python-hacking): Update to 1.1.0. [arguments]: Add "delete-broken-test" phase. [propagated-inputs]: Replace python-flake8-2.5 with python-flake8-2.6.
2020-04-30gnu: python-flake8-2.5: Update to 2.6.2.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-flake8-2.5): Update to 2.6.2; rename it... (python-flake8-2.6): ...to this. [arguments]: Add phase "use-later-pycodestyles", and move "check" phase after "install". [propagated-inputs]: Explicitly list python-pycodestyle, python-entrypoints, python-pyflakes-1.2, and python-mccabe.
2020-04-30gnu: Remove python2-flake8-2.5.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python2-flake8-2.5): Remove variable. (python-flake8-2.5)[properties]: Remove.
2020-04-30gnu: Replace python-pyflakes-0.8.1 with python-pyflakes-1.2.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-pyflakes-0.8.1): Remove variable. (python-pyflakes-1.2): New variable. * gnu/packages/openstack.scm (python-hacking)[propagated-inputs]: Replace python-pyflakes-0.8.1 with python-pyflakes-1.2.
2020-04-30gnu: Remove python2-pyflakes-0.8.1.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python2-pyflakes-0.8.1): Remove variable.
2020-04-30gnu: Add python-cmd2.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-cmd2): New variable.
2020-04-30gnu: Add python-voluptuous.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-voluptuous): New variable.
2020-04-30gnu: python-psutil: Update to 5.7.0.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-psutil): Update to 5.7.0.
2020-04-30doc: cookbook: Rename stumpwm package to current state.Marcin Karpezo
* doc/guix-cookbook.texi (StumpWM): Rename STUMPWM package to current state. Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2020-04-30gnu: Add sbcl-stumpwm-pass.Marcin Karpezo
* gnu/packages/wm.scm (sbcl-stumpwm-pass): New variable. Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2020-04-29gnu: Magic Wormhole: Update to 0.12.0.Leo Famulari
* gnu/packages/magic-wormhole.scm (magic-wormhole): Update to 0.12.0.
2020-04-29gnu: magic-wormhole-transit-relay: Update to 0.2.1.Leo Famulari
* gnu/packages/magic-wormhole.scm (magic-wormhole-transit-relay): Update to 0.2.1.
2020-04-29gnu: magic-wormhole-mailbox-server: Update to 0.4.1.Leo Famulari
* gnu/packages/magic-wormhole.scm (magic-wormhole-mailbox-server): Update to 0.4.1.
2020-04-29gnu: Add aspell-dict-pl.Marcin Karpezo
* gnu/packages/aspell.scm (aspell-dict-pl): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-04-29gnu: python-tortoise-orm: Update to 0.16.7 [security fixes].Lars-Dominik Braun
* gnu/packages/databases.scm (python-tortoise-orm)[source]: Update to 0.16.7. [propagated-inputs]: Propagate python-ciso8601, which is required in setup.py. Signed-off-by: Leo Famulari <leo@famulari.name>
2020-04-29gnu: python-pypika: Update to 0.37.2.Lars-Dominik Braun
* gnu/packages/databases.scm (python-pypika): Update to 0.37.2. Signed-off-by: Leo Famulari <leo@famulari.name>
2020-04-29gnu: python-aiosqlite: Update to 0.12.0.Lars-Dominik Braun
* gnu/packages/databases.scm (python-aiosqlite): Update to 0.12.0. Signed-off-by: Leo Famulari <leo@famulari.name>
2020-04-29gnu: OpenLDAP: Update to 2.4.50 [fixes CVE-2019-{13057,13565}].Leo Famulari
* gnu/packages/openldap.scm (openldap)[replacement]: Use openldap-2.4.50. (openldap/fixed): Replace with ... (openldap-2.4.50): ... new variable. * gnu/packages/patches/openldap-CVE-2020-12243.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2020-04-29gnu: foo2zjs: Update to 20200426.Tobias Geerinckx-Rice
* gnu/packages/cups.scm (foo2zjs): Update to 20200426.
2020-04-29gnu: emacs-vterm: Update to 0-1.e63bd65.Oleg Pykhalov
* gnu/packages/emacs-xyz.scm (emacs-vterm): Update to 0-1.e63bd65.
2020-04-29gnu: Add emacs-kakoune.pinoaffe
* gnu/packages/emacs-xyz.scm (emacs-kakoune): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-29gnu: Add emacs-ryo-modal.pinoaffe
* gnu/packages/emacs-xyz.scm (emacs-ryo-modal): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-29gnu: Add emacs-twittering-mode.Masaya Tojo
* gnu/packages/emacs-xyz.scm (emacs-twittering-mode): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-29tests: install: Fix device usage.Mathieu Othacehe
This is a follow-up of a860eddbbddeae5d3b6fe084e29ac9fafd2d6f02. Guided installation tests are now run from an ISO image. Hence the main block device is vda and not vdb anymore. * gnu/tests/install.scm (installation-target-os-for-gui-tests): Use %minimal-os-on-vda instead of %minimal-os. (%minimal-os-on-vda): Make sure that it replicates the config of %minimal-os.
2020-04-29gnu: Add python-sphinx-autobuild.Ricardo Wurmus
* gnu/packages/sphinx.scm (python-sphinx-autobuild): New variable.
2020-04-29gnu: Add python-doc8.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-doc8): New variable.
2020-04-29gnu: Add python-livereload.Ricardo Wurmus
* gnu/packages/python-web.scm (python-livereload): New variable.
2020-04-29gnu: Add python-port-for.Ricardo Wurmus
* gnu/packages/python-web.scm (python-port-for): New variable.
2020-04-29gnu: Add python-restructuredtext-lint.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-restructuredtext-lint): New variable.
2020-04-29gnu: gnome-calendar: Propagate evolution-data-server.Raghav Gururajan
* gnu/packages/gnome.scm (gnome-calendar)[inputs]: Move evolution-data-server from here... [propagated-inputs]: ...to here. Fixes <https://bugs.gnu.org/40686>. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-04-29gnu: Remove python2-ws4py-for-kaldi-gstreamer-server.Ricardo Wurmus
* gnu/packages/python-web.scm (python2-ws4py-for-kaldi-gstreamer-server): Remove variable.
2020-04-29gnu: kaldi-gstreamer-server: Update to 0-2.f68cab4.Ricardo Wurmus
* gnu/packages/machine-learning.scm (kaldi-gstreamer-server): Update to 0-2.f68cab4. [inputs]: Replace python-2 with python-wrapper, python2-pygobject with python-pygobject, python2-pyyaml with python-pyyaml, and python2-tornado with python-tornado; remove python2-ws4py-for-kaldi-gstreamer-server and python2-futures.
2020-04-29gnu: Add edid-decode.Brice Waegeneire
* gnu/packages/hardware.scm (edid-decode): New variable. Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
2020-04-29gnu: zrythm: Update to 0.8.333.Alexandros Theodotou
* gnu/packages/music.scm (zrythm): Update to 0.8.333. [inputs]: Add new dependencies graphviz and gtksourceview. Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
2020-04-29gnu: ikiwiki: Update to 3.20200202.3.Paul Garlick
* gnu/packages/web.scm (ikiwiki): Update to 3.20200202.3.
2020-04-29gnu: ikiwiki: Translate documentation.Paul Garlick
* gnu/packages/web.scm (ikiwiki)[inputs]: Add po4a. [arguments]<#:phases>[patch-Makefile]: Rename to... [arguments]<#:phases>[patch-Makefiles]: ...this. Add build environment paths to the PERL5LIB environment variable that is used by the 'po2wiki' script.
2020-04-29gnu: ikiwiki: Add missing inputs.Paul Garlick
* gnu/packages/web.scm (ikiwiki)[inputs]: Add perl-authen-passphrase, perl-file-mimeinfo, perl-mail-sendmail and perl-xml-twig.
2020-04-29gnu: ikiwiki: Propagate some inputs.Paul Garlick
* gnu/packages/web.scm (ikiwiki)[inputs]: Move perl-html-parser, perl-html-scrubber, perl-html-template, perl-json, perl-text-markdown-discount, perl-uri and perl-yaml-libyaml to... [propagated-inputs]: ...here. New field.
2020-04-29gnu: ikiwiki: Build perl inputs for target architecture.Paul Garlick
* gnu/packages/web.scm (ikiwiki)[native-inputs]: Move perl dependencies ... [inputs]: ...to here.
2020-04-29gnu: ikiwiki: Fetch sources from git repository.Paul Garlick
* gnu/packages/web.scm (ikiwiki)[source]: Use GIT-FETCH and GIT-FILE-NAME. [source](snippet): New field. [arguments]<#:phases>[set-modification-times]: New phase.
2020-04-29gnu: gnuradio: Fix search paths for third-party blocks.Guillaume Le Vaillant
* gnu/packages/radio.scm (gnuradio)[native-search-paths]: Add definition of the GRC_BLOCKS_PATH variable.
2020-04-29tests: install: Fix gui-installed-os test.Mathieu Othacehe
This is a follow-up of a860eddbbddeae5d3b6fe084e29ac9fafd2d6f02. If using an ISO, the main disk is vda and not vdb anymore. * gnu/tests/install.scm (installation-target-os-for-gui-tests): Use vda2 as swap partition.
2020-04-29tests: install: Increase virtual machine RAM.Mathieu Othacehe
It seems that 'guix system init' is consuming more than the 800M of RAM currently allocated. Until this is understood, bump the limit to 1.2G. Reported here: https://lists.gnu.org/archive/html/bug-guix/2020-04/msg00519.html * gnu/tests/install.scm (run-install): Bump RAM to 1.2G.