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2024-01-02gnu: emacs-ebib: Update to 2.40.3.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-ebib): Update to 2.40.3. [propagated-inputs]: Add EMACS-COMPAT. Change-Id: I7d37822ee5c41f5155ceb8e6b518a86dfcc9b5b3
2024-01-02gnu: emacs-docker: Update to 2.3.1.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-docker): Update to 2.3.1. Change-Id: Ib463a11ce6295118a846692b480edc4464a80d8f
2024-01-02gnu: emacs-denote: Update to 2.2.0.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-denote): Update to 2.2.0. Change-Id: I0552023075748b859dff361794726b7955873d0d
2024-01-02gnu: emacs-corfu: Update to 1.1.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-corfu): Update to 1.1. Change-Id: Ic2737697cfe4f5005172e05ab5d7343eb9f0ca23
2024-01-02gnu: emacs-consult-flycheck: Update to 1.0.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-consult-flycheck): Update to 1.0. Change-Id: Ic52b212be42f59f70365d907d6b8992b7fc1101e
2024-01-02gnu: emacs-consult: Update to 1.1.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-consult): Update to 1.1. Change-Id: I303c64cef5419be1b8ff66a30ca9b7f8f44ccfa1
2024-01-02gnu: emacs-code-cells: Update to 0.4.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-code-cells): Update to 0.4. Change-Id: Iac21fa3441fc85387ebc3d404205bd4f8716359f
2024-01-02gnu: emacs-clojure-mode: Update to 5.18.1.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-clojure-mode): Update to 5.18.1. Change-Id: I374f3ebca45fdce8ed84036fe999ace26d73c1ea
2024-01-02gnu: emacs-clj-refactor: Update to 3.11.2.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-clj-refactor): Update to 3.11.2. Change-Id: I338a2a8a172d5ea486f1d693b7a8c52cca3ec1f7
2024-01-02gnu: emacs-cider: Update to 1.12.0.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-cider): Update to 1.12.0. Change-Id: Icc26d1b51125913009e425279d59db123d3722e1
2024-01-02gnu: emacs-cape: Update to 1.1.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-cape): Update to 1.1. Change-Id: I7b2c1c415e62d4c13d0f3d5b946d93423dc08fb4
2024-01-02gnu: emacs-async: Run tests.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-async)[arguments]: Run tests. [native-inputs]: Add EMACS-BUTTERCUP. Change-Id: Ifa442644dbd259afb5584fbb4160a8b2346a6364
2024-01-02gnu: emacs-async: Update to 1.9.8.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-async): Update to 1.9.8. Change-Id: I2b83724cee2f77d49417c104f7ab0bf299c671ea
2024-01-02gnu: emacs-buttercup: Update to 1.33.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-buttercup): Update to 1.33. Change-Id: Ie98b77b883b084886797680ef317b9668f1d0445
2024-01-02gnu: emacs-beframe: Update to 1.0.0.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-beframe): Update to 1.0.0. Change-Id: I1df7f004c24cc783869421f656a59610006fcf90
2024-01-02gnu: emacs-apheleia: Update to 4.0.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-apheleia): Update to 4.0. Change-Id: I2d61a20e434400f8dbae7d33894ab6f6134c9630
2024-01-02gnu: emacs-vertico-posframe: Update to 0.7.5.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-vertico-posframe): Update to 0.7.5. Change-Id: Ifff04b43f978e0664cafca2ab8b8e5a8b826bca4
2024-01-02gnu: emacs-ebdb: Update to 0.8.20.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-ebdb): Update to 0.8.20. Change-Id: Ib3420c220beadc022bf3e65c8d904a0237f9dd18
2024-01-02gnu: emacs-tramp: Update to 2.6.2.0.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-tramp): Update to 2.6.2.0. Change-Id: Id3db704243d269b1b0979a4ed2fe36bd42f8e9bb
2024-01-02gnu: emacs-kind-icon: Update to 0.2.1.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-kind-icon): Update to 0.2.1. Change-Id: Id0fe5f72a3252cf3bf7348cd45db89da9e80b6ec
2024-01-02gnu: emacs-eldoc: Update to 1.15.0.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-eldoc): Update to 1.15.0. Change-Id: Icea7f7d60301892e9476b930ab19a85f41b29f4f
2024-01-02gnu: emacs-subed: Update to 1.2.11.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-subed): Update to 1.2.11. Change-Id: Ib3838ec91afdeefef267df49394ee4b1f75fa63a
2024-01-02gnu: emacs-auctex: Update to 13.2.3.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-auctex): Update to 13.2.3. Change-Id: Iabeb142f7fe1f5fcf925f788263c76eb0bbf1382
2024-01-02gnu: emacs-rec-mode: Update to 1.9.3.Nicolas Goaziou
* gnu/packages/databases.scm (emacs-rec-mode): Update to 1.9.3. Change-Id: I4268c08171b75442a6ba5b5da2887ae9764df98d
2024-01-01gnu: r-seurat-utils: Update to 2.5.0-1.c0374cc.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-seurat-utils): Update to 2.5.0-1.c0374cc. [propagated-inputs]: Add r-databaselinke-r, r-enhancedvolcano, r-foreach, r-job, r-magrittr, r-pheatmap, r-plotly, r-qs, r-rstudioapi, and r-tidyverse. Change-Id: Iea2df8205357e7717c0adec00f6852794817d295
2024-01-01gnu: Add r-databaselinke-r.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-databaselinke-r): New variable. Change-Id: I0cfcb5b6810b7afebbb9ccb02aafcce05507536c
2024-01-01gnu: Add r-job.Ricardo Wurmus
* gnu/packages/cran.scm (r-job): New variable. Change-Id: I37a0870bd22d5bc2e700f843fca49f242a197440
2024-01-01gnu: Remove r-rmetasim.Ricardo Wurmus
This package fails to build and has been archived on CRAN in 2021. * gnu/packages/cran.scm (r-rmetasim): Remove variable. Change-Id: I46a6c98d7e05faac6f83e29dfb21196a69bae56b
2024-01-01gnu: r-batchelor: Update to 1.18.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-batchelor): Update to 1.18.1. Change-Id: Ic541acacc7e02951f0b2cc6d08d257fe22d7d4b4
2024-01-01gnu: r-genomeinfodb: Update to 1.38.5.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.38.5. Change-Id: I000bf46cc66ed4a6f1e44b12989326c121acde4c
2024-01-01gnu: r-seuratdisk: Update to 0.0.0.9021-1.877d4e1.Ricardo Wurmus
* gnu/packages/cran.scm (r-seuratdisk): Update to 0.0.0.9021-1.877d4e1. Change-Id: Iab1426efe5b792aacf19ab15e9d6d95be0bac38b
2024-01-01gnu: r-sparsearray: Update to 1.2.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-sparsearray): Update to 1.2.3. Change-Id: I5907db78a1261a3dbe0390737cc357bafbdb331e
2024-01-01gnu: r-genomicscores: Update to 2.14.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 2.14.3. Change-Id: I973721a2ba3a5c5d7e23c4063f363fea7bdfe77e
2024-01-01gnu: r-metapod: Update to 1.10.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-metapod): Update to 1.10.1. Change-Id: Iafd5b48420d12f9fd02966c83914feb1ef38e510
2024-01-01gnu: r-biocneighbors: Update to 1.20.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.20.1. Change-Id: I34aa795404d8c083585f83d5a02810a9005bef32
2024-01-01gnu: r-genomeinfodb: Update to 1.38.4.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.38.4. Change-Id: Icdd7237e7a4d15a6b9554fca77423148d6f7438e
2024-01-01gnu: Add r-inext.Ricardo Wurmus
* gnu/packages/cran.scm (r-inext): New variable. Change-Id: I6a87cfb57bfc8000520b98999cf260d2873f0b61
2024-01-01import/cran: Restore format-inputs.Ricardo Wurmus
This fixes a regression introduced in commit e6223017d95bc615b2648f0798d9a3904d5b5f57 causing the selected input style to be ignored. * guix/import/cran.scm (format-inputs): New procedure. (maybe-inputs): Use it. Change-Id: I0d36f972fcb9888ed2be4ec9360bbcab13c25c5d
2024-01-01gnu: r-fpc: Update to 2.2-11.Ricardo Wurmus
* gnu/packages/statistics.scm (r-fpc): Update to 2.2-11. Change-Id: Iebf343be3f9ce37fc9d740286b185e9c5c733efb
2024-01-01gnu: r-cowplot: Update to 1.1.2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-cowplot): Update to 1.1.2. Change-Id: Ie1688b1eb38e2c3ef04460cc4dd7c35179b6c48e
2024-01-01gnu: r-vipor: Update to 0.4.7.Ricardo Wurmus
* gnu/packages/statistics.scm (r-vipor): Update to 0.4.7. Change-Id: I7a7442ae64d5a96a4ab20427ab5fb8bcdc2e51e2
2024-01-01gnu: r-matrixstats: Update to 1.2.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-matrixstats): Update to 1.2.0. Change-Id: I08ad75b3cdfefdeb9718086be75bb24153e117c9
2024-01-01gnu: r-segmented: Update to 2.0-1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-segmented): Update to 2.0-1. Change-Id: Ieb6dac2712af46fffd29959d9510153dd1f1fb5d
2024-01-01gnu: r-brew: Update to 1.0-10.Ricardo Wurmus
* gnu/packages/statistics.scm (r-brew): Update to 1.0-10. Change-Id: I8d3045477d8b329f0c626738a0cd8cf02862e34c
2024-01-01gnu: r-yaml: Update to 2.3.8.Ricardo Wurmus
* gnu/packages/statistics.scm (r-yaml): Update to 2.3.8. Change-Id: I0b654db60d894e160c1ad8aa77000fc90ea649c3
2024-01-01gnu: r-dbi: Update to 1.2.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-dbi): Update to 1.2.0. Change-Id: I4384d37dd602b396fce736ff5c3b33e3da965233
2024-01-01gnu: r-stringi: Update to 1.8.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-stringi): Update to 1.8.3. Change-Id: Id600b65a926a233400870444ad3028690be3e92e
2024-01-01gnu: r-mgcv: Update to 1.9-1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-mgcv): Update to 1.9-1. Change-Id: I9275750902b6e2d2bd1c7394363bdbc66043c4de
2024-01-01gnu: r-ggh4x: Update to 0.2.7.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggh4x): Update to 0.2.7. Change-Id: I0211d69404806922d6725f4936593573674d7e59
2024-01-01gnu: r-ragg: Update to 1.2.7.Ricardo Wurmus
* gnu/packages/cran.scm (r-ragg): Update to 1.2.7. Change-Id: I95f8c91f678181066745cad09295c4bcf24993de
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