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2020-06-24image: Move hurd image definition to a dedicated file.Mathieu Othacehe
This moves hurd-disk-image to a dedicated file. It also defines a default operating-system so that the image can be built standalone. * gnu/system/images/hurd.scm: New file, * gnu/local.mk (GNU_SYSTEM_MODULES): add it, * gnu/system/image.scm (root-offset, root-label): Export it, (hurd-disk-image): remove it as this is now defined in the new, Hurd dedicated file above, (find-image): adapt to avoid loop dependency.
2020-06-24gnu: symengine: Fix indentation.Nicolas Goaziou
* gnu/packages/algebra.scm (symengine): Fix indentation and apply small cosmetic fixes.
2020-06-24gnu: Add python-symengine.Vinicius Monego
* gnu/packages/python-xyz.scm (python-symengine): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-06-24gnu: Add symengine.Vinicius Monego
* gnu/packages/algebra.scm (symengine): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-06-24gnu: sssd: Fix build.Oleg Pykhalov
* gnu/packages/patches/sssd-fix-samba.patch: New file. * gnu/local.mk (dist_patch_DATA): Add this. * gnu/packages/sssd.scm (sssd)[source]: Add this.
2020-06-24gnu: r-fpc: Update to 2.2-6.Ricardo Wurmus
* gnu/packages/statistics.scm (r-fpc): Update to 2.2-6.
2020-06-24gnu: r-dt: Update to 0.14.Ricardo Wurmus
* gnu/packages/statistics.scm (r-dt): Update to 0.14.
2020-06-24gnu: r-segmented: Update to 1.2-0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-segmented): Update to 1.2-0.
2020-06-24gnu: r-knitr: Update to 1.29.Ricardo Wurmus
* gnu/packages/statistics.scm (r-knitr): Update to 1.29.
2020-06-24gnu: r-patchwork: Update to 1.0.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-patchwork): Update to 1.0.1.
2020-06-24gnu: r-ggforce: Update to 0.3.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggforce): Update to 0.3.2.
2020-06-24gnu: r-bookdown: Update to 0.20.Ricardo Wurmus
* gnu/packages/cran.scm (r-bookdown): Update to 0.20.
2020-06-24gnu: r-docopt: Update to 0.7.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-docopt): Update to 0.7.1.
2020-06-24gnu: r-magick: Update to 2.4.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-magick): Update to 2.4.0. [native-inputs]: Add r-knitr.
2020-06-24gnu: r-recipes: Update to 0.1.13.Ricardo Wurmus
* gnu/packages/cran.scm (r-recipes): Update to 0.1.13. [propagated-inputs]: Add r-lifecycle.
2020-06-24gnu: r-gower: Update to 0.2.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-gower): Update to 0.2.2.
2020-06-24gnu: libsignal-protocol-c: Don't use unstable tarball.Efraim Flashner
* gnu/packages/messaging.scm (libsignal-protocol-c)[source]: Download using git-fetch.
2020-06-24gnu: ocaml4.07-piqi: Don't use unstable tarball.Efraim Flashner
* gnu/packages/ocaml.scm (ocaml4.07-piqi)[source]: Download using git-fetch. [arguments]: Add custom phase to make files writable.
2020-06-24gnu: jmtpfs: Don't use unstable tarball.Efraim Flashner
* gnu/packages/linux.scm (jmtpfs)[source]: Download using git-fetch.
2020-06-24gnu: pflask: Don't use unstable tarball.Efraim Flashner
* gnu/packages/linux.scm (pflask)[source]: Download using git-fetch.
2020-06-24gnu: procenv: Don't use unstable tarball.Efraim Flashner
* gnu/packages/linux.scm (procenv)[source]: Download using git-fetch.
2020-06-24gnu: ddate: Don't use unstable tarball.Efraim Flashner
* gnu/packages/linux.scm (ddate)[source]: Download using git-fetch.
2020-06-24gnu: java-usb4java: Don't use unstable tarball.Efraim Flashner
* gnu/packages/libusb.scm (java-usb4java)[source]: Download using git-fetch.
2020-06-24gnu: antlr3-3.3: Don't propagate antlr3-3.1.Efraim Flashner
* gnu/packages/java.scm (antlr3-3.3)[propagated-inputs]: Remove antlr3-3.1.
2020-06-24gnu: python2-zipp-bootstrap: Add missing name field.Efraim Flashner
* gnu/packages/python-compression.scm (python2-zipp-bootstrap)[name]: Don't inherit from python2-zipp.
2020-06-24gnu: python-on-guile: Do not propagate dependencies.Marius Bakke
* gnu/packages/guile-xyz.scm (python-on-guile)[propagated-inputs]: Move everything to ... [inputs] ... here.
2020-06-24gnu: python-on-guile: Wrap with own Guile modules.Marius Bakke
* gnu/packages/guile-xyz.scm (python-on-guile)[arguments]: Add the output modules to the wrapper.
2020-06-24gnu: python-on-guile: Update to 1.2.3.4.Marius Bakke
* gnu/packages/guile-xyz.scm (python-on-guile): Update to 1.2.3. [source]: Download from <https://gitlab.com/python-on-guile/python-on-guile>. [inputs]: Change from GUILE-2.2 to GUILE-3.0. [arguments]: Add phase augment-GUILE_LOAD_PATH.
2020-06-24gnu: guile-persist: Update to 1.2.3.Marius Bakke
* gnu/packages/guile-xyz.scm (guile-persist): Update to 1.2.3. [source](modules, snippet): Remove. [inputs]: Change from GUILE-2.2 to GUILE-3.0.
2020-06-24gnu: guile-stis-parser: Update to 1.2.4.1.Marius Bakke
* gnu/packages/guile-xyz.scm (guile-stis-parser): Update to 1.2.4.1. [arguments]: Remove obsolete phase. [inputs]: Change from GUILE-2.2 to GUILE-3.0.
2020-06-23gnu: Add v.Ryan Prior
* gnu/packages/vlang.scm: New file. * gnu/packages/vlang.scm (v): New variable. * gnu/local.mk: Add vlang.scm. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-23gnu: flatpak: Fix xdg-dbus-proxy configure flag.Robin Templeton
* gnu/packages/package-management.scm (flatpak) [arguments]: Pass the full "xdg-dbus-proxy" program path to the "--with-system-dbus-proxy" configure flag. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-23openpgp: Use Libgcrypt's crc24 implementation.Ludovic Courtès
This gives an 18% speedup on the wall-clock time of: guile -c '(use-modules (git) (guix git-authenticate)) (load-keyring-from-reference (repository-open ".") "keyring")' * guix/openpgp.scm (crc24): Rewrite by calling out to 'bytevector-hash'.
2020-06-23doc: cookbook: Fix typos.Ludovic Courtès
* doc/guix-cookbook.texi (Extended example): Fix typos.
2020-06-23gnu: python-pywavelets: Update to 1.1.1.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-pywavelets): Update to 1.1.1. [arguments]: Update "check" phase. [native-inputs]: Replace python-nose with python-pytest.
2020-06-23gnu: Add python-imageio.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-imageio): New variable.
2020-06-23gnu: Add python-lfdfiles.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-lfdfiles): New variable.
2020-06-23gnu: Add python-tifffile.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-tifffile): New variable.
2020-06-23gnu: Add python-roifile.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-roifile): New variable.
2020-06-23gnu: Add python-msgpack-numpy.Ricardo Wurmus
* gnu/packages/python-science.scm (python-msgpack-numpy): New variable.
2020-06-23gnu: python-scikit-image: Update to 0.17.2.Ricardo Wurmus
* gnu/packages/python-science.scm (python-scikit-image): Update to 0.17.2.
2020-06-23gnu: python-gridmap: Update to 0.14.0.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-gridmap): Update to 0.14.0.
2020-06-23gnu: Add python-progressbar2.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-progressbar2): New variable.
2020-06-23gnu: python-pycodestyle: Update to 2.6.0.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-pycodestyle): Update to 2.6.0. [arguments]: Replace check phase. [native-inputs]: Add python-pytest.
2020-06-23gnu: python-pyflakes: Update to 2.2.0.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-pyflakes): Update to 2.2.0.
2020-06-23gnu: python-flake8: Update to 3.8.3.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-flake8): Update to 3.8.3.
2020-06-23gnu: python-utils: Update to 2.4.0.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-utils): Update to 2.4.0. [arguments]: Replace check phase.
2020-06-23gnu: python-pytest-flakes: Update to 4.0.0.Ricardo Wurmus
* gnu/packages/check.scm (python-pytest-flakes): Update to 4.0.0. [arguments]: Skip broken test.
2020-06-23gnu: mpv: Use deterministic ordering of shared library dependencies.Marius Bakke
Fixes <https://bugs.gnu.org/42025>. Reported by Msavoritias <marinus.savoritias@disroot.org>. * gnu/packages/video.scm (mpv)[arguments]: Add phase 'build-reproducibly'.
2020-06-23gnu: ungoogled-chromium: Update to 83.0.4103.116-0.f08ce8b [fixes ↵Marius Bakke
CVE-2020-6509]. * gnu/packages/chromium.scm (%chromium-version): Set to 83.0.4103.116. (%ungoogled-origin): Update hash.