Age | Commit message (Collapse) | Author |
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* gnu/packages/image-processing.scm (opencv)[native-inputs]: Add boost and vgg
descriptors.
[arguments]: Place descriptor files in expected locations; do not disable
xfeatures2d feature.
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* gnu/packages/bioinformatics.scm (python-pygenometracks)[arguments]:
Add phase remove-invalid-syntax.
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The old surrounding-sexp procedure would read all S-expressions from the
beginning of the file up to the given line number and then return the last
encountered S-expression. This is quite wasteful. Instead we can record all
lines that begin with an S-expression and jump straight to the offset closest
to the desired line number to read the S-expression there.
* etc/committer.scm.in (lines+offsets-with-opening-parens): New procedure.
(surrounding-sexp): Use it.
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* etc/committer.scm.in (%original-file-cache): New variable.
(read-original-file): New procedure.
(read-original-file*): New procedure.
(old-sexp): Use it.
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This gives us a slight performance boost.
* etc/committer.scm.in (main): Disable recording of positions.
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* etc/committer.scm.in (main): Reuse previously computed changes if there are
no changes to the number of definitions.
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* gnu/packages/bioinformatics.scm (htslib)[source]: Add snippet to
remove bundled htscodecs.
[arguments]: Add configure-flag to link against htscodecs.
[propagated-inputs]: Add htscodecs.
(htslib-1.14, htslib-1.12): Use bundled htscodecs.
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* gnu/packages/bioinformatics.scm (htscodecs): Update to 1.5.1.
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* gnu/packages/education.scm (tipp10): Update to 3.3.0.
[source]: Use git-fetch. Drop obsolete patches.
[build-system]: Use qt-build-system.
[arguments]: Add #:qtbase. Remove #:phases.
[inputs]: Replace qtbase-5 with qtbase, qtmultimedia-5 with qtmultimedia.
[home-page]: Update home page.
[license]: Add comment.
* gnu/packages/patches/tipp10-disable-downloader.patch: Delete file.
* gnu/packages/patches/tipp10-fix-compiling.patch: Likewise.
* gnu/packages/patches/tipp10-qt5.patch: Likewise.
* gnu/packages/patches/tipp10-remove-license-code.patch: Likewise.
* gnu/local.mk (dist_patch_DATA): De-register them.
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* gnu/packages/python-xyz.scm (python-glcontext): Update to 2.4.0-1.0af21b7.
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* gnu/packages/python-xyz.scm (python-glcontext): Explicitly refer to commit
instead of mutable Git tag.
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* gnu/packages/ocaml.scm (bap): Update to 2.6.0-alpha-0.f995d28.
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* gnu/packages/ocaml.scm (bap): Explicitly refer to commit instead of mutable
Git tag.
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Follow-up of 756e336fa008c2469b4a7317ad5c641ed48f25d6 fixing the issue.
* guix/git/scm (reference-available?): Address case by case to determine
whether the reference exists in the local Git checkout.
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* gnu/packages/bioinformatics.scm (wfa2-lib)[properties]: New field.
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Lack of clarity reported by lrustland on IRC.
* doc/contributing.texi (Running Guix Before It Is Installed): Refer to
the Building from Git section when giving instructions for generating
the pre-inst-env script.
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* gnu/packages/w3m.scm (w3m)[native-inputs]:
Remove input labels.
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This increases the closure by a whopping 0.1 MiB.
* gnu/packages/w3m.scm (w3m)[arguments]: Add "-enable-image=fb,x11"
to the #:configure-flags.
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* gnu/packages/java.scm (jbr21): New variable.
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* gnu/packages/java.scm (openjdk21): New variable.
* gnu/packages/patches/openjdk-21-fix-rpath.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
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* gnu/packages/java.scm (openjdk20): New variable.
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* etc/teams.scm.in (Marius Bakke): New person.
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* gnu/packages/bioinformatics.scm (python-bwapy)[synopsis]: Fix typo.
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* gnu/packages/bioinformatics.scm (python-arboreto)[propagated-inputs]: Add
PYTHON-LZ4 and PYTHON-PYARROW.
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* gnu/packages/finance.scm (python-duniterpy): Update to 1.1.1.
[build-system]: Switch to PYPROJECT-BUILD-SYSTEM.
[arguments]: Add more tweaks for hard coded version ranges.
[native-inputs]: Add PYTHON-POETRY-CORE.
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* gnu/packages/python-crypto.scm (python-libnacl): Update to 2.1.0.
[build-system]: Switch to PYPROJECT-BUILD-SYSTEM.
[arguments]: Adjust hack for locating libsodium. Add custom check phase.
[native-inputs]: Remove PYTHON-PYHAMCREST. Add PYTHON-POETRY-CORE.
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* gnu/packages/sphinx.scm (python-sphinxcontrib-autoprogram): Update to 0.1.8.
[native-inputs]: Move PYTHON-SPHINX ...
[propagated-inputs]: ... here.
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* gnu/packages/instrumentation.scm (barectf): Update to 3.1.2.
[source]: Switch to GIT-FETCH.
[build-system]: Change to PYPROJECT-BUILD-SYSTEM.
[arguments]: Remove version pins. Set CC before building.
[native-inputs]: Add PYTHON-POETRY-CORE and PYTHON-PYTEST. Remove
GCC-TOOLCHAIN, GNU-MAKE, PYTHON-PYYAML-5, and PYTHON-TOX. Move PYTHON-JINJA2,
PYTHON-JSONSCHEMA, and PYTHON-TERMCOLOR ...
[propagated-inputs]: ... here. Add PYTHON-PYYAML.
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* gnu/packages/python-xyz.scm (python-incremental): Update to 22.10.0.
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* gnu/packages/python-xyz.scm (python-txaio): Update to 23.1.1.
[build-system]: Change to PYPROJECT-BUILD-SYSTEM.
[propagated-inputs]: Remove.
[native-inputs]: Add PYTHON-PYTEST and PYTHON-TWISTED.
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* gnu/packages/python-web.scm (python-hyperlink): Update to 21.0.0.
[build-system]: Change to PYPROJECT-BUILD-SYSTEM.
[arguments]: New field.
[native-inputs]: Add PYTHON-PYTEST.
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* gnu/packages/databases.scm (python-psycopg): Update to 3.1.10.
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* gnu/packages/databases.scm (python-psycopg-pool): Update to 3.1.7.
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* gnu/packages/python-web.scm (python-uvicorn): Update to 0.23.2.
[build-system]: Switch to PYPROJECT-BUILD-SYSTEM.
[arguments]: Adjust accordingly.
[native-inputs]: Add PYTHON-A2WSGI and PYTHON-HATCHLING.
[propagated-inputs]: Remove PYTHON-ASGIREF.
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* gnu/packages/python-web.scm (python-websockets): Update to 11.0.3.
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* gnu/packages/markup.scm (python-cmarkgfm): Update to 2022.10.27.
[arguments]: Remove obsolete phase.
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* gnu/packages/python-xyz.scm (python-cachetools): Update to 5.3.1.
* gnu/packages/matrix.scm (python-matrix-nio)[arguments]: Add phase to loosen
cachetools requirement.
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* gnu/packages/python-xyz.scm (python-distlib)[inputs]: Add BASH-MINIMAL.
[arguments]: Use SEARCH-INPUT-FILE instead of WHICH.
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* gnu/packages/python-xyz.scm (python-distlib): Update to 0.3.7.
[build-system]: Switch to PYPROJECT-BUILD-SYSTEM.
[arguments]: Remove redundant phases.
[native-inputs]: Remove PYTHON-PYPA-BUILD.
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* gnu/packages/python-xyz.scm (python-platformdirs): Update to 3.10.0.
[build-system]: Switch to PYPROJECT-BUILD-SYSTEM.
[native-inputs]: Add PYTHON-HATCHLING and PYTHON-HATCH-VCS. Remove
PYTHON-SETUPTOOLS-SCM.
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* gnu/packages/python-xyz.scm (python-bleach): Update to 6.0.0.
[propagated-inputs]: Remove PYTHON-WEBENCODINGS.
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* gnu/packages/django.scm (python-django-4.0): Rename to ...
(python-django-4.2): ... this. Update to 4.2.5.
(python-django-3.2): Adjust inherits accordingly.
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* gnu/packages/python-web.scm (python-asgiref): Update to 3.7.2.
[native-inputs]: Add PYTHON-MYPY.
[propagated-inputs]: Add PYTHON-TYPING-EXTENSIONS.
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* gnu/packages/django.scm (python-django-3.2): Update to 3.2.21.
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* gnu/packages/django.scm (python-pytest-django): Update to 4.5.2.
[native-inputs]: Remove PYTHON-DJANGO and PYTHON-PYTEST-XDIST.
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* gnu/packages/python-xyz.scm (python-pkginfo): Update to 1.9.6.
[build-system]: Switch to PYPROJECT-BUILD-SYSTEM.
[native-inputs]: Remove PYTHON-WHEEL. Add PYTHON-PYTEST.
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* gnu/packages/python-xyz.scm (python-daemon): Update to 3.0.1.
[arguments]: Skip two more tests.
[propagated-inputs]: Add PYTHON-PACKAGING and PYTHON-SETUPTOOLS.
[native-inputs]: Remove PYTHON-COVERAGE, PYTHON-TWINE, and PYTHON-MOCK.
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