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2022-01-06gnu: r-cytolib: Update to 2.6.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.6.1.
2022-01-06gnu: r-clusterprofiler: Update to 4.2.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.2.1.
2022-01-06gnu: r-icobra: Update to 1.22.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.22.2.
2022-01-06gnu: r-destiny: Update to 3.8.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-destiny): Update to 3.8.0.
2022-01-06gnu: r-diffbind: Update to 3.4.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.4.3.
2022-01-06gnu: r-systempiper: Update to 2.0.5.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-systempiper): Update to 2.0.5.
2022-01-06gnu: r-structuralvariantannotation: Update to 1.10.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-structuralvariantannotation): Update to 1.10.1.
2022-01-06gnu: r-genomicfeatures: Update to 1.46.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.46.3.
2022-01-06gnu: r-chipseeker: Update to 1.30.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.30.3.
2022-01-06gnu: r-biocparallel: Update to 1.28.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.28.3.
2022-01-06gnu: r-yapsa: Update to 1.20.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-yapsa): Update to 1.20.1. [propagated-inputs]: Remove r-pmcmr; add r-pmcmrplus.
2022-01-06services: Document the full list of available NTP URLs.Leo Famulari
* gnu/services/networking.scm (%ntp-servers): List the URLs granted to us.
2022-01-06gnu: godot: Remove input labels.Tobias Geerinckx-Rice
* gnu/packages/game-development.scm (godot)[inputs]: Remove input labels. [arguments]: Tweak accordingly.
2022-01-06gnu: godot: Update to 3.4.2.Tobias Geerinckx-Rice
* gnu/packages/game-development.scm (godot): Update to 3.4.2. [arguments]: Don't explicitly return #t from phases.
2022-01-05gnu: linux-libre 4.4: Update to 4.4.298.Leo Famulari
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.298. (linux-libre-4.4-pristine-source): Update hash.
2022-01-05gnu: linux-libre 4.9: Update to 4.9.296.Leo Famulari
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.296. (linux-libre-4.9-pristine-source): Update hash.
2022-01-05gnu: linux-libre 4.14: Update to 4.14.261.Leo Famulari
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.261. (linux-libre-4.14-pristine-source): Update hash.
2022-01-05gnu: linux-libre 4.19: Update to 4.19.224.Leo Famulari
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.224. (linux-libre-4.19-pristine-source): Update hash.
2022-01-05gnu: linux-libre 5.4: Update to 5.4.170.Leo Famulari
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.170. (linux-libre-5.4-pristine-source): Update hash.
2022-01-05gnu: linux-libre 5.10: Update to 5.10.90.Leo Famulari
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.90. (linux-libre-5.10-pristine-source): Update hash.
2022-01-05gnu: linux-libre: Update to 5.15.13.Leo Famulari
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.13. (linux-libre-5.15-pristine-source): Update hash.
2022-01-06gnu: snapraid: Update to 12.0.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (snapraid): Update to 12.0.
2022-01-06gnu: snapraid: ‘Fix’ build.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (snapraid)[arguments]: Remove "--enable-valgrind" from #:configure-flags. [native-inputs]: Remove valgrind.
2022-01-06gnu: snapraid: Use G-expressions.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (snapraid)[arguments]: Rewrite as G-expressions.
2022-01-06gnu: wimlib: Update to 1.13.5.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (wimlib): Update to 1.13.5.
2022-01-06gnu: borgmatic: Use G-expressions.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (borgmatic)[arguments]: Rewrite as G-expressions.
2022-01-06gnu: borgmatic: Update to 1.5.22.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (borgmatic): Update to 1.5.22.
2022-01-06gnu: pan: Use G-expressions.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (pan)[arguments]: Rewrite as G-expressions.
2022-01-06gnu: pan: Update to 0.149.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (pan): Update to 0.149. [arguments]: Don't explicitly return #t from phases. [inputs]: Upgrade gmime-2.6 to gmime.
2022-01-06gnu: xxhash: Use G-expressions.Tobias Geerinckx-Rice
* gnu/packages/digest.scm (xxhash)[arguments]: Rewrite as G-expressions.
2022-01-06gnu: xxhash: Update to 0.8.1.Tobias Geerinckx-Rice
* gnu/packages/digest.scm (xxhash): Update to 0.8.1. [arguments]: Add a new 'fix-man-page-links phase.
2022-01-06gnu: toybox: Use G-expressions.Tobias Geerinckx-Rice
* gnu/packages/busybox.scm (toybox)[arguments]: Rewrite as G-expressions.
2022-01-06gnu: toybox: Update to 0.8.6.Tobias Geerinckx-Rice
* gnu/packages/busybox.scm (toybox): Update to 0.8.6.
2022-01-06gnu: vice: Update to 3.6.Tobias Geerinckx-Rice
* gnu/packages/emulators.scm (vice): Update to 3.6. [arguments]: Add "--disable-html-docs" to #:configure-flags.
2022-01-06gnu: xchm: Update to 1.33.Tobias Geerinckx-Rice
* gnu/packages/ebook.scm (xchm): Update to 1.33.
2022-01-06gnu: knot-resolver: Update to 5.4.4.Tobias Geerinckx-Rice
* gnu/packages/dns.scm (knot-resolver): Update to 5.4.4.
2022-01-05gnu: cqfd: Update to 5.3.0.Maxim Cournoyer
* gnu/packages/docker.scm (cqfd): Update to 5.3.0.
2022-01-05gnu: python-urwidtrees: Build with python-mock.Tanguy Le Carrour
This fixes a build failure in the 'sanity-check' phase. * gnu/packages/python-xyz.scm (python-urwidtrees)[native-inputs]: Add python-mock. Signed-off-by: Leo Famulari <leo@famulari.name>
2022-01-05gnu: go-github-com-hashicorp-hcl: Update to 1.0.0.Sharlatan Hellseher
* gnu/packages/golang: Use the latest tag for HCL V1 instead of commit [native-inputs]: add go-github-com-davecgh-go-spew Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-05gnu: minetest-unified-inventory: Update to 2021-12-26.Maxime Devos
* gnu/packages/minetest.scm (minetest-unified-inventory): Update to 2021-12-26. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-05gnu: minetest-technic: Update to 2021-09-11.Maxime Devos
* gnu/packages/minetest.scm (minetest-technic): Update to 2021-09-11. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-05gnu: minetest-mobs-animal: Update to 2021-11-14.Maxime Devos
* gnu/packages/minetest.scm (minetest-mobs-animal): Update to 2021-11-14. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-05gnu: minetest-mobs: Update to 2021-12-12.Maxime Devos
* gnu/packages/minetest.scm (minetest-mobs): Update to 2021-12-12. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-05gnu: minetest-homedecor-modpack: Update to 2021-12-26.Maxime Devos
* gnu/packages/minetest.scm (minetest-homedecor-modpack): Update to 2021-12-26. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-05gnu: minetest-basic-materials: Update to 2021-12-26.Maxime Devos
* gnu/packages/minetest.scm (minetest-basic-materials): Update to 2021-12-26. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-05gnu: guile-udev: Update to 0.2.3Artyom V. Poptsov
* gnu/packages/guile-xyz.scm (guile-udev): Update to 0.2.3. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-05import: elpa: Also check NonGNU ELPA for updates.Xinglu Chen
* guix/import/elpa.scm (latest-release): Determine the repository based on the URL of the source. (package-from-gnu.org?): Rename to ... (elpa-repository): ...this; memoize. (package-from-elpa-repository?): New procedure. (%elpa-updater): Adjust accordingly. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-05home: import: Fix handling of manifest entries with specific output.Arjan Adriaanse
specification->package fails on manifest entries with specific outputs, resulting in an invalid home configuration. This changes the import command to use specification->package+output instead. * guix/scripts/home/import.scm (manifest+configuration-files->code): Make sure manifest entries with specific output are also handled. * tests/home-import.scm: Specify output in home environment manifest entry. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-05gnu: tootle: Remove trailing #t in phases.Ludovic Courtès
* gnu/packages/mastodon.scm (tootle)[arguments]: Remove trailing #t.
2022-01-05gnu: tootle: Simplify inputs.Ludovic Courtès
* gnu/packages/mastodon.scm (tootle)[native-inputs]: Simplify.
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