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2023-04-21tests: Fork and exec a new Guile for the marionette REPL.Ludovic Courtès
By merely forking PID 1, details from PID 1 (shepherd) would leak into the marionette process, such as the set of modules in scope and state inherited from the shepherd process (<service> instances, fibers, etc.). Running a fresh Guile instance avoids that. * gnu/tests.scm (marionette-program): New procedure. (marionette-shepherd-service): Change 'start' to use 'make-forkexec-constructor', and run the result of 'marionette-program'.
2023-04-21tests: Use the client 'start-service' procedure.Ludovic Courtès
The previous code worked "by chance": 'start' from (shepherd service) happened to be in scope because the marionette REPL is created by a mere 'primitive-fork', and 'start' happened to kinda work. * gnu/tests/base.scm (run-basic-test): Use 'start-service' from (gnu services herd), not 'start' from (shepherd service), which is not supposed to work. * gnu/tests/install.scm (run-install): Likewise.
2023-04-21services: herd: 'load-services/safe' is synonymous with 'load-services'.Ludovic Courtès
This is a followup to 547965aa27b6a09cadf42130b7ec7db3f1aee61f. * gnu/services/herd.scm (load-services/safe): Make an alias for 'load-services'.
2023-04-21services: nscd: Depend on syslogd.Ludovic Courtès
This gets rid of nscd debug messages on the console at boot time. * gnu/services/base.scm (nscd-shepherd-service): Add dependency on 'syslogd'.
2023-04-21services: postgresql: Add default package.Ludovic Courtès
* gnu/services/databases.scm (<postgresql-configuration>)[postgresql]: Add default value, moved from... (postgresql-service-type)[default-value]: ... here.
2023-04-21services: knot: Add 'configuration' action.Ludovic Courtès
* gnu/services/dns.scm (knot-shepherd-service): Add 'actions' field.
2023-04-21services: rsync: Add 'configuration' action.Ludovic Courtès
* gnu/services/rsync.scm (rsync-shepherd-service): Add 'actions' field.
2023-04-21services: redis: Add 'configuration' action.Ludovic Courtès
* gnu/services/databases.scm (redis-shepherd-service): Add 'actions' field.
2023-04-21services: mysql: Add 'configuration' action.Ludovic Courtès
* gnu/services/databases.scm (mysql-shepherd-service): Add 'actions' field.
2023-04-21services: postgresql: Add 'configuration' action.Ludovic Courtès
* gnu/services/databases.scm (postgresql-shepherd-service): Add 'actions' field.
2023-04-21services: postgresql: Add the 'postgresql' Shepherd service name.Ludovic Courtès
* gnu/services/databases.scm (postgresql-shepherd-service): Add 'postgresql' to 'provision'.
2023-04-21gnu: freerdp: Update to 2.2.0 [security fixes].Maxim Cournoyer
This fixes CVE-2022-39316, CVE-2022-39317, CVE-2022-39318, CVE-2022-39319, CVE-2022-39320, CVE-2022-41877, CVE-2022-39347, CVE-2022-39282, CVE-2022-39283, CVE-2021-41159 and CVE-2021-41160. * gnu/packages/rdesktop.scm (freerdp): Update to 2.2.0. [arguments]: Use gexps. Do not set DOCBOOKXSL_DIR in #:configureflags.
2023-04-21gnu: freerdp: Update to 2.2.0 [security fixes].Maxim Cournoyer
This fixes CVE-2022-39316, CVE-2022-39317, CVE-2022-39318, CVE-2022-39319, CVE-2022-39320, CVE-2022-41877, CVE-2022-39347, CVE-2022-39282, CVE-2022-39283, CVE-2021-41159 and CVE-2021-41160. * gnu/packages/rdesktop.scm (freerdp): Update to 2.2.0. [arguments]: Use gexps. Do not set DOCBOOKXSL_DIR in #:configureflags.
2023-04-21services: syslog: Log auth.info to /var/log/secure in default configuration.Maxim Cournoyer
This causes authentication failures such as those generated by SSH brute force attacks to appear in /var/log/secure, which is picked up by tools such as fail2ban. * gnu/services/base.scm (%default-syslog.conf): Add a auth.info selector for the /var/log/secure log. Series-to: 62802@debbugs.gnu.org
2023-04-21services/syslog: Strip leading white space indent in syslog.conf.Maxim Cournoyer
This is a cosmetic change. * gnu/services/base.scm (%default-syslog.conf): Add a comment referencing the documentation. Strip the extraneous leading trailing white space indent.
2023-04-21services: syslog: Add a reload action.Maxim Cournoyer
* gnu/services/base.scm (syslog-service-type) [actions]: Add a reload action. * doc/guix.texi (Base Services): Document it.
2023-04-21services: syslog: Move configuration to /etc/syslog.conf.Maxim Cournoyer
Having the configuration live at a static location makes it possible to hot-reload it. * gnu/services/base.scm (syslog.conf): New variable. (syslog-etc, syslog-shepherd-service): New procedures. (syslog-service-type): Rewrite using the above new variable and procedures, extending etc-service-type with its configuration file.
2023-04-21gnu: libxml++: Remove fix-documentation phase.Maxim Cournoyer
* gnu/packages/gnome.scm (libxml++) [arguments]: Delete field.
2023-04-21gnu: opensp: Fix build.Maxim Cournoyer
This is a follow up commit to b84d0b81b2. * gnu/packages/xml.scm (opensp) [arguments]: Properly quote.
2023-04-21gnu: bppsuite: Update to 2.4.1.Mădălin Ionel Patrașcu
* gnu/packages/bioinformatics.scm (bppsuite): Update to 2.4.1. [source]: Remove the commit and use the release version. Changed to the github repo. [arguments]: Remove the disabled parallel-build. [inputs]: Use list. [home-page]: Changed to github page.
2023-04-21gnu: bpp-popgen: Update to 2.4.1.Mădălin Ionel Patrașcu
* gnu/packages/bioinformatics.scm (bpp-popgen): Update to 2.4.1. [source]: Remove the commit and use the release version. Changed to the github repo. [arguments]: Remove the disabled parallel-build. [home-page]: Changed to new host Université Claude-Bernard Lyon 1.
2023-04-21gnu: Add maffilter.Mădălin Ionel Patrașcu
* gnu/packages/bioinformatics.scm (maffilter): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2023-04-21gnu: tensorflow: Adjust for Python 3.10 compatibility.Ricardo Wurmus
* gnu/packages/machine-learning.scm (tensorflow)[arguments]: Replace build phase 'python3.9-compatibility with 'python3.10-compatibility; patch for move from "collections" to "collections.abc"; add well-meaning but potentially reckless patch to remove overwrite error for __or__ and __ror__ methods; adjust farmhash sources to build with GCC 11; do not use distutils.sysconfig.
2023-04-21gnu: python-protobuf-3.6: Patch for Python 3.10.Ricardo Wurmus
* gnu/packages/protobuf.scm (python-protobuf-3.6)[arguments]: Patch collections import. [native-inputs]: Add python-setuptools-for-tensorflow.
2023-04-21gnu: python-setuptools-for-tensorflow: Patch for Python 3.10 compatibility.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-setuptools-for-tensorflow)[arguments]: Patch collections imports; remove wininst support.
2023-04-21gnu: grpc-1.16.1: Correct input modifications.Ricardo Wurmus
abseil-cpp is not part of the native-inputs but of the inputs. * gnu/packages/rpc.scm (grpc-1.16.1)[native-inputs]: Only replace protobuf. [inputs]: Replace abseil-cpp.
2023-04-21gnu: python-grpcio: Rebuild Cythonized source files.Ricardo Wurmus
* gnu/packages/rpc.scm (python-grpcio)[source]: Delete generated cpp file. [build-system]: Use pyproject-build-system. [arguments]: Patch setup.py to add grpc headers to search path. [inputs]: Replace abseil-cpp with abseil-cpp-20211102.0; add grpc-for-python-grpcio. [native-inputs]: Add python-cython.
2023-04-21gnu: Add grpc-for-python-grpcio.Ricardo Wurmus
* gnu/packages/rpc.scm (grpc-for-python-grpcio): New variable.
2023-04-21gnu: Add abseil-cpp-20211102.0.Ricardo Wurmus
* gnu/packages/cpp.scm (abseil-cpp-20211102.0): New variable.
2023-04-21gnu: Add bpp-phyl-omics.Mădălin Ionel Patrașcu
* gnu/packages/bioinformatics.scm (bpp-phyl-omics): New variable.
2023-04-21gnu: Add bpp-seq-omics.Mădălin Ionel Patrașcu
* gnu/packages/bioinformatics.scm (bpp-seq-omics): New variable.
2023-04-21gnu: bpp-phyl: Update to 2.4.1.Mădălin Ionel Patrașcu
* gnu/packages/bioinformatics.scm (bpp-phyl): Update to 2.4.1. [source]: Remove the commit and use the release version. Changed to the github repo. [arguments]: Remove the disabled parallel-build and out-of-source. [home-page]: Changed to new host Université Claude-Bernard Lyon 1. [synopsis]: Use proper capitalization.
2023-04-21gnu: bpp-seq: Update to 2.4.1.Mădălin Ionel Patrașcu
* gnu/packages/bioinformatics.scm (bpp-seq): Update to 2.4.1. [source]: Remove the commit and use the release version. Changed to the github repo. [arguments]: Remove the disabled parallel-build and out-of-source. [home-page]: Changed to new host Université Claude-Bernard Lyon 1.
2023-04-21gnu: bpp-core: Update to 2.4.1.Mădălin Ionel Patrașcu
* gnu/packages/bioinformatics.scm (bpp-core): Update to 2.4.1. [source]: Remove the commit and use the release version. Changed to the github stored sources. [arguments]: Remove the disabled parallel-build. [home-page]: Changed to new host Université Claude-Bernard Lyon 1.
2023-04-21gnu: luakit: Further improve style.Nicolas Goaziou
This is a followup to d3bc56da0475bc643ccb065483c53c6d28cf8e39. * gnu/packages/web-browsers.scm (luakit)[arguments]<#:phases>: Remove unnecessary INPUTS key. [inputs]: Sort alphabetically.
2023-04-21gnu: luakit: Improve package style.Nicolas Goaziou
* gnu/packages/web-browsers.scm (luakit)[arguments]<#:tests?>: Properly disable tests instead of deleting CHECK phase. <#:make-flags, #:phases>: Use G-expressions. Remove trailing #T. <#:test-targes>: Add it, for the record. [inputs]: Remove labels.
2023-04-21gnu: Add alienblaster.Yovan Naumovski
* gnu/packages/games.scm (alienblaster): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-04-21gnu: Add clog.Antero Mejr
* gnu/packages/parallel.scm (clog): New variable. * gnu/packages/patches/clog-fix-shared-build.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-04-21gnu: a2ps: Update to 4.15.4Andy Tai
* gnu/packages/pretty-print.scm (a2ps): Update to 4.15.4 Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-04-21gnu: kakoune: update to 2022.10.31.Eidvilas Markevičius
* gnu/packages/text-editors.scm (kakoune): Update to 2022.10.31. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-04-21gnu: terminator: Update to 2.1.3Andy Tai
* gnu/packages/gnome.scm (terminator): Update to 2.1.3 Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-04-21gnu: wlr-randr: Update to 0.3.0.kiasoc5
* gnu/packages/wm.scm (wlr-randr): Update to 0.3.0. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-04-21gnu: mpdevil: Update to 1.10.2.kiasoc5
* gnu/packages/mpd.scm (mpdevil): Update to 1.10.2. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-04-21gnu: icewm: Update to 3.3.3.Andy Tai
* gnu/packages/wm.scm (icewm): Update to 3.3.3. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-04-21gnu: python-txtorcon: Fix build.Brendan Tildesley
gnu/packages/python-crypto.scm (python-txtorcon): Fix build failure. [propagated-inputs]: Add PYTHON-PYOPENSSL. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-04-21gnu: wireshark: Update to 4.0.5.Nicolas Goaziou
* gnu/packages/networking.scm (wireshark): Update to 4.0.5.
2023-04-21gnu: komikku: Update to 1.17.0.Liliana Marie Prikler
This fixes a version incompatibility with WebkitGTK. * gnu/packages/gnome.scm (komikku): Update to 1.17.0. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-04-21gnu: luakit: Update to 2.3.3.Raphaël Mélotte
* gnu/packages/web-browsers.scm (luakit): Update to 2.3.3 Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-04-21gnu: emacs-no-littering: Update to 1.3.0.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-no-littering): Update to 1.3.0. [propagated-inputs]: Add EMACS-COMPAT.
2023-04-21gnu: emacs-embark: Update to 0.22.1.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-embark): Update to 0.22.1.
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