Age | Commit message (Collapse) | Author |
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Add a patch to skip more tests that require the network. Along with some other
changes, this gets all but of one of the tests passing.
The remaining test is broken due to a problem with the Python package in Guix,
which is fixed by [1] which is currently on the core-updates branch. This
patch doesn't work on core-updates due to python2-miniboa not being present.
1: d453b0e11d3f001a8160a7d126fdbf40e45d5042
* gnu/packages/python.scm (linkchecker)[source]: Add patch.
[native-inputs]: Add more inputs required for the tests.
[arguments]: Enable the tests, move the 'check phase after 'install. Test
using the installed software, and use py.test.
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* gnu/packages/patches/superlu-dist-awpm-grid.patch: New file.
* gnu/packages/maths.scm (superlu-dist)[source]: Upgrade to 6.0.0. Remove
extraneous 'use-modules' in snippet.
[build-system]: Change to cmake-build-system.
[propagated-inputs]: Replace pt-scotch with pt-scotch32 to match integer
sizes. Add "parmetis" input, from pt-scotch32. Move lapack to ...
[inputs]: ...here. Add openblas and combinatorial-blas.
[arguments]: Replace 'configure' phase with #:configure-flags. Add
'set-c++-standard' and 'omp-setup' phases. Remove
'create-install-directories, 'check', and 'install' phases, which are now
handled by cmake.
* gnu/local.mk (dist_patch_DATA): Add patch.
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* gnu/packages/maths.scm (scotch): Upgrade to 6.0.6.
[source]: Remove patches that have been fixed upstream.
[arguments]: Add 'install-metis' phase.
[outputs]: New field.
(pt-scotch, pt-scotch32)[arguments]: Add 'mpi-setup' phase. Use 'invoke'.
* gnu/packages/patches/scotch-graph-diam-64.patch,
gnu/packages/patches/scotch-graph-induce-type-64.patch,
gnu/packages/patches/scotch-test-threading.patch: Delete files.
* gnu/packages/patches/scotch-integer-declarations.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust as necessary.
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* gnu/packages/maths.scm (combinatorial-blas): New variable.
* gnu/packages/patches/combinatorial-blas-awpm.patch,
gnu/packages/patches/combinatorial-blas-io-fix.patch: New files
* gnu/local.mk(dist_patch_DATA): Add them.
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* gnu/packages/python-check.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
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The qof test is also reinstated; it was failing because the needed locales
were not installed.
* gnu/packages/patches/gnucash-disable-failing-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Unregister it.
* gnu/packages/gnucash.scm (gnucash)[patches]: Remove it.
[phases]{disable-stress-options-test}: Implement it using SUBSTITUTES*.
{install-locales}: New phase.
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* gnu/packages/patches/gnucash-price-quotes-perl.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Unregister it.
* gnu/packages/gnucash.scm (gnucash)[patches]: Remove it.
[phases]{fix-finance-quote-check}: Implement it using SUBSTITUTES*.
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* gnu/local.mk (GNU_SYSTEM_MODULES): Add %D%/ci.scm.
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This is a followup to 33af92dd99c9f2c726c32f81936931c69d719eb9.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add gnu/packages/coq.scm.
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* gnu/packages/patches/openssh-CVE-2018-20685.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ssh.scm (openssh)[source]: Use it.
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* gnu/local.mk (GNU_SYSTEM_MODULES): Reorder list.
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* gnu/installer.scm (installer-steps): Add partitioning step.
* gnu/installer/newt.scm (newt-installer): Add partition-page field.
* gnu/installer/newt/partition.scm: New file.
* gnu/installer/parted.scm: New file.
* gnu/installer/record (installer): New partition-page field.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add new files.
* po/guix/POTFILES.in: Add new files.
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* gnu/installer/user.scm: New file.
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* gnu/installer/hostname.scm: New file.
* gnu/installer.scm (installer-program): Use new module above.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add new file.
* po/guix/POTFILES.in: Add new file.
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Add a page to select services, for now only desktop environments choice is
available.
* gnu/installer.scm (steps): Add services step.
* gnu/installer/newt.scm (newt-installer): Add services-page field.
* gnu/installer/newt/services.scm: New file.
* gnu/installer/record.scm (installer): Add services-page field.
* gnu/installer/services.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add new files.
* po/guix/POTFILES.in: Add new files.
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* gnu/installer.scm (installer-steps): Add configuration-formatter procedures.
* gnu/installer/final.scm: New file.
* gnu/installer/locale.scm (locale->configuration): New exported procedure.
* gnu/installer/newt.scm (newt-installer): Add final page.
* gnu/installer/newt/final.scm: New file.
* gnu/installer/record.scm (installer): Add final-page field.
* gnu/installer/timezone.scm (posix-tz->configuration): New exported
procedure.
* gnu/installer/steps.scm (installer-step): Rename configuration-proc field to
configuration-formatter.
(%installer-configuration-file): New exported parameter,
(%installer-target-dir): ditto,
(%configuration-file-width): ditto,
(format-configuration): new exported procedure,
(configuration->file): new exported procedure.
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* gnu/installer.scm: Rename to ...
* gnu/installer/record.scm: ... this.
* gnu/installer/build-installer.scm: Move everything to the build side and
rename to gnu/installer.scm.
* gnu/installer/newt.scm: Remove all the gexps and add depencies to newt
modules as this code will only be used on the build side by now.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adapt it,
(dist_installer_DATA): New rule to install installer's aux-files.
* gnu/system/install.scm (%installation-services): Use only
'installer-program' from (gnu installer). The installer is now choosen on the
build side.
* guix/self.scm (*system-modules*): Restore previous behaviour and add all
installer files to #:extra-files field of the scheme-node.
* po/guix/POTFILES.in: Adapt it.
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Only build installer if "--enable-installer" is passed. In that case only, the
support for Guile-newt becomes mandatory.
* configure.ac: Add --enable-installer argument. Export ENABLE_INSTALLER
conditional according to the argument value.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove installer modules and build them
only if ENABLE_INSTALLER is set.
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* configure.ac: Require that guile-newt is available.
* gnu/installer.scm: New file.
* gnu/installer/aux-files/logo.txt: New file.
* gnu/installer/build-installer.scm: New file.
* gnu/installer/connman.scm: New file.
* gnu/installer/keymap.scm: New file.
* gnu/installer/locale.scm: New file.
* gnu/installer/newt.scm: New file.
* gnu/installer/newt/ethernet.scm: New file.
* gnu/installer/newt/hostname.scm: New file.
* gnu/installer/newt/keymap.scm: New file.
* gnu/installer/newt/locale.scm: New file.
* gnu/installer/newt/menu.scm: New file.
* gnu/installer/newt/network.scm: New file.
* gnu/installer/newt/page.scm: New file.
* gnu/installer/newt/timezone.scm: New file.
* gnu/installer/newt/user.scm: New file.
* gnu/installer/newt/utils.scm: New file.
* gnu/installer/newt/welcome.scm: New file.
* gnu/installer/newt/wifi.scm: New file.
* gnu/installer/steps.scm: New file.
* gnu/installer/timezone.scm: New file.
* gnu/installer/utils.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add previous files.
* gnu/system.scm: Export %root-account.
* gnu/system/install.scm (%installation-services): Use kmscon instead of linux
VT for all tty.
(installation-os)[users]: Add the graphical installer as shell of the root
account.
[packages]: Add font related packages.
* po/guix/POTFILES.in: Add installer files.
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* gnu/packages/patches/kmscon-runtime-keymap-switch.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/terminals.scm (kmscon)[source]: Add patch.
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* gnu/packages/emacs.scm: Move almost all packages from here...
* gnu/packages/emacs-xyz.scm: ...to this new module.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/ocaml.scm,
gnu/packages/package-management.scm,
gnu/packages/statistics.scm: Update module references.
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* gnu/packages/databases.scm (gdbm, bdb, bdb-5.3): Move from here...
* gnu/packages/dbm.scm: ...to this new module.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/audio.scm,
gnu/packages/avahi.scm,
gnu/packages/backup.scm,
gnu/packages/cobol.scm,
gnu/packages/cyrus-sasl.scm,
gnu/packages/databases.scm,
gnu/packages/finance.scm,
gnu/packages/game-development.scm,
gnu/packages/gnome.scm,
gnu/packages/guile.scm,
gnu/packages/ibus.scm,
gnu/packages/kerberos.scm,
gnu/packages/linux.scm,
gnu/packages/mail.scm,
gnu/packages/man.scm,
gnu/packages/nvi.scm,
gnu/packages/openldap.scm,
gnu/packages/package-management.scm,
gnu/packages/php.scm,
gnu/packages/pulseaudio.scm,
gnu/packages/python.scm,
gnu/packages/rdf.scm,
gnu/packages/ruby.scm,
gnu/packages/sawfish.scm: Update module references.
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* gnu/packages/databases.scm (sqlite, sqlite-3.26.0, sqlite-with-fts5,
sqlite-with-column-metadata): Move variables from here...
* gnu/packages/sqlite.scm: ...to this new module.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/apl.scm,
gnu/packages/bittorrent.scm,
gnu/packages/calendar.scm,
gnu/packages/code.scm,
gnu/packages/crypto.scm,
gnu/packages/databases.scm,
gnu/packages/dc.scm,
gnu/packages/disk.scm,
gnu/packages/ebook.scm,
gnu/packages/education.scm,
gnu/packages/emacs.scm,
gnu/packages/emulators.scm,
gnu/packages/file-systems.scm,
gnu/packages/freedesktop.scm,
gnu/packages/ftp.scm,
gnu/packages/games.scm,
gnu/packages/geo.scm,
gnu/packages/gnome.scm,
gnu/packages/gnunet.scm,
gnu/packages/gnupg.scm,
gnu/packages/gnuzilla.scm,
gnu/packages/gps.scm,
gnu/packages/guile.scm,
gnu/packages/ibus.scm,
gnu/packages/kerberos.scm,
gnu/packages/kodi.scm,
gnu/packages/lisp.scm,
gnu/packages/mail.scm,
gnu/packages/messaging.scm,
gnu/packages/mpd.scm,
gnu/packages/music.scm,
gnu/packages/networking.scm,
gnu/packages/nfs.scm,
gnu/packages/ocaml.scm,
gnu/packages/package-management.scm,
gnu/packages/pdf.scm,
gnu/packages/photo.scm,
gnu/packages/php.scm,
gnu/packages/python.scm,
gnu/packages/qt.scm,
gnu/packages/ruby.scm,
gnu/packages/scheme.scm,
gnu/packages/sync.scm,
gnu/packages/syndication.scm,
gnu/packages/version-control.scm,
gnu/packages/video.scm,
gnu/packages/web-browsers.scm,
gnu/packages/webkit.scm: Adjust module references.
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* gnu/packages/kodi.scm (kodi)[source]: Add patch.
* gnu/packages/patches/kodi-skip-test-449.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
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* gnu/packages/compression.scm (python-lzo, python2-lzo, python-lz4,
python2-lz4, python-lzstring, python2-lzstring, bitshuffle,
bitshuffle-for-snappy): Move variables from here...
* gnu/packages/python-compression.scm: ...to this new module.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/bioinformatics.scm,
gnu/packages/java-compression.scm,
gnu/packages/xorg.scm: Adjust module references.
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* gnu/packages/python.scm: Move hundreds of package definitions from here...
* gnu/packages/python-xyz.scm: ...to this new module.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/ada.scm,
gnu/packages/admin.scm,
gnu/packages/android.scm,
gnu/packages/audio.scm,
gnu/packages/backup.scm,
gnu/packages/benchmark.scm,
gnu/packages/bioinformatics.scm,
gnu/packages/bittorrent.scm,
gnu/packages/calendar.scm,
gnu/packages/check.scm,
gnu/packages/chemistry.scm,
gnu/packages/cluster.scm,
gnu/packages/compression.scm,
gnu/packages/connman.scm,
gnu/packages/crypto.scm,
gnu/packages/cups.scm,
gnu/packages/databases.scm,
gnu/packages/dav.scm,
gnu/packages/direct-connect.scm,
gnu/packages/disk.scm,
gnu/packages/django.scm,
gnu/packages/dlang.scm,
gnu/packages/docker.scm,
gnu/packages/ebook.scm,
gnu/packages/elf.scm,
gnu/packages/emacs.scm,
gnu/packages/emulators.scm,
gnu/packages/engineering.scm,
gnu/packages/enlightenment.scm,
gnu/packages/finance.scm,
gnu/packages/fltk.scm,
gnu/packages/fontutils.scm,
gnu/packages/freedesktop.scm,
gnu/packages/game-development.scm,
gnu/packages/games.scm,
gnu/packages/geo.scm,
gnu/packages/gl.scm,
gnu/packages/glib.scm,
gnu/packages/gnome.scm,
gnu/packages/gnupg.scm,
gnu/packages/gnuzilla.scm,
gnu/packages/graph.scm,
gnu/packages/graphics.scm,
gnu/packages/graphviz.scm,
gnu/packages/gtk.scm,
gnu/packages/ham-radio.scm,
gnu/packages/image-processing.scm,
gnu/packages/image-viewers.scm,
gnu/packages/image.scm,
gnu/packages/irc.scm,
gnu/packages/jrnl.scm,
gnu/packages/julia.scm,
gnu/packages/kde-frameworks.scm,
gnu/packages/key-mon.scm,
gnu/packages/libffi.scm,
gnu/packages/libreoffice.scm,
gnu/packages/libusb.scm,
gnu/packages/lirc.scm,
gnu/packages/logging.scm,
gnu/packages/machine-learning.scm,
gnu/packages/mail.scm,
gnu/packages/mate.scm,
gnu/packages/maths.scm,
gnu/packages/medical.scm,
gnu/packages/messaging.scm,
gnu/packages/monitoring.scm,
gnu/packages/mp3.scm,
gnu/packages/mpd.scm,
gnu/packages/music.scm,
gnu/packages/networking.scm,
gnu/packages/nutrition.scm,
gnu/packages/openldap.scm,
gnu/packages/openstack.scm,
gnu/packages/package-management.scm,
gnu/packages/password-utils.scm,
gnu/packages/patchutils.scm,
gnu/packages/pdf.scm,
gnu/packages/photo.scm,
gnu/packages/polkit.scm,
gnu/packages/protobuf.scm,
gnu/packages/python-crypto.scm,
gnu/packages/python-web.scm,
gnu/packages/qt.scm,
gnu/packages/rdf.scm,
gnu/packages/ruby.scm,
gnu/packages/search.scm,
gnu/packages/selinux.scm,
gnu/packages/serialization.scm,
gnu/packages/shells.scm,
gnu/packages/simulation.scm,
gnu/packages/ssh.scm,
gnu/packages/statistics.scm,
gnu/packages/storage.scm,
gnu/packages/sync.scm,
gnu/packages/terminals.scm,
gnu/packages/textutils.scm,
gnu/packages/time.scm,
gnu/packages/tls.scm,
gnu/packages/tor.scm,
gnu/packages/tryton.scm,
gnu/packages/version-control.scm,
gnu/packages/video.scm,
gnu/packages/virtualization.scm,
gnu/packages/vpn.scm,
gnu/packages/web-browsers.scm,
gnu/packages/web.scm,
gnu/packages/wicd.scm,
gnu/packages/xdisorg.scm,
gnu/packages/xorg.scm: Update module references.
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This was forgotten in ab533c613ee2a44595786a6aca0b958f9f7f1dd9.
* gnu/local.mk (dist_patch_DATA): Add
"allegro-fix-compilation-mesa-18.2.5-and-later.patch".
Signed-off-by: Jonathan Brielmaier <jbrielmaier@suse.de>
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* gnu/packages/patches/libssh-hostname-parser-bug.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/ssh.scm (libssh): Update to 0.8.6.
[source](patches): Remove.
[arguments]: Add #:phases.
(guile-ssh)[source](modules, snippet]: New fields.
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* gnu/packages/compression.scm (perl-compress-raw-bzip2,
perl-compress-raw-zlib, perl-io-compress, perl-archive-zip,
perl-archive-extract): Move from here...
* gnu/packages/perl-compression.scm: ...to this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/ci.scm, gnu/packages/libreoffice.scm, gnu/packages/perl.scm:
Adjust references.
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* gnu/packages/image-processing.scm (opencv)[native-inputs]: Add patch
to opencv-contrib.
[arguments]: Update 'unpack-submodule-sources phase.
* gnu/packages/patches/opencv-rgbd-aarch64-test-fix.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
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* gnu/packages/compression.scm (bitshuffle-for-snappy): Export variable.
(java-snappy, java-snappy-1, java-iq80-snappy, java-jbzip2, java-tukaani-xz):
Move these variables from here...
* gnu/packages/java-compression.scm: ...to this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/java.scm, gnu/packages/bioinformatics.scm: Adjust module
references.
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This is a followup to 7d8a4eeacc534c8742e0b22d855aa73e5ab66b7f.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add gnu/tests/docker.scm.
* gnu/tests/docker.scm: Update copyright line.
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* gnu/services/docker.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Miscellaneous Services): Document the service.
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* gnu/packages/docker.scm (docker): New variable.
* gnu/packages/patches/docker-engine-test-noinstall.patch: New file.
* gnu/packages/patches/docker-fix-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add them.
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* gnu/packages/patches/aria2-CVE-2019-3500.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/bittorrent.scm (aria2)[source]: Use it.
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* gnu/packages/tex.scm (biber): Update to 2.12.
[source]: Use 'git-fetch'. Add patch.
[inputs]: Add perl-file-slurper. Remove perl-file-slurp.
* gnu/packages/patches/biber-fix-encoding-write.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
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* gnu/packages/jose.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
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CVE-2018-{1000877,1000878,1000880}.
* gnu/packages/backup.scm (libarchive)[source, home-page]: Use HTTPS.
[replacement]: New field.
(libarchive-3.3.3): New variable.
* gnu/packages/patches/libarchive-CVE-2018-1000877.patch,
gnu/packages/patches/libarchive-CVE-2018-1000878.patch,
gnu/packages/patches/libarchive-CVE-2018-1000880.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
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* build-aux/hydra/gnu-system.scm: Move code to...
* gnu/ci.scm: ... here. New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
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* gnu/packages/unrtf.scm (unrtf): Update to 0.21.10.
[source]: Remove patch, remove snippet.
[license]: Update to gpl3+.
* gnu/packages/patches/unrtf-CVE-2016-10091.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
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* gnu/packages/video.scm (streamlink)[source]: Add patch.
* gnu/packages/patches/streamlink-update-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
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Transfer the NixOS patches for kpackage as of 2018-02-17:
- Allow external paths.
- Make QDirIterator follow symlinks.
Decided to use a patch for one of the "allow external paths" changes since
'substitute*' seems not to be robust enough.
* gnu/packages/patches/kpackage-allow-external-paths.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/kde-frameworks.scm(kpackage)[source]: Use it. <patch>: New
phase.
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Transfer the NixOS "kdeinit-libpath" patch for kinit as of
2018-02-17.
* gnu/packages/patches/kinit-kdeinit-libpath.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/kde-frameworks.scm (kinit)[source]: Use it.
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Transfer the NixOS "kdeinit-extra_libs" patch for kinit as of
2018-02-17.
* gnu/packages/patches/kinit-kdeinit-extra_libs.patch: New filee.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/kde-frameworks.scm (kinit)[source]: Use it.
<patch-paths>: New phase.
[inputs]: Add kparts, plasma-framework.
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Transfer the remaining NixOS patch for kio as of 2018-02-17.
* gnu/packages/patches/kio-search-smbd-on-PATH.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/kde-frameworks.scm(kio)<source>: Use it.
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* gnu/packages/patches/libextractor-CVE-2018-20430.patch,
gnu/packages/patches/libextractor-CVE-2018-20431.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/gnunet.scm (libextractor)[source]: Use them.
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* gnu/packages/bootloaders.scm (vboot-utils)[source]: Add patches.
[arguments]: Conditionally add "HOST_ARCH=arm" to #:make-flags.
* gnu/packages/patches/vboot-utils-fix-format-load-address.patch,
gnu/packages/patches/vboot-utils-fix-tests-show-contents.patch,
gnu/packages/patches/vboot-utils-skip-test-workbuf.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
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Fixes issue #32057 (see: https://issues.guix.info/issue/32057).
* gnu/packages/patches/gnucash-fix-test-transaction-failure.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gnucash.scm (gnucash): Use it.
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* gnu/packages/gnome.scm (vinagre)[source]: Update patches.
[arguments]: Add custom phase to replace 'freerdp' with
'freerdp2'. Remove configure flags.
* gnu/packages/patches/vinagre-revert-1.patch,
gnu/packages/patches/vinagre-revert-2.patch: Remove files.
* gnu/packages/patches/vinagre-newer-freerdp.patch,
gnu/packages/patches/vinagre-newer-rdp-parameters.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register changes.
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* gnu/packages/patches/file-CVE-2018-10360.patch: New file.
* gnu/packages/file.scm (file)[replacement]: New field.
(file/fixed): New variable.
* gnu/packages/commencement.scm (file-boot0): Use 'package/inherit' to
receive security fixes.
* gnu/local.mk (dist_patch_DATA): Register it.
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