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Fixes <https://bugs.gnu.org/34454>.
* gnu/packages/patches/gtk3-fix-deprecation-macro-use.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gtk.scm (gtk+/fixed): New variable.
(gtk+)[replacement]: New field.
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* gnu/packages/screen.scm (reptyr): Update to 0.7.0.
[source]: Remove patch.
[arguments]: Add bash completion directory name.
* gnu/packages/patches/reptyr-fix-gcc-7.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
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Fixes <https://bugs.gnu.org/34333>.
Reported by Allan Adair <allan@adair.io>.
* gnu/packages/patches/docker-use-fewer-modprobes.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/docker.scm (docker)[source]: Use it.
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* gnu/system/keyboard.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu.scm (%public-modules): Add it.
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* gnu/packages/perl6.scm (moarvm): New variable.
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* gnu/packages/music.scm (libmygpo-qt): Move to 'gpodder.scm'.
* gnu/packages/gpodder.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/ssh.scm (dropbear): Update to 2019.77.
[source]: Remove patch.
* gnu/packages/patches/dropbear-CVE-2018-15599.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
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* gnu/packages/patches/libgit2-avoid-python.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/version-control.scm (libgit2)[source]: Use it.
[inputs]: Remove python.
[native-inputs]: Add guile-2.2.
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* gnu/packages/elixir.scm (elixir): Update to 1.8.1.
[source](patches): New field.
[home-page]: Use HTTPS.
* gnu/packages/patches/elixir-path-length.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
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* gnu/packages/patches/libgit2-oom-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/version-control.scm (libgit2): Update to 0.28.1.
[source](patches): Remove 'libgit2-oom-test.patch'.
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Fixes <https://bugs.gnu.org/33882>.
* gnu/packages/graphics.scm (blender-2.79): New variable.
(blender)[description]: Remove obsolete claim that the stable
release no longer works in Guix.
* gnu/packages/patches/blender-2.79-newer-ffmpeg.patch,
gnu/packages/patches/blender-2.79-python-3.7-fix.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
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* gnu/services/authentication.scm (nslcd-service-type, nslcd-configuration,
%nslcd-accounts): New variables.
(uglify-field-name, value->string, serialize-field, serialize-list,
ssl-option?, tls-reqcert-option?, deref-option?,
comma-separated-list-of-strings?, serialize-ignore-users-option, log-option?,
serialize-log-option, valid-map?, scope-option?, serialize-scope-option,
map-entry?, list-of-map-entries?, filter-entry?, list-of-filter-entries?,
serialize-filter-entry, serialize-list-of-filter-entries, serialize-map-entry,
serialize-list-of-map-entries, nslcd-config-file, nslcd-etc-service,
nslcd-shepherd-service, pam-ldap-pam-services, pam-ldap-pam-service,
generate-nslcd-documentation): New procedures.
* gnu/tests/ldap.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (LDAP Services): Document it.
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* gnu/packages/dns.scm (knot): Update to 2.8.0.
[source]: Add patch.
* gnu/packages/patches/knot-include-system-lmdb-header.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
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* gnu/packages/algebra.scm (python-flint): New variable.
* gnu/packages/patches/python-flint-includes.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register the patch.
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* gnu/packages/password-utils.scm (cracklib): Update to 2.9.7.
[source]: Remove patches.
* gnu/packages/patches/cracklib-CVE-2016-6318.patch,
gnu/packages/patches/cracklib-fix-buffer-overflow.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove them.
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* gnu/packages/gnunet (libextractor): Update to 1.9.
[source]: Remove patches.
* gnu/packages/patches/libextractor-CVE-2018-20430.patch
gnu/packages/patches/libextractor-CVE-2018-20431.patch:
Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
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* gnu/packages/patches/pugixml-versioned-libdir.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/xml.scm (pugixml)[source](patches): New field.
[arguments]: Instruct the build system to create a shared rather than static
library.
[native-inputs]: Add PKG-CONFIG.
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* gnu/local.mk (hyperledger): New variable.
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* gnu/packages/bioinformatics.scm (blast+): Update to 2.7.1.
[inputs]: Add lmdb.
[source]: Remove obsolete patch.
* gnu/package/patches/blast+-fix-makefile.patch: Remove patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
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* gnu/build/accounts.scm, tests/accounts.scm: New files.
* Makefile.am (SCM_TESTS): Add tests/accounts.scm.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add build/accounts.scm.
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The (gnu system accounts) module is meant to be used both on the build-
and on the host-side.
* gnu/system/shadow.scm <top level>: Call 'default-shell'.
(<user-account>, <user-group>): Move to...
* gnu/system/accounts.scm: ... here. New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add system/accounts.scm.
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* gnu/patches/rust-1.30-gdb-llvm.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/rust.scm (rust): Rename to...
(rust-1.29): ...this.
(rust-1.30): New variable.
(rust): New variable.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
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* gnu/packages/admin.scm (thermald): Update to 1.8.
[source]: Add patch.
* gnu/packages/patches/thermald-make-int-max32-visible.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
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* gnu/packages/java-maths.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
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* gnu/packages/patches/lyx-2.2.3-fix-test.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
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* gnu/packages/arcan.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/video.scm (libopenshot)[source]: Add patch.
* gnu/packages/patches/libopenshot-fixup-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
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* gnu/packages/tls.scm (openssl)[replacement]: New field.
(openssl/fixed): New variable.
(openssl-next)[inherit]: Inherit from it instead.
* gnu/packages/patches/openssl-CVE-2019-1559.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
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* gnu/packages/netpbm.scm (netpbm)[source]: Add patches.
* gnu/packages/patches/netpbm-CVE-2017-2586.patch,
gnu/packages/patches/netpbm-CVE-2017-2587.patch: New files.
* gnu/local.mk: Fix missing copyright year.
(dist_patch_DATA): Add them.
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* gnu/packages/patches/wpa-supplicant-CVE-2017-13082.patch,
gnu/packages/patches/wpa-supplicant-CVE-2018-14526.patch,
gnu/packages/patches/wpa-supplicant-fix-key-reuse.patch,
gnu/packages/patches/wpa-supplicant-fix-nonce-reuse.patch,
gnu/packages/patches/wpa-supplicant-fix-zeroed-keys.patch,
gnu/packages/patches/wpa-supplicant-krack-followups.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/admin.scm (wpa-supplicant-minimal): Update to 2.7.
[source](patches): Remove.
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* gnu/packages/mastodon.scm (toot): New variable.
* gnu/local.mk (GNU_SYSTSEM_MODULES): Register it.
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* gnu/packages/games.scm (wesnoth): Update to 1.14.6.
[source]: Remove upstreamed patch.
* packages/patches/wesnoth-newer-boost.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
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* gnu/packages/music.scm (musescore): Update to 3.0.3.
[source]: Remove now obsolete patch.
[arguments]: Do not use bundled (as a submodule) libcrashreporter-qt.
* gnu/packages/patches/musescore-fix-use_webengine.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Apply file removal.
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* gnu/packages/multiprecision.scm (libtommath): New variable.
* gnu/packages/patches/libtommath.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
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* gnu/packages/patches/xmodmap-asprintf.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/xorg.scm (xmodmap): Update to 1.0.10.
[source](patches): Remove.
[home-page]: Set to source repository.
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* gnu/packages/gd.scm (gd)[replacement]: New field.
(gd/fixed): New variable.
* gnu/packages/patches/gd-CVE-2019-6977.patch,
gnu/packages/patches/gd-CVE-2019-6978.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
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* gnu/packages/magic-wormhole.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
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* gnu/packages/aux-files/chromium/master-preferences.json,
gnu/packages/chromium.scm: New files.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
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* gnu/packages/multiprecision.scm (tomsfastmath): Update to 0.13.1.
[source]: Remove patch.
* gnu/packages/patches/tomsfastmath-constness.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
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* gnu/packages/patches/xf86-video-i128-remove-mibstore.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/xorg.scm (xf86-video-i128): Update to 1.4.0.
[source](patches): Remove.
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* gnu/packages/gnupg.scm (pius): Update to 2.2.7.
[source]: Remove upstreamed patch.
* gnu/packages/patches/pius.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
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* gnu/packages/genimage.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
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* gnu/packages/patches/clang-7.0-libc-search-path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/llvm.scm (llvm, clang-runtime, clang): Update to 7.0.1.
(llvm-7.0.1): Remove variable.
(clang-from-llvm)[arguments]: Adjust phase to match Clang 7.
(llvm-6, clang-runtime-6, clang-6): New public variables.
* gnu/packages/dlang.scm (ldc)[native-inputs]: Change LLVM and CLANG to
LLVM-6.0 and CLANG-6.0.
* gnu/packages/gl.scm (mesa)[inputs]: Change from LLVM to LLVM-6.
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* gnu/packages/game-development.scm (allegro-4): Update to 4.4.3.
[source]: Remove upstreamed patch.
* gnu/packages/patches/allegro4-mesa-18.2.5-and-later.patch:
Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
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Patch ruby-safe-yaml to fix an issue that would lead to an error like this:
uninitialized constant SafeYAML::Parse::Date::DateTime
It's been reported upstream [1], and this patch was taken from the upstream Git
repository.
1: https://github.com/dtao/safe_yaml/issues/80
* gnu/packages/ruby.scm (ruby-safe-yaml)[source]: Switch to the Git repository
so that applying patches works and add a patch.
[arguments]: Enable tests and add a phase to set the TZ environment variable,
as one of the tests depends on a certian timezone.
* gnu/packages/patches/ruby-safe-yaml-add-require-time.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add new patch file.
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* gnu/packages/patches/dealii-mpi-deprecations.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (dealii)[source]: Upgrade to 9.0.1. Use patch.
[arguments]: Use new MPI configuration flags.
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Fixes <https://bugs.gnu.org/34431>.
* gnu/packages/patches/qtbase-old-kernel.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register patch.
* gnu/packages/qt.scm (qtbase): Add patch.
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* gnu/packages/patches/scalapack-blacs-mpi-deprecations.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (scalapack)[source]: Use it.
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* gnu/packages/finance.scm (ledger): Update to 3.1.2.
[arguments]: Remove #:modules; remove obsolete configure flags; remove make
flags; remove phase "boost-compat"; remove custom check phase; remove
"relocate-elisp" phase; disable broken test in "check-setup" phase.
[native-inputs]: Remove emacs-minimal.
[license]: Remove gpl2+.
* gnu/packages/patches/ledger-revert-boost-python-fix.patch: Remove patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
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Add a patch from the upstream repository [1] that resolves some errors that
prevent the package from building [2].
1: https://github.com/red-eclipse/base/commit/b16b4963c1ad81bb9ef784bc49
2: error: ‘____gammal_r_finite’ was not declared in this scope
* gnu/packages/games.scm (red-eclipse)[source] Add patch.
* gnu/packages/patches/red-eclipse-remove-gamma-name-hack.patch: New file
* gnu/local.mk (dist_patch_DATA): Add new patch.
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