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2017-07-10gnu: hop: Update to 3.1.0-pre2.Kei Kebreau
* gnu/packages/scheme.scm (hop): Update to 3.1.0-pre2. [source]: Remove unnecessary patch. [arguments]: Enable tests; disable parallel building; specify BIGLOO in make-flags. [inputs]: Add libgc, libunistring, libuv, pcre and sqlite. * gnu/local.mk (dist_patch_DATA): Remove unnecessary patch. * gnu/packages/patches/hop-linker-flags.patch: Delete file.
2017-07-10gnu: bigloo: Update to 4.3a.Kei Kebreau
* gnu/packages/scheme.scm (bigloo): Update to 4.3a. [source]: Remove old patch. Add snippet. [arguments]: Adjust the build phases accordingly. [inputs]: Add libgc, libunistring, libuv, openssl, pcre and sqlite.
2017-07-10gnu: libtiff: Fix two integer overflows.Leo Famulari
* gnu/packages/patches/libtiff-tiffycbcrtorgb-integer-overflow.patch, gnu/packages/patches/libtiff-tiffycbcrtorgbinit-integer-overflow.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/image.scm (libtiff-4.0.8)[source]: Use them.
2017-07-10gnu: ncurses: Fix CVE-2017-10684 and CVE-2017-10685.Leo Famulari
* gnu/packages/patches/ncurses-CVE-2017-10684-10685.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/ncurses.scm (ncurses)[replacement]: New field. (ncurses/fixed): New variable.
2017-07-10gnu: poppler: Fix null pointer dereferences.Mark H Weaver
* gnu/packages/patches/poppler-fix-crash-with-broken-documents.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/pdf.scm (poppler/fixed)[source]: Add the patch.
2017-07-09gnu: dblatex: Use texlive-union.Ricardo Wurmus
* gnu/packages/patches/dblatex-remove-multirow.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/docbook.scm (dblatex)[source]: Use patch. [inputs]: Replace "texlive" with a texlive-union.
2017-07-09gnu: poppler: Use an ABI-compatible replacement to fix CVE-2017-9776.Leo Famulari
This is a followup to commit 95bbaa02aa63bc5eae36f686f1ed9915663aa4cf. See <https://bugs.gnu.org/27621> for more information. Poppler 0.56.0's ABI is not compatible with Poppler 0.52.0, so it's not possible to graft the newer version in place of the older one. This change leaves CVE-2017-9775 unfixed for now. * gnu/packages/patches/poppler-CVE-2017-9776.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/pdf.scm (poppler-0.56.0): Replace with ... (poppler/fixed): ... new variable. (poppler)[replacement]: Replaced with poppler/fixed.
2017-07-08gnu: blast+: Update to 2.6.0.Ben Woodcroft
* gnu/packages/bioinformatics.scm (blast+): Update to 2.6.0. [origin]: Remove bundled pcre. Add patch. [arguments]: Replace paths in run_with_lock.c. Configure with pcre. [inputs]: Add pcre, perl, python. * gnu/packages/patches/blast+-fix-makefile.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2017-07-07gnu: python-pyopenssl: Fix test failure on 32-bit platforms.Marius Bakke
* gnu/packages/patches/python-pyopenssl-17.1.0-test-overflow.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/python.scm (python-pyopenssl)[source]: Use it.
2017-07-07gnu: libtiff: Fix CVE-2017-{9936,10688}.Alex Vong
* gnu/packages/patches/libtiff-CVE-2017-9936.patch, gnu/packages/patches/libtiff-CVE-2017-10688.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/image.scm (libtiff-4.0.8)[source]: Use them. Signed-off-by: Leo Famulari <leo@famulari.name>
2017-07-06gnu: xorg-server: Fix CVE-2017-{10971,10972}.Kei Kebreau
* gnu/packages/patches/xorg-server-CVE-2017-10971.patch, gnu/packages/patches/xorg-server-CVE-2017-10972.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/xorg.scm (xorg-server)[source]: Use them. Signed-off-by: Leo Famulari <leo@famulari.name>
2017-07-04gnu: gemma: Fix building on non-Intel architectures.Efraim Flashner
* gnu/packages/patches/gemma-intel-compat.patch: New file. * gnu/packages/bioinformatics.scm (gemma)[source]: Add patch. [arguments]: Add NO_INTEL_COMPAT flag on non-Intel architectures. * gnu/local.mk (dist_patch_DATA): Register patch.
2017-07-04gnu: gajim: Update to 0.16.8.Arun Isaac
* gnu/packages/messaging.scm (gajim): Update to 0.16.8. [source]: Remove patch. * gnu/packages/patches/gajim-CVE-2016-10376.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2017-07-04services: Add 'sysctl-service-type'.宋文武
* gnu/services/sysctl.scm: New file. * doc/guix.texi (Miscellaneous Services): Document it. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2017-07-04gnu: python-pyopenssl: Update to 17.1.0.Marius Bakke
* gnu/packages/python.scm (python-pyopenssl, python2-pyopenssl): Update to 17.1.0. [source]: Remove patch. [native-inputs]: Add PYTHON-PRETEND. [arguments]<#:phases>: Disable the network test here instead of via a patch. Also disable one new test. * gnu/packages/patches/python-pyopenssl-skip-network-test.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2017-07-03gnu: gcr: Enable working tests.Kei Kebreau
* gnu/packages/patches/gcr-disable-failing-tests.patch, gnu/packages/patches/gcr-fix-collection-tests-to-work-with-gpg-21.patch: New files. * gnu/local.mk (dist_patch_DATA): Add patches. * gnu/packages/gnome.scm (gcr)[source]: Use patches. [arguments]: Enable tests.
2017-06-29gnu: ansible: Apply experimental patch to deal with wrapping of ansible script.Jelle Licht
See <http://lists.gnu.org/archive/html/bug-guix/2017-05/msg00015.html> for the rationale. * gnu/packages/patches/ansible-wrap-program-hack.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/admin.scm (ansible)[source]: Use it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-06-28gnu: screen: Update to 4.6.0.Eric Bavier
* gnu/packages/screen.scm (screen): Update to 4.6.0. [source]: Remove patch. * gnu/packages/patches/screen-fix-info-syntax-error.patch: Delete patch. * gnu/local.mk (dist_patch_DATA): Remove it.
2017-06-26gnu: Add quagga.Gábor Boskovits
* gnu/packages/networking.scm (quagga): New variable. * gnu/packages/patches/quagga-reproducible-build.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-06-25gnu: glibc: Fix replacement on i686.Mark H Weaver
This is followup to 665d6a59161769e10b52ffcbcd5cd2db22f32681. Fixes <https://bugs.gnu.org/27489>. * gnu/packages/base.scm (glibc-2.25-patched, glibc-2.24, glibc-2.23) (glibc-2.22): Add glibc-vectorized-strcspn-guards.patch to patches. Move a comment where it belongs. * gnu/packages/patches/glibc-CVE-2017-1000366-pt2.patch: Swap with ... * gnu/packages/patches/glibc-CVE-2017-1000366-pt3.patch: ... this. * gnu/packages/patches/glibc-vectorized-strcspn-guards.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Fix formatting.
2017-06-24gnu: Remove libwmf.Leo Famulari
This package contains many security vulnerabilities and is no longer maintained upstream. See this discussion for more information: https://lists.gnu.org/archive/html/guix-devel/2017-05/msg00478.html * gnu/packages/image.scm (libwmf): Remove variable. * gnu/packages/wv.scm (wv)[inputs]: Remove libwmf. [arguments]: Remove field. * gnu/packages/abiword.scm (abiword)[inputs]: Remove libwmf. [source]: Remove patch 'abiword-wmf-version-lookup-fix.patch'. * gnu/packages/patches/abiword-wmf-version-lookup-fix.patch, gnu/packages/patches/libwmf-CAN-2004-0941.patch, gnu/packages/patches/libwmf-CVE-2006-3376.patch, gnu/packages/patches/libwmf-CVE-2007-0455.patch, gnu/packages/patches/libwmf-CVE-2007-2756.patch, gnu/packages/patches/libwmf-CVE-2007-3472.patch, gnu/packages/patches/libwmf-CVE-2007-3473.patch, gnu/packages/patches/libwmf-CVE-2007-3477.patch, gnu/packages/patches/libwmf-CVE-2009-1364.patch, gnu/packages/patches/libwmf-CVE-2009-3546.patch, gnu/packages/patches/libwmf-CVE-2015-0848+CVE-2015-4588.patch, gnu/packages/patches/libwmf-CVE-2015-4695.patch, gnu/packages/patches/libwmf-CVE-2015-4696.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
2017-06-24gnu: glibc: Add mitigations for CVE-2017-1000366.Efraim Flashner
* gnu/packages/base.scm (glibc/linux)[replacement]: New field. (glibc-2.25-patched): New variable. (glibc-2.24, glibc-2.23, glibc-2.22, glibc-2.21)[source]: Add patches. [replacement]: New field. (glibc-locales)[replacement]: New field. * gnu/packages/patches/glibc-CVE-2017-1000366-pt1.patch, gnu/packages/patches/glibc-CVE-2017-1000366-pt2.patch, gnu/packages/patches/glibc-CVE-2017-1000366-pt3.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. Modified-By: Mark H Weaver <mhw@netris.org>
2017-06-24gnu: guile-ssh: Fix entry in dist_patch_DATA.Mark H Weaver
Based on a patch by Efraim Flashner <efraim@flashner.co.il>. * gnu/local.mk (dist_patch_DATA): "gnu" -> "%D%" for guile-ssh-channel-finalization.patch.
2017-06-24gnu: Add libserialport.Theodoros Foradis
* gnu/packages/electronics.scm: New file. (libserialport): New variable. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2017-06-23gnu: qemu: Fix CVE-2017-9524.Leo Famulari
* gnu/packages/patches/qemu-CVE-2017-9524.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/qemu.scm (qemu)[source]: Use it.
2017-06-22gnu: Update calibre to 3.0.0.Roel Janssen
* gnu/local.mk: Remove patch. * gnu/packages/ebook.scm (calibre): Update to 3.0.0. * gnu/packages/patches/calibre-dont-load-remote-icons.patch: Remove file.
2017-06-20gnu: Move contents of zip module into compression module.Arun Isaac
* gnu/packages/zip.scm (zip, unzip, zziplib, perl-zip): Move to... * gnu/packages/compression.scm: ...here. * gnu/packages/zip.scm: Delete file. * gnu/local.mk (GNU_SYSTEM_MODULES): Unregister deleted file. * po/packages/POTFILES.in: Unregister deleted file. * gnu/packages/{audio, avr, bioinformatics, busybox, cdrom, ci, compression, docbook, documentation, fonts, fpga, game-development, games, gl, gnome, gnuzilla, graphics, guile, haskell, image, java, kodi, ldc, libreoffice, markup, maths, mc, monitoring, music, php, pretty-print, python, scheme, smalltalk, statistics, synergy, tex, textutils, video, web-browsers, xml, zip}.scm, guix/build-system/{ant, font}.scm, guix/{download, packages}.scm: Adapt module import.
2017-06-19gnu: exim: Fix CVE-2017-1000369.Leo Famulari
* gnu/packages/patches/exim-CVE-2017-1000369.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/mail.scm (exim)[source]: Use it.
2017-06-18gnu: miniupnpc: Update to 2.0.20170509.Marius Bakke
* gnu/packages/upnp.scm (miniupnpc): Update to 2.0.20170509. [source]: Remove obsolete patch. * gnu/packages/patches/miniupnpc-CVE-2017-8798.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2017-06-15gnu: libtiff: Fix several bugs related to improper codec usage [security fixes].Leo Famulari
Fixes CVE-2014-8128, CVE-2015-7554, CVE-2016-5318, CVE-2016-10095, and the other bugs listed in 'libtiff-tiffgetfield-bugs.patch'. * gnu/packages/patches/libtiff-tiffgetfield-bugs.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/image.scm (libtiff-4.0.8)[source]: Use it.
2017-06-15gnu: zziplib: Fix CVE-2017-{5974,5975,5976,5978,5979,5981}.Leo Famulari
* gnu/packages/patches/zziplib-CVE-2017-5974.patch, gnu/packages/patches/zziplib-CVE-2017-5975.patch, gnu/packages/patches/zziplib-CVE-2017-5976.patch, gnu/packages/patches/zziplib-CVE-2017-5978.patch, gnu/packages/patches/zziplib-CVE-2017-5979.patch, gnu/packages/patches/zziplib-CVE-2017-5981.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/zip.scm (zziplib)[source]: Use them.
2017-06-15gnu: Add propeller-gcc-4.Ricardo Wurmus
* gnu/packages/embedded.scm (propeller-gcc-4): New variable. * gnu/packages/patches/gcc-4.6-gnu-inline.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2017-06-14gnu: osip: Fix CVE-2017-7853.Leo Famulari
* gnu/packages/patches/osip-CVE-2017-7853.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/telephony.scm (osip)[source]: Use it.
2017-06-13gnu: guile-ssh: Close RREPL channel ports before they are finalized.Ludovic Courtès
Partly fixes <https://bugs.gnu.org/26976>. * gnu/packages/patches/guile-ssh-channel-finalization.patch: New file. * gnu/packages/ssh.scm (guile-ssh)[source](patches): Use it. * gnu/local.mk (dist_patch_DATA): Add it.
2017-06-12gnu: nss, nss-certs: Update to 3.31.Marius Bakke
Release notes: <https://developer.mozilla.org/en-US/docs/Mozilla/Projects/NSS/NSS_3.31_release_notes> * gnu/packages/certs.scm (nss-certs): Update to 3.31. * gnu/packages/gnuzilla.scm (nss): Likewise. [source]<patches>: Remove upstream 'nss-disable-long-b64-tests' patch. [arguments]<#:phases>: Move armhf timeout substitution ... * gnu/packages/patches/nss-increase-test-timeout.patch: ... here. * gnu/packages/patches/nss-disable-long-b64-tests.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2017-06-12gnu: crawl: Fix savegame upgrades.nee
* gnu/packages/patches/crawl-upgrade-saves.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patch. * gnu/packages/games.scm (crawl)[source]: Apply patch. Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2017-06-12gnu: libmwaw: Fix CVE-2017-9433.Leo Famulari
* gnu/packages/patches/libmwaw-CVE-2017-9433.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/libreoffice.scm (libmwaw)[source]: Use it.
2017-06-11gnu: libextractor: Update to 1.4.Marius Bakke
* gnu/packages/gnunet.scm (libextractor): Update to 1.4. [source]: Remove obsolete patch and snippet. * gnu/packages/patches/libextractor-ffmpeg-3.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2017-06-11gnu: gnutls: Replace with 3.5.13.Marius Bakke
This update addresses the following security advisories: GNUTLS-SA-2017-3 (aka CVE-2017-7869) and GNUTLS-SA-2017-4. See <https://gnutls.org/security.html> and <https://gnutls.org/news.html>. * gnu/packages/patches/gnutls-skip-pkgconfig-test.patch, gnu/packages/patches/gnutls-skip-trust-store-test.patch: New files. * gnu/local.mk (dist_patch_DATA): Register patches. * gnu/packages/tls.scm (gnutls)[replacement]: New field. (gnutls-3.5.13): New variable. (gnutls/guile-2.2)[replacement]: New field. Set #f. [source]: Inherit from GNUTLS-3.5.13.
2017-06-10gnu: Rename (gnu packages markdown) to (gnu packages markup).ng0
* gnu/packages/markdown.scm: Rename this ... * gnu/packages/markup.scm: ... to this. * gnu-system.am (GNU_SYSTEM_MODULES): Change markdown.scm to markup.scm. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-06-09gnu: raptor2: Fix heap overflow bug.Marius Bakke
* gnu/packages/patches/raptor2-heap-overflow.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/rdf.scm (raptor2): Use it.
2017-06-08gnu: artanis: Update to 0.2.1.Ludovic Courtès
* gnu/packages/guile.scm (artanis): Update to 0.2.1. [inputs]: Switch to GUILE-2.2. [arguments]: Adjust #:make-flags for Guile 2.2. Take .go files from lib/guile/2.2. Add 'wrap-art' phase. * gnu/packages/patches/artanis-fix-Makefile.in.patch: Remove. * gnu/local.mk (dist_patch_DATA): Remove it.
2017-06-06gnu: perl: Fix CVE-2017-6512 in File::Path.Leo Famulari
* gnu/packages/perl.scm (perl)[replacement]: New field. (perl/fixed): New variable. * gnu/packages/patches/perl-file-path-CVE-2017-6512.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2017-06-05gnu: Add js-mathjax.Arun Isaac
* gnu/packages/javascript.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. * gnu/packages/javascript.scm (js-mathjax): New variable.
2017-06-05gnu: xf86-input-wacom: Update to 0.34.2.Marius Bakke
* gnu/packages/xdisorg.scm (xf86-input-wacom): Update to 0.34.2. [source]: Remove obsolete patch. * gnu/packages/patches/xf86-input-wacom-xorg-abi-25.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2017-06-05Merge branch 'staging'Marius Bakke
2017-06-04gnu: libssh: Update to 0.7.5.Ludovic Courtès
* gnu/packages/ssh.scm (libssh): Update to 0.7.5. [source](patches): New field.
2017-06-04gnu: Add openscenegraph.Manolis Ragkousis
* gnu/packages/graphics.scm (openscenegraph): New variable. * gnu/packages/patches/openscenegraph-ffmpeg3.patch: New file. * gnu-system.am (dist_patch_DATA): Add it.
2017-06-03gnu: qemu: Fix CVE-2017-{8112,8309,8379,8380}.Leo Famulari
* gnu/packages/patches/qemu-CVE-2017-8112.patch, gnu/packages/patches/qemu-CVE-2017-8309.patch, gnu/packages/patches/qemu-CVE-2017-8379.patch, gnu/packages/patches/qemu-CVE-2017-8380.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/qemu.scm (qemu)[source]: Use them.
2017-06-04gnu: libgit2: Fix Clar test framework.Sergei Trofimovich
This commit reverts 'patch' hack introduced in a48a1071a686b250bf8b7982ca0ce8dda1d93c61 and fixes bug in the Clar test framework. Patch is proposed to Clar upstream as <https://github.com/vmg/clar/pull/78>. * gnu/local.mk: Add libgit2-0.25.1-mtime-0.patch. * gnu/packages/patches/libgit2-0.25.1-mtime-0.patch: New file. * gnu/packages/version-control.scm (libgit2)[arguments]: Remove 'apply-patch' phase. [inputs]: Remove "patch". [source]: Add 'patches' field. Signed-off-by: Sergei Trofimovich <slyfox@inbox.ru> Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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