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2023-03-20gnu: Add r-annotationhubdata.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-annotationhubdata): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2023-03-20gnu: Add r-affylmgui.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-affylmgui): New variable.
2023-03-20gnu: Add r-affyplm.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-affyplm): New variable.
2023-03-20gnu: Add r-affyilm.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-affyilm): New variable.
2023-03-19gnu: r-mutoss: Update to 0.1-13.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-mutoss): Update to 0.1-13.
2023-03-19gnu: r-valr: Update to 0.6.7.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-valr): Update to 0.6.7.
2023-03-19gnu: r-numbat: Update to 1.2.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-numbat): Update to 1.2.2.
2023-03-15gnu: r-biocthis: Update to 1.8.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biocthis): Update to 1.8.3.
2023-03-15gnu: r-chromvar: Update to 1.20.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-chromvar): Update to 1.20.2.
2023-03-15gnu: r-fishpond: Update to 2.4.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-fishpond): Update to 2.4.1. [propagated-inputs]: Remove r-rcpp.
2023-03-15gnu: r-s4vectors: Update to 0.36.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.36.2.
2023-03-15gnu: r-biocviews: Update to 1.66.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.66.3.
2023-03-15gnu: r-bioccheck: Update to 1.34.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bioccheck): Update to 1.34.3.
2023-03-15gnu: r-variancepartition: Update to 1.28.7.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.28.7.
2023-03-15gnu: r-circrnaprofiler: Update to 1.12.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-circrnaprofiler): Update to 1.12.2.
2023-03-15gnu: r-cicero: Update to 1.16.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.16.2.
2023-03-15gnu: r-rsubread: Update to 2.12.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.12.3.
2023-03-15gnu: r-iclusterplus: Update to 1.34.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-iclusterplus): Update to 1.34.3.
2023-03-15gnu: r-rbowtie2: Update to 2.4.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-rbowtie2): Update to 2.4.2.
2023-03-15gnu: r-motifbreakr: Update to 2.12.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-motifbreakr): Update to 2.12.3.
2023-03-15gnu: r-clusterexperiment: Update to 2.18.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-clusterexperiment): Update to 2.18.2.
2023-03-15gnu: r-clusterprofiler: Update to 4.6.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.6.2.
2023-03-15gnu: r-sigpathway: Update to 1.66.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-sigpathway): Update to 1.66.2.
2023-03-15gnu: r-linnorm: Update to 2.22.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-linnorm): Update to 2.22.2.
2023-03-15gnu: r-glmgampoi: Update to 1.10.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-glmgampoi): Update to 1.10.2.
2023-03-15gnu: r-diffbind: Update to 3.8.4.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.8.4.
2023-03-15gnu: r-scmap: Update to 1.20.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-scmap): Update to 1.20.2.
2023-03-15gnu: r-mutationalpatterns: Update to 3.8.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-mutationalpatterns): Update to 3.8.1.
2023-03-15gnu: r-muscat: Update to 1.12.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-muscat): Update to 1.12.1.
2023-03-15gnu: r-limma: Update to 3.54.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-limma): Update to 3.54.2.
2023-03-15gnu: r-lfa: Update to 1.28.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-lfa): Update to 1.28.2.
2023-03-15gnu: r-genomicalignments: Update to 1.34.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-genomicalignments): Update to 1.34.1.
2023-03-15gnu: r-annotationdbi: Update to 1.60.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-annotationdbi): Update to 1.60.2.
2023-03-15gnu: r-infercnv: Update to 1.14.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-infercnv): Update to 1.14.2.
2023-03-15gnu: r-bandits: Update to 1.14.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bandits): Update to 1.14.2.
2023-03-15gnu: r-bambu: Update to 3.0.8.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bambu): Update to 3.0.8.
2023-03-15gnu: r-atena: Update to 1.4.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-atena): Update to 1.4.1. [propagated-inputs]: Add r-matrixstats.
2023-03-15gnu: r-alpsnmr: Update to 4.0.4.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-alpsnmr): Update to 4.0.4. [propagated-inputs]: Add r-cli.
2023-03-15gnu: r-biocpkgtools: Update to 1.16.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.16.1. [source]: Add snippet to remove bundled minified JavaScript files. [native-inputs]: Add esbuild, js-bootstrap, js-d3, js-jquery, and js-underscore. [arguments]: Add build phase 'process-javascript.
2023-03-15gnu: r-mast: Update to 1.24.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-mast): Update to 1.24.1. [source]: Delete minified JavaScript. [arguments]: Add build phase 'process-javascript. [native-inputs]: Add esbuild and js-jquery-sticky-kit.
2023-03-10gnu: Add r-hdcytodata.Navid Afkhami
* gnu/packages/bioconductor.scm (r-hdcytodata): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2023-03-03gnu: Add r-oscope.Navid Afkhami
* gnu/packages/bioconductor.scm (r-oscope): New variable.
2023-03-02gnu: Add r-mmuphin.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-mmuphin): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2023-03-02gnu: Add r-maaslin2.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-maaslin2): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2023-03-02gnu: Add r-metagenomeseq.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-metagenomeseq): New variable.
2023-03-01gnu: Add r-conos.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-conos): New variable.
2023-02-27gnu: Add r-msa.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-msa): New variable.
2023-02-24gnu: r-tximeta: Update to 1.16.1.Simon Tournier
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.16.1.
2023-02-24gnu: r-gviz: Update to 1.42.1.Simon Tournier
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.42.1.
2023-02-24gnu: r-scran: Update to 1.26.2.Simon Tournier
* gnu/packages/bioconductor.scm (r-scran): Update to 1.26.2.
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