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path: root/gnu/packages/bioinformatics.scm
AgeCommit message (Expand)Author
2021-02-03Merge branch 'master' into core-updatesChristopher Baines
2021-02-01gnu: vcflib: Fix generated pkg-config file.Efraim Flashner
2021-02-01gnu: Adjust package collection to Wrap using GUIX_PYTHONPATH.Maxim Cournoyer
2021-02-01gnu: python-loompy: Do not set PYTHONPATH.Maxim Cournoyer
2021-02-01gnu: python-scanpy: Do not set PYTHONPATH.Maxim Cournoyer
2021-02-01gnu: python-screed: Adjust following Python build system changes.Maxim Cournoyer
2021-02-01gnu: bamm: Update following changes to the Python build system.Maxim Cournoyer
2021-02-01gnu: python-pysam: Adjust following Python build system changes.Maxim Cournoyer
2021-02-01gnu: python-pybedtools: Streamline following Python build system changes.Maxim Cournoyer
2021-01-29gnu: Replace all uses of texlive-union by texlive-updmap.cfg.Maxim Cournoyer
2021-01-29gnu: grocsvs: Remove package.Maxim Cournoyer
2021-01-28gnu: Add r-demultiplex.Ricardo Wurmus
2021-01-28gnu: Add repeat-masker.Ricardo Wurmus
2021-01-28gnu: Add trf.Ricardo Wurmus
2021-01-19gnu: freebayes: Update source, home-page URIs.Efraim Flashner
2021-01-19gnu: freebayes: Don't include vcflib sources.Efraim Flashner
2021-01-19gnu: vcflib: Add pkg-config file.Efraim Flashner
2021-01-19gnu: vcflib: Build a shared library.Efraim Flashner
2021-01-19gnu: freebayes: Extend test timeout on slower architectures.Efraim Flashner
2021-01-18gnu: Add r-snapatac.Mădălin Ionel Patrașcu
2021-01-18gnu: mafft: Update to 7.475.Mădălin Ionel Patrașcu
2021-01-18gnu: ruby-bio-vcf: Rename to bio-vcf.Efraim Flashner
2021-01-18gnu: Add ruby-bio-vcf.Efraim Flashner
2021-01-17gnu: freebayes: Update to 1.3.3.Efraim Flashner
2021-01-17gnu: multichoose: Install header files.Efraim Flashner
2021-01-17gnu: filevercmp: Install header files.Efraim Flashner
2021-01-14gnu: vcflib: Update to 1.0.2.Efraim Flashner
2021-01-14gnu: sambamba Update to 0.8.0.Efraim Flashner
2021-01-14gnu: gemma: Enable tests.Efraim Flashner
2021-01-14gnu: gemma: Add Texinfo markup.Efraim Flashner
2021-01-14gnu: gemma: Update to 0.98.3.Efraim Flashner
2021-01-13Merge branch 'staging' into 'core-updates'.Maxim Cournoyer
2020-12-29gnu: r-ggbio: Move to (gnu packages bioconductor).zimoun
2020-12-29gnu: r-gqtlstats: Move to (gnu packages bioconductor).zimoun
2020-12-29gnu: r-snpstats: Move to (gnu packages bioconductor).zimoun
2020-12-29gnu: r-homo-sapiens: Move to (gnu packages bioconductor).zimoun
2020-12-29gnu: r-erma: Move to (gnu packages bioconductor).zimoun
2020-12-29gnu: r-ldblock: Move to (gnu packages bioconductor).zimoun
2020-12-29gnu: r-gqtlstats: Move to (gnu packages bioconductor).zimoun
2020-12-29gnu: r-gviz: Move to (gnu packages bioconductor).zimoun
2020-12-29gnu: r-gwascat: Move to (gnu packages bioconductor).zimoun
2020-12-29gnu: r-sushi: Move to (gnu packages bioconductor).zimoun
2020-12-23gnu: discrover: Use new texlive package names.Ricardo Wurmus
2020-12-23gnu: discrover: Remove obsolete build phase.Ricardo Wurmus
2020-12-20gnu: kentutils: Build with OpenSSL 1.1.Marius Bakke
2020-12-20gnu: kentutils: Add a file name for the "samtabix" input.Marius Bakke
2020-12-09gnu: r-keggrest: Update to 1.30.1.Ricardo Wurmus
2020-12-09gnu: r-genomeinfodb: Update to 1.26.2.Ricardo Wurmus
2020-12-09gnu: r-biocstyle: Update to 2.18.1.Ricardo Wurmus
2020-12-09gnu: r-rhtslib: Propagate zlib.Ricardo Wurmus
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