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2020-02-14Merge branch 'master' into core-updatesMarius Bakke
2020-02-13gnu: r-bayesplot: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-bayesplot)[home-page]: Use HTTPS.
2020-02-11gnu: r-abn: Fix home page.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-abn)[home-page]: Update and use HTTPS.
2020-02-11gnu: r-rglpk: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-rglpk)[home-page]: Use HTTPS.
2020-02-11gnu: r-smoother: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-smoother)[home-page]: Use HTTPS.
2020-02-11gnu: r-jsonlite: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-jsonlite)[home-page]: Use HTTPS.
2020-02-11gnu: r-glasso: Update home page and use HTTPS.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-glasso)[home-page]: Follow redirection using HTTPS.
2020-02-11gnu: r-png: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-png)[home-page]: Use HTTPS.
2020-02-11gnu: r-squarem: Update home page and use HTTPS.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-squarem)[home-page]: Follow redirection using HTTPS.
2020-02-11gnu: r-seriation: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-seriation)[home-page]: Use HTTPS.
2020-02-03Merge branch 'staging' into core-updatesMarius Bakke
2020-01-27gnu: r-shinycssloaders: Update to 0.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-shinycssloaders): Update to 0.3.
2020-01-27gnu: r-idpmisc: Update to 1.1.20.Ricardo Wurmus
* gnu/packages/cran.scm (r-idpmisc): Update to 1.1.20.
2020-01-27gnu: r-rngwell: Update to 0.10-6.Ricardo Wurmus
* gnu/packages/cran.scm (r-rngwell): Update to 0.10-6.
2020-01-27gnu: r-bio3d: Update to 2.4-1.Ricardo Wurmus
* gnu/packages/cran.scm (r-bio3d): Update to 2.4-1.
2020-01-27gnu: r-parameters: Update to 0.4.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-parameters): Update to 0.4.1.
2020-01-27gnu: r-leiden: Update to 0.3.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-leiden): Update to 0.3.2.
2020-01-27gnu: r-rhpcblasctl: Update to 0.20-17.Ricardo Wurmus
* gnu/packages/cran.scm (r-rhpcblasctl): Update to 0.20-17.
2020-01-27gnu: r-threejs: Update to 0.3.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-threejs): Update to 0.3.3. [native-inputs]: Use jquery 1.12.4 and threejs version r111. [arguments]: Adjust.
2020-01-27gnu: r-farver: Update to 2.0.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-farver): Update to 2.0.3.
2020-01-27gnu: r-adegenet: Update to 2.1.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-adegenet): Update to 2.1.2.
2020-01-27gnu: r-cobs: Update to 1.3-4.Ricardo Wurmus
* gnu/packages/cran.scm (r-cobs): Update to 1.3-4.
2020-01-27gnu: r-dorng: Update to 1.8.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-dorng): Update to 1.8.2. [propagated-inputs]: Remove r-pkgmaker.
2020-01-27gnu: r-future: Update to 1.16.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-future): Update to 1.16.0.
2020-01-27gnu: r-rmpfr: Update to 0.8-1.Ricardo Wurmus
* gnu/packages/cran.scm (r-rmpfr): Update to 0.8-1. [inputs]: Add gmp. [native-inputs]: Add pkg-config.
2020-01-27gnu: r-gmp: Update to 0.5-13.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-gmp): Update to 0.5-13.6.
2020-01-27gnu: r-afex: Update to 0.26-0.Ricardo Wurmus
* gnu/packages/cran.scm (r-afex): Update to 0.26-0.
2020-01-27gnu: r-gh: Update to 1.1.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-gh): Update to 1.1.0. [propagated-inputs]: Add r-cli.
2020-01-27gnu: r-sjplot: Update to 2.8.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-sjplot): Update to 2.8.2. [propagated-inputs]: Remove r-ggrepel, r-glmmtmb, r-lme4, r-magrittr, r-modelr, and r-psych.
2020-01-27gnu: r-effectsize: Update to 0.1.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-effectsize): Update to 0.1.1.
2020-01-27gnu: r-performance: Update to 0.4.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-performance): Update to 0.4.3.
2020-01-27gnu: r-bayestestr: Update to 0.5.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-bayestestr): Update to 0.5.1.
2020-01-27gnu: r-sjstats: Update to 0.17.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-sjstats): Update to 0.17.8. [propagated-inputs]: Add r-effectsize.
2020-01-27gnu: r-survey: Update to 3.37.Ricardo Wurmus
* gnu/packages/cran.scm (r-survey): Update to 3.37.
2020-01-27gnu: r-magick: Update to 2.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-magick): Update to 2.3.
2020-01-27gnu: r-sjlabelled: Update to 1.1.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-sjlabelled): Update to 1.1.2. [propagated-inputs]: Remove r-magrittr, r-purrr, r-rlang, and r-tidyselect.
2020-01-27gnu: r-factominer: Update to 2.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-factominer): Update to 2.1.
2020-01-27gnu: r-leaps: Update to 3.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-leaps): Update to 3.1.
2020-01-27gnu: r-vctrs: Update to 0.2.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-vctrs): Update to 0.2.2. [propagated-inputs]: Remove r-backports and r-zeallot.
2020-01-27gnu: r-tsp: Update to 1.1-8.Ricardo Wurmus
* gnu/packages/cran.scm (r-tsp): Update to 1.1-8.
2020-01-27gnu: r-xts: Update to 0.12-0.Ricardo Wurmus
* gnu/packages/cran.scm (r-xts): Update to 0.12-0.
2020-01-27gnu: r-broom: Update to 0.5.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-broom): Update to 0.5.4.
2020-01-27gnu: r-lpsolve: Update to 5.6.15.Ricardo Wurmus
* gnu/packages/cran.scm (r-lpsolve): Update to 5.6.15.
2020-01-27gnu: r-prettyunits: Update to 1.1.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-prettyunits): Update to 1.1.1.
2020-01-27gnu: r-rgooglemaps: Update to 1.4.5.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-rgooglemaps): Update to 1.4.5.2.
2020-01-27gnu: r-callr: Update to 3.4.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-callr): Update to 3.4.1.
2020-01-22gnu: Replace uses of 'libjpeg' with 'libjpeg-turbo'.Marius Bakke
* gnu/packages/abiword.scm (abiword)[inputs]: Change from LIBJPEG to LIBJPEG-TURBO. * gnu/packages/admin.scm (testdisk)[inputs]: Likewise. * gnu/packages/algebra.scm (giac)[inputs]: Likewise. * gnu/packages/animation.scm (synfig)[inputs]: Likewise. * gnu/packages/astronomy.scm (gnuastro, celestia)[inputs]: Likewise. * gnu/packages/cdrom.scm (dvdstyler)[inputs]: Likewise. * gnu/packages/cran.scm (r-jpeg, r-tiff, r-readbitmap)[inputs]: Likewise. * gnu/packages/cups.scm (cups-filters, hplip)[inputs]: Likewise. * gnu/packages/display-managers.scm (slim)[inputs]: Likewise. * gnu/packages/ebook.scm (fbreader)[inputs]: Likewise. * gnu/packages/emacs.scm (emacs)[inputs]: Likewise. * gnu/packages/enlightenment.scm (efl)[propagated-inputs]: Likewise. * gnu/packages/fltk.scm (fltk, ntk)[inputs]: Likewise. * gnu/packages/fontutils.scm (fontforge)[inputs]: Likewise. * gnu/packages/freedesktop.scm (weston)[inputs]: Likewise. * gnu/packages/game-development.scm (sfml, allegro, aseprite, python-pygame, eureka, ioquake3)[inputs]: Likewise. * gnu/packages/games.scm (adanaxisgpl, freedroidrpg, irrlicht, minetest, fizmo, supertuxkart, gzdoom, xmoto, xonotic)[inputs]: Likewise. * gnu/packages/gd.scm (gd, perl-gd)[inputs]: Likewise. * gnu/packages/ghostscript.scm (lcms)[inputs]: Likewise. (ghostscript)[inputs, native-inputs]: Likewise. * gnu/packages/gimp.scm (gegl, gimp)[inputs]: Likewise. * gnu/packages/gnome.scm (libgnomeui, eog, tracker-miners, gthumb)[inputs]: Likewise. * gnu/packages/gnunet.scm (libextractor)[inputs]: Likewise. * gnu/packages/gnustep.scm (windowmaker)[inputs]: Likewise. * gnu/packages/graphics.scm (blender, blender-2.79, openimageio, openscenegraph, openscenegraph-3.4, povray, fgallery)[inputs]: Likewise. * gnu/packages/graphviz.scm (graphviz)[inputs]: Likewise. * gnu/packages/gstreamer.scm (gst-plugins-good)[inputs]: Likewise. * gnu/packages/gtk.scm (gdk-pixbuf)[inputs]: Likewise. * gnu/packages/image-processing.scm (dcmtk, mia, vtk, opencv, vips, nip2, vxl, insight-toolkit)[inputs]: Likewise. * gnu/packages/image-viewers.scm (gpicview, luminance-hdr)[inputs]: Likewise. * gnu/packages/image.scm (jpegoptim, libtiff, leptonica, imlib2, freeimage, vigra, libwebp, libmng, jasper, steghide, jp2a)[inputs]: Likewise. * gnu/packages/imagemagick.scm (imagemagick, graphicsmagick)[inputs]: Likewise. * gnu/packages/java.scm (icedtea-6, icedtea-7, openjdk9, openjdk11, openjdk12)[inputs]: Likewise. * gnu/packages/kde-frameworks.scm (khtml)[inputs]: Likewise. * gnu/packages/kodi.scm (kodi)[inputs]: Likewise. * gnu/packages/machine-learning.scm (dlib, tensorflow)[inputs]: Likewise. * gnu/packages/mate.scm (atril, eom)[inputs]: Likewise. * gnu/packages/maths.scm (hdf4, hdf-java, hdf-eos2, netcdf)[inputs]: Likewise. * gnu/packages/netpbm.scm (netpbm)[inputs]: Likewise. * gnu/packages/pdf.scm (zathura-pdf-mupdf, podofo, mupdf, fbida)[inputs]: Likewise. * gnu/packages/photo.scm (libraw, libpano13, enblend-enfuse, darktable, hugin, rawtherapee)[inputs]: Likewise. * gnu/packages/prolog.scm (swi-prolog)[native-inputs]: Likewise. * gnu/packages/python-xyz.scm (python-hdf4, python-pillow)[inputs]: Likewise. * gnu/packages/qt.scm (qtbase, qtwebkit)[inputs]: Likewise. * gnu/packages/rdesktop.scm (freerdp)[inputs]: Likewise. * gnu/packages/scanner.scm (sane-backends, xsane)[inputs]: Likewise. * gnu/packages/scheme.scm (racket)[inputs]: Likewise. * gnu/packages/scribus.scm (scribus)[inputs]: Likewise. * gnu/packages/sdl.scm (sdl-image)[propagated-inputs]: Likewise. (guile-sdl)[native-inputs]: Likewise. * gnu/packages/spice.scm (spice-gtk)[inputs]: Likewise. * gnu/packages/statistics.scm (r-with-tests)[inputs]: Likewise. * gnu/packages/tcl.scm (perl-tk)[inputs]: Likewise. * gnu/packages/upnp.scm (readymedia)[inputs]: Likewise. * gnu/packages/video.scm (mplayer, mpv, v4l-utils, motion)[inputs]: Likewise. * gnu/packages/web-browsers.scm (dillo, links)[inputs]: Likewise. * gnu/packages/web.scm (netsurf)[inputs]: Likewise. * gnu/packages/webkit.scm (webkitgtk)[inputs]: Likewise. * gnu/packages/wine.scm (wine)[inputs]: Likewise. * gnu/packages/wv.scm (wv)[inputs]: Likewise. * gnu/packages/wxwidgets.scm (wxwidgets, wxwidgets-2)[inputs]: Likewise. * gnu/packages/xdisorg.scm (xscreensaver)[inputs]: Likewise. * gnu/packages/xfce.scm (tumbler)[inputs]: Likewise. * gnu/packages/xfig.scm (xfig, transfig)[inputs]: Likewise. * gnu/packages/xorg.scm (xpra)[inputs]: Likewise.
2020-01-20gnu: r-dummies: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-dummies)[home-page]: Use HTTPS.
2020-01-19gnu: Use HTTPS for all r-lib.org subdomains.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-ps, r-fs)[home-page]: Use HTTPS.
2020-01-17gnu: r-extremes: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-extremes)[home-page]: Use HTTPS.
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