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2022-09-10gnu: Add comments to the bottom of a few package modules.Christopher Baines
This will hopefully discourage patches which add new packages to the bottom of files, as this increases the likelihood of conflicts when applying patches. If there are more specific ways that packages should be arranged in specific modules, this message can be updated accordingly. * gnu/packages/bioconductor.scm: Add comment discouraging adding packages to the bottom of the file. * gnu/packages/bioinformatics.scm: ditto. * gnu/packages/cran.scm: ditto. * gnu/packages/crates-io.scm: ditto. * gnu/packages/emacs-xyz.scm: ditto. * gnu/packages/golang.scm: ditto. * gnu/packages/guile-xyz.scm: ditto. * gnu/packages/haskell-xyz.scm: ditto. * gnu/packages/java.scm: ditto. * gnu/packages/julia-xyz.scm: ditto. * gnu/packages/lisp-xyz.scm: ditto. * gnu/packages/ocaml.scm: ditto. * gnu/packages/perl.scm: ditto. * gnu/packages/python-science.scm: ditto. * gnu/packages/python-xyz.scm: ditto. * gnu/packages/ruby.scm: ditto. * gnu/packages/tex.scm: ditto.
2022-09-10gnu: Add r-ggalt.zimoun
* gnu/packages/cran.scm (r-ggalt): New variable.
2022-09-10gnu: Add r-proj4.zimoun
* gnu/packages/cran.scm (r-proj4): New variable.
2022-08-25gnu: Add r-aer.Ricardo Wurmus
* gnu/packages/cran.scm (r-aer): New variable.
2022-08-25gnu: Add r-ips.Ricardo Wurmus
* gnu/packages/cran.scm (r-ips): New variable.
2022-08-25gnu: Add r-glmpca.Ricardo Wurmus
* gnu/packages/cran.scm (r-glmpca): New variable.
2022-08-23gnu: Add r-ggvenndiagram.Mădălin Ionel Patrașcu
* gnu/packages/cran.scm (r-ggvenndiagram): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-08-23gnu: Add r-rvenn.Mădălin Ionel Patrașcu
* gnu/packages/cran.scm (r-rvenn): New variable.
2022-08-22gnu: Add r-polylabelr.Mădălin Ionel Patrașcu
* gnu/packages/cran.scm (r-polylabelr): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-08-22gnu: Add r-gensa.Mădălin Ionel Patrașcu
* gnu/packages/cran.scm (r-gensa): New variable.
2022-08-22gnu: Add r-ggvenn.Mădălin Ionel Patrașcu
* gnu/packages/cran.scm (r-ggvenn): New variable.
2022-08-15gnu: r-tweenr: Build reproducibly.Ricardo Wurmus
* gnu/packages/cran.scm (r-tweenr)[arguments]: Add phase 'build-reproducibly to avoid embedding random time difference.
2022-08-14gnu: r-rcppparallel: Do not use bundled tbb.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcppparallel)[inputs]: Add tbb-2020. [arguments]: Add build phase 'use-system-tbb to set TBB_ROOT. [source]: Add snippet to remove bundled tbb.
2022-08-14gnu: r-reticulate: Build reproducibly.Ricardo Wurmus
* gnu/packages/cran.scm (r-reticulate)[arguments]: Add build phase 'build-reproducibly to ensure that pyc files are built reproducibly.
2022-08-11gnu: Add r-qmri.Ricardo Wurmus
* gnu/packages/cran.scm (r-qmri): New variable.
2022-08-11gnu: Add r-mritc.Ricardo Wurmus
* gnu/packages/cran.scm (r-mritc): New variable.
2022-08-11gnu: Add r-oro-nifti.Ricardo Wurmus
* gnu/packages/cran.scm (r-oro-nifti): New variable.
2022-08-11gnu: Add r-adimpro.Ricardo Wurmus
* gnu/packages/cran.scm (r-adimpro): New variable.
2022-08-11gnu: Add r-fmri.Ricardo Wurmus
* gnu/packages/cran.scm (r-fmri): New variable.
2022-08-10gnu: r-paws-common: Update to 0.4.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-paws-common): Update to 0.4.0. [propagated-inputs]: Add r-curl.
2022-08-10gnu: r-dismo: Update to 1.3-8.Ricardo Wurmus
* gnu/packages/cran.scm (r-dismo): Update to 1.3-8.
2022-08-10gnu: r-rapiserialize: Update to 0.1.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-rapiserialize): Update to 0.1.1.
2022-08-10gnu: r-textplot: Update to 0.2.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-textplot): Update to 0.2.2.
2022-08-10gnu: r-stars: Update to 0.5-6.Ricardo Wurmus
* gnu/packages/cran.scm (r-stars): Update to 0.5-6.
2022-08-10gnu: r-pdftools: Update to 3.3.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-pdftools): Update to 3.3.0.
2022-08-10gnu: r-pkgdown: Update to 2.0.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-pkgdown): Update to 2.0.6. [propagated-inputs]: Remove r-crayon; add r-cli.
2022-08-10gnu: r-downlit: Update to 0.4.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-downlit): Update to 0.4.2.
2022-08-10gnu: r-mlr3: Update to 0.13.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-mlr3): Update to 0.13.4.
2022-08-10gnu: r-paradox: Update to 0.10.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-paradox): Update to 0.10.0.
2022-08-10gnu: r-mlr3measures: Update to 0.5.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-mlr3measures): Update to 0.5.0.
2022-08-10gnu: r-qtl: Update to 1.52.Ricardo Wurmus
* gnu/packages/cran.scm (r-qtl): Update to 1.52.
2022-08-10gnu: r-tidymodels: Update to 1.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-tidymodels): Update to 1.0.0.
2022-08-10gnu: r-modeldata: Update to 1.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-modeldata): Update to 1.0.0. [propagated-inputs]: Add r-dplyr, r-mass, r-purrr, r-rlang, and r-tibble.
2022-08-10gnu: r-workflowsets: Update to 1.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-workflowsets): Update to 1.0.0. [propagated-inputs]: Add r-glue, r-parsnip, and r-pillar.
2022-08-10gnu: r-tune: Update to 1.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-tune): Update to 1.0.0. [propagated-inputs]: Add r-tidyselect.
2022-08-10gnu: r-rsample: Update to 1.1.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-rsample): Update to 1.1.0.
2022-08-10gnu: r-workflows: Update to 1.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-workflows): Update to 1.0.0.
2022-08-10gnu: r-igraph: Update to 1.3.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-igraph): Update to 1.3.4. [propagated-inputs]: Add r-rlang.
2022-08-10gnu: r-rsconnect: Update to 0.8.27.Ricardo Wurmus
* gnu/packages/cran.scm (r-rsconnect): Update to 0.8.27.
2022-08-10gnu: r-bdgraph: Update to 2.68.Ricardo Wurmus
* gnu/packages/cran.scm (r-bdgraph): Update to 2.68.
2022-08-10gnu: r-rockchalk: Update to 1.8.157.Ricardo Wurmus
* gnu/packages/cran.scm (r-rockchalk): Update to 1.8.157.
2022-08-10gnu: r-matrixextra: Update to 0.1.11.Ricardo Wurmus
* gnu/packages/cran.scm (r-matrixextra): Update to 0.1.11.
2022-08-10gnu: r-quanteda: Update to 3.2.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-quanteda): Update to 3.2.2.
2022-08-10gnu: r-proxyc: Update to 0.3.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-proxyc): Update to 0.3.0.
2022-08-10gnu: r-forecast: Update to 8.17.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-forecast): Update to 8.17.0. [propagated-inputs]: Add r-generics.
2022-08-10gnu: r-emplik: Update to 1.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-emplik): Update to 1.2.
2022-08-10gnu: r-actuar: Update to 3.3-0.Ricardo Wurmus
* gnu/packages/cran.scm (r-actuar): Update to 3.3-0.
2022-08-10gnu: r-fda: Update to 6.0.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-fda): Update to 6.0.5.
2022-08-10gnu: r-r-filesets: Update to 2.15.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-r-filesets): Update to 2.15.0.
2022-08-10gnu: r-accept: Update to 0.9.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-accept): Update to 0.9.1.
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