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2018-12-18gnu: sqlite: Replace with 3.26.0 [security fixes].Alex Vong
Fixes <https://bugs.gnu.org/33751>. Reported by Marius Bakke <mbakke@fastmail.com>. * gnu/packages/databases.scm (sqlite-3.26.0): New public variable. (sqlite)[replacement]: Use it. (sqlite-with-fts5): Use 'package/inherit'. (sqlite-with-column-metadata): Likewise. Modified-by: Mark H Weaver <mhw@netris.org>
2018-12-04gnu: mongo-tools: Fix build.Christopher Baines
I guess this broke when upgrading go. I did try upgrading to the later patch and minor releases, but they had similar problems, so lets upgrade separately. * gnu/packages/databases.scm (mongo-tools)[arguments]: Add patch-source phase.
2018-11-29Merge branch 'master' into core-updatesMarius Bakke
2018-11-24gnu: sqlcipher: Update to 3.4.2.Brett Gilio
* gnu/packages/databases.scm (sqlcipher): Update to 3.4.2. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-24gnu: mariadb: Update to 10.1.37 [security fixes].Marius Bakke
This release fixes CVE-2018-3282, CVE-2018-3174, CVE-2018-3143, CVE-2018-3156, and CVE-2018-3251. See <https://mariadb.com/kb/en/library/mariadb-10137-release-notes/> for details. * gnu/packages/databases.scm (mariadb): Update to 10.1.37.
2018-11-14gnu: databases: Return #t from all phases.Mark H Weaver
* gnu/packages/databases.scm (4store, go-gopkg.in-mgo.v2, mongodb) (sparql-query, tdb, sqlcipher, python-sqlparse, mongo-tools): Return #t from all phases, use invoke where appropriate, and remove vestigial plumbing.
2018-11-14Merge branch 'master' into core-updatesMarius Bakke
2018-11-11gnu: PostgreSQL: Update to 10.6 [fixes CVE-2018-16850].Leo Famulari
* gnu/packages/databases.scm (postgresql): Update to 10.6.
2018-11-11gnu: python-rq: Update to 0.12.0.Efraim Flashner
* gnu/packages/databases.scm (python-rq): Update to 0.12.0.
2018-11-11gnu: python-alembic: Update to 1.0.2.Efraim Flashner
* gnu/packages/databases.scm (python-alembic, python2-alembic): Update to 1.0.2.
2018-11-11gnu: mdbtools: Fetch sources from git.Ricardo Wurmus
* gnu/packages/databases.scm (mdbtools)[source]: Fetch from git.
2018-11-11gnu: mdbtools: Remove custom bootstrap phase.Ricardo Wurmus
* gnu/packages/databases.scm (mdbtools)[arguments]: Remove.
2018-11-09Merge branch 'master' into core-updatesMarius Bakke
2018-11-08gnu: PostgreSQL 9: Update to 9.6.11 [fixes CVE-2018-16850].Leo Famulari
* gnu/packages/databases.scm (postgresql-9.6): Update to 9.6.11.
2018-11-07gnu: rocksdb: Update to 5.15.10.Marius Bakke
* gnu/packages/databases.scm (rocksdb): Update to 5.15.10.
2018-11-07gnu: rocksdb: Don't use unstable tarball.Marius Bakke
* gnu/packages/databases.scm (rocksdb)[source]: Use GIT-FETCH.
2018-11-05Merge branch 'master' into core-updatesMarius Bakke
2018-10-28gnu: qt: Use system sqlite.Efraim Flashner
* gnu/packages/databases.scm (sqlite-with-column-metadata): New variable. * gnu/packages/qt.scm (qt, qtbase)[source]: Remove bundled sqlite. [inputs]: Add sqlite-with-column-metadata. [arguments]: Add configure-flag to use system sqlite.
2018-10-24gnu: mongodb: Use INVOKE.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (mongodb)[arguments]: Substitute INVOKE for SYSTEM*.
2018-10-21Merge branch 'master' into core-updatesMarius Bakke
2018-10-19gnu: guile-wiredtiger: Update to 0.7.0.Amirouche
* gnu/packages/databases.scm (guile-wiredtiger): Update to 0.7.0. [inputs]: Replace wiredtiger with wiredtiger-3 [propagated-inputs]: Remove guile-lib, add guile-bytestructures [description]: Update it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-10-19gnu: Add wiredtiger 3.1.0Amirouche
* gnu/packages/databases.scm (wiredtiger-3): New variable that inherits from wiredtiger Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-10-17Merge branch 'master' into core-updatesMarius Bakke
2018-10-10gnu: python-pickleshare: Update to 0.7.5.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (python-pickleshare): Update to 0.7.5.
2018-10-05Merge branch 'master' into core-updatesMarius Bakke
2018-10-03gnu: recutils: Adjust Gnulib to libc 2.28.Ludovic Courtès
Fixes <https://bugs.gnu.org/32776>. * gnu/packages/databases.scm (recutils)[modules, snippet]: New fields.
2018-09-28gnu: python-fakeredis: Edit description.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (python-fakeredis)[description]: Fix (upstream) typo. Get carried away.
2018-09-26Merge branch 'master' into core-updatesMarius Bakke
2018-09-21gnu: perl-dbd-mysql: Update to 4.048.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.048.
2018-09-13Merge branch 'master' into core-updatesLeo Famulari
2018-09-11gnu: perl-dbd-mysql: Update to 4.047.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.047. [arguments]: Add 'skip-library-detection' phase.
2018-09-09gnu: mariadb: Move unbundle substitutions to source snippet.Marius Bakke
* gnu/packages/databases.scm (mariadb)[source](snippet): Add two substitutions from ... [arguments]: The 'unbundle' phase here. Rename to 'fix-pcre-detection.
2018-09-09gnu: mariadb: Update to 10.1.36.Marius Bakke
* gnu/packages/databases.scm (mariadb): Update to 10.1.36. [arguments]: Disable one new test.
2018-08-25Merge branch 'staging' into core-updatesMarius Bakke
2018-08-25Merge branch 'master' into stagingMarius Bakke
2018-08-24gnu: boost: Move 1.59.0 definition to boost.scm.Ludovic Courtès
Fixes a regression introduced in commit 7cbf06d8c2935abfc6c688cf3f9b99e0e5393960 where the top-level code of these two modules would depend on each other, leading to "boost: unbound variable" kind of errors in some circumstances. * gnu/packages/databases.scm (boost-for-mysql): Move to... * gnu/packages/boost.scm (boost-for-mysql): ... here. Make public and add 'properties' field.
2018-08-22gnu: perl-dbd-mysql: Update to 4.046.Leo Famulari
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.046. [source]: Update URL. Remove 'perl-dbd-mysql-CVE-2017-10788.patch'. * gnu/packages/patches/perl-dbd-mysql-CVE-2017-10788.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2018-08-22Merge branch 'master' into stagingMarius Bakke
2018-08-22gnu: Remove GCC ICE workarounds.Marius Bakke
* gnu/packages/patches/doxygen-gcc-ice.patch, gnu/packages/patches/mariadb-gcc-ice.patch, gnu/packages/patches/perf-gcc-ice.patch: Delete files * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/databases.scm (mariadb)[source](patches): Likewise. * gnu/packages/linux.scm (perf)[source](patches): Likewise. * gnu/packages/documentation.scm (doxygen)[inputs, arguments]: Likewise.
2018-08-22gnu: mariadb: Remove huge mysql_embedded executable.Marius Bakke
* gnu/packages/databases.scm (mariadb)[arguments]: Adjust deletion regex.
2018-08-22gnu: mariadb: Propagate OpenSSL.Marius Bakke
* gnu/packages/databases.scm (mariadb)[inputs]: Move OPENSSL ... [propagated-inputs]: ... here. (r-rmysql)[inputs]: Remove OPENSSL.
2018-08-22gnu: Add sqlcrush.Tobias Geerinckx-Rice
* gnu/packages/databases.smc (sqlcrush): New public variable.
2018-08-22gnu: Add python-pymysql.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (python-pymysql, python2-pymysql): New public variables.
2018-08-21gnu: gdbm: Update to 1.18.Marius Bakke
* gnu/packages/databases.scm (gdbm): Update to 1.18.
2018-08-21gnu: python-sqlalchemy: Update to 1.2.11.Marius Bakke
* gnu/packages/databases.scm (python-sqlalchemy): Update to 1.2.11.
2018-08-21gnu: python-sqlalchemy: Use 'invoke'.Marius Bakke
* gnu/packages/databases.scm (python-sqlalchemy)[arguments]: Use INVOKE instead of SYSTEM*.
2018-08-21gnu: unixodbc: Update to 2.3.7.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (unixodbc): Update to 2.3.7.
2018-08-20gnu: mysql: Update to 5.7.23.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (mysql): Update to 5.7.23.
2018-08-20gnu: mysql: Fix build.Tobias Geerinckx-Rice
MySQL demands boost@1.59.0, and lying about it no longer works: sql/item_geofunc_internal.cc: In function ‘void handle_gis_exception(const char*)’: sql/item_geofunc_internal.cc:37:81: error: expected unqualified-id before ‘&’ token catch (const boost::geometry::detail::self_get_turn_points::self_ip_exception &) ^ [...] * gnu/packages/databases.scm (boost-for-mysql): New variable. (mysql)[inputs]: Use that instead of the regular boost. [arguments]: Remove now-unnecessary ‘patch-boost-version’ phase.
2018-08-20gnu: python-pyodbc: Update to 4.0.24.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (python-pyodbc): Update to 4.0.24.
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