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This commit was obtained by running:
./pre-inst-env guix style
without any additional argument.
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* gnu/packages/java.scm (java-log4j-api)[properties]: Add cpe-name.
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Includes fixes for CVE-2017-5645, CVE-2020-9488 and CVE-2021-44228.
* gnu/packages/java.scm (java-log4j-api): Update to 2.15.0.
(java-log4j-core, java-log4j-1.2-api)[inputs]: Adjust accordingly.
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* gnu/packages/java.scm (java-lmax-disruptor): Update to 3.4.4.
[source]: Use git-fetch instead of url-fetch.
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* gnu/packages/java.scm (java-conversant-disruptor): New variable.
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* gnu/packages/java.scm (java-jctools-core-1): New variable.
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* gnu/packages/java.scm (java-jansi): Update to 2.4.0.
(java-jansi-1): New variable.
[source]: Use git-fetch instead of url-fetch.
(java-jline-2)[inputs]: Use java-jansi-1.
* gnu/packages/groovy.scm (java-groovy-bootstrap)[inputs]: Use java-jansi-1.
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This is a follow-up to commit 7e6ee16d498f48b7bb74fefe5d3d67c62b5baa9d.
* gnu/packages/java.scm (tla2tools)[arguments]: Remove remaining reference to
%output.
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* gnu/packages/java.scm (tla2tools)[arguments]: Bind OUTPUTS in build phase
'install to remove reference to %output.
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* gnu/packages/java.scm (java-log4j-core)[arguments]: Remove reference to
%outputs by using a gexp.
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* gnu/packages/java.scm (java-log4j-api)[arguments]: Remove reference to
%outputs by using a gexp.
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* gnu/packages/java.scm (java-native-access)[native-inputs]: Add gcc-7 to fix
the build.
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* gnu/packages/java.scm (java-commons-math3)[arguments]: Remove trailing #T
from build phase.
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* gnu/packages/java.scm (java-commons-math3)[arguments]: Use a gexp
to remove references to %build-inputs.
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* gnu/packages/java.scm (java-commons-collections4)[arguments]: Use a gexp
to remove references to %build-inputs.
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* gnu/packages/java.scm (java-commons-exec-1.1)[arguments]: Use a gexp
to remove references to %build-inputs.
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* gnu/packages/java.scm (java-commons-exec)[arguments]: Use a gexp to
remove references to %build-inputs.
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* gnu/packages/java.scm (openjdk16)[arguments]: Do not shell out to "chmod".
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* gnu/packages/java.scm (openjdk17): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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The new URL was found in the release announcement at
https://mail.openjdk.java.net/pipermail/jdk-updates-dev/2021-October/009368.html
* gnu/packages/java.scm (openjdk11): Update to 11.0.13.
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* gnu/packages/java.scm (java-cisd-args4j)[arguments]: Do not unpack
build-resources input; just copy the contents.
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* gnu/packages/java.scm (java-commons-io)[arguments]: Do not use
%build-inputs; use gexp with this-package-native-inputs instead.
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Reported by Andrew Patterson <andrewpatt7@gmail.com>.
* gnu/packages/java.scm (tla2tools)[version, source]: Use a commit (and
GIT-VERSION) instead of a tag.
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This is a follow-up of: 287a8c90484c76336e0c0457960e4b2ebf4d2b16.
* gnu/packages/java.scm (icedtea-7)[arguments]{install-keystore}: Use pem
certificates.
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* gnu/packages/java.scm (openjdk9, openjdk10, openjdk11)[arguments]: Add
'-fcommon', '-fno-delete-null-pointer-checks' and '-fno-lifetime-dse'
to CFLAGS.
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* gnu/packages/java.scm (openjdk10)[arguments]: Pass '-fcommon' to CFLAGS.
Add 'disable-warnings-as-errors' phase.
[native-inputs]: Add gcc-9.
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* gnu/packages/java.scm (openjdk9)[arguments]: Pass '-fcommon' to CFLAGS.
[native-inputs]: Add gcc-9.
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* gnu/packages/java.scm (javacc)[arguments]: Use gexp for 'make-flags'.
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* gnu/packages/java.scm (java-org-ow2-parent-pom-1.3)[arguments]: Use gexp in
'install' phase.
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* gnu/packages/java.scm (java-classpathx-servletapi)[arguments]: Use gexp for
'make-flags'.
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* gnu/packages/java.scm (ant/java8)[arguments]: Delete
'define-java-environment-variables' phase inherited from ant-bootstrap.
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* gnu/packages/java.scm (icedtea-8)[arguments]: Pass '-fcommon' to CFLAGS and
CXXFLAGS. Add 'fix-openjdk' phase.
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* gnu/packages/java.scm (icedtea-7)[arguments]: Add 'fix-openjdk' phase.
Update 'install-keystore' phase.
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* gnu/packages/java.scm (icedtea-6)[arguments]: Add 'fix-openjdk' phase.
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Fixes <https://issues.guix.gnu.org/49990>.
Previously, building 'ant-bootstrap' would fail in obscure ways.
* gnu/packages/patches/classpath-miscompilation.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/java.scm (classpath-bootstrap)[source]: Use it.
[arguments]: Remove 'remove-call-to-free' phase.
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* gnu/packages/java.scm (ant-bootstrap)[arguments]: Move 'setenv' calls
to new 'define-java-environment-variables' phase.
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* gnu/packages/java.scm (classpath-bootstrap)[arguments]: Use
'search-input-file'.
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* gnu/packages/java.scm (libantlr3c)[arguments]: Remove custom
'configure phase. Move '--enable-64bit' to configure-flags, conditional
on being for a 64-bit platform.
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* gnu/packages/java.scm (icedtea-6)[native-inputs]: Add 'file-name'
field to all the origins.
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Conflicts:
gnu/packages/bioinformatics.scm
gnu/packages/cmake.scm
gnu/packages/curl.scm
gnu/packages/emacs-xyz.scm
gnu/packages/gpodder.scm
gnu/packages/music.scm
gnu/packages/patches/glibc-bootstrap-system.patch
gnu/packages/python-xyz.scm
gnu/packages/shells.scm
gnu/packages/statistics.scm
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* gnu/packages/java.scm (java-commons-codec): Update to 1.15.
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* gnu/packages/java.scm (java-commons-codec)[arguments]: Add a new
'skip-ravenous-test phase.
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* gnu/packages/java.scm (java-commons-codec)[arguments]: Don't return #t
from phases.
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This changes some of the remaining uses of this idiom:
(string-append (assoc-ref inputs "LABEL") "FILE")
to one of:
(search-input-file inputs "FILE")
(search-input-directory inputs "FILE")
* gnu/packages/axoloti.scm (axoloti-patcher): Use
'search-input-directory'.
(axoloti-patcher-next): Likewise.
* gnu/packages/bioinformatics.scm (java-picard): Likewise.
* gnu/packages/bootloaders.scm (grub-hybrid): Likewise.
(u-boot-puma-rk3399): Likewise.
(u-boot-rock64-rk3328): Likewise.
(u-boot-firefly-rk3399): Likewise.
(u-boot-rockpro64-rk3399): Likewise.
(u-boot-pinebook-pro-rk3399): Likewise.
* gnu/packages/cran.scm (r-shiny): Likewise.
(r-shinytree): Likewise.
* gnu/packages/education.scm (anki): Likewise.
* gnu/packages/emacs-xyz.scm (emacs-flycheck-grammalecte): Likewise.
(emacs-rime): Likewise.
* gnu/packages/emulators.scm (dolphin-emu): Likewise.
* gnu/packages/games.scm (bsd-games): Likewise.
(seahorse-adventures): Likewise.
(einstein): Likewise.
* gnu/packages/gimp.scm (gimp-fourier): Likewise.
* gnu/packages/gnome.scm (gspell): Likewise.
* gnu/packages/guile-xyz.scm (guile-libyaml): Likewise.
* gnu/packages/java.scm (icedtea-7): Likewise.
* gnu/packages/language.scm (nimf): Likewise.
* gnu/packages/lxde.scm (spacefm): Likewise.
* gnu/packages/mail.scm (claws-mail): Likewise.
* gnu/packages/netpbm.scm (netpbm): Likewise.
* gnu/packages/networking.scm (blueman): Likewise.
* gnu/packages/scheme.scm (scm): Likewise.
* gnu/packages/security-token.scm (python-fido2): Likewise.
* gnu/packages/syndication.scm (rtv): Likewise.
* gnu/packages/tls.scm (acme-client): Likewise.
* gnu/packages/web.scm (netsurf): Likewise.
* gnu/packages/wine.scm (wine-staging): Likewise.
* gnu/packages/wxwidgets.scm (wxwidgets): Likewise.
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* gnu/packages/bioinformatics.scm (java-picard-1.113): Use
'search-input-file' when looking for *.jar.
(fastqc): Likewise.
* gnu/packages/groovy.scm (groovy): Likewise.
* gnu/packages/java.scm (ant-bootstrap): Likewise.
(ecj-bootstrap): Likewise.
(java-cisd-base): Likewise.
(java-cisd-args4j): Likewise.
(java-cisd-jhdf5): Likewise.
(java-native-access): Likewise.
(java-native-access-platform): Likewise.
* gnu/packages/maths.scm (hdf-java): Likewise.
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* gnu/packages/admin.scm (isc-dhcp): Use 'search-input-file' when
looking for executables.
* gnu/packages/audio.scm (ableton-link): Likewise.
* gnu/packages/benchmark.scm (fio): Likewise.
* gnu/packages/bioinformatics.scm (roary): Likewise.
(ngless): Likewise.
* gnu/packages/boost.scm (boost-for-irods): Likewise.
* gnu/packages/bootloaders.scm (grub): Likewise.
(grub-efi): Likewise.
* gnu/packages/chemistry.scm (inchi): Likewise.
* gnu/packages/dictionaries.scm (ding): Likewise.
* gnu/packages/dlang.scm (ldc): Likewise.
* gnu/packages/education.scm (childsplay): Likewise.
* gnu/packages/emacs-xyz.scm (emacs-hyperbole): Likewise.
(emacs-haskell-mode): Likewise.
(emacs-auctex): Likewise.
(emacs-ggtags): Likewise.
(emacs-graphviz-dot-mode): Likewise.
(emacs-flycheck-grammalecte): Likewise.
(emacs-counsel-notmuch): Likewise.
(emacspeak): Likewise.
(emacs-exwm): Likewise.
(emacs-exwm-x): Likewise.
(emacs-treemacs): Likewise.
(emacs-telega): Likewise.
(emacs-exiftool): Likewise.
* gnu/packages/emulators.scm (higan): Likewise.
* gnu/packages/engineering.scm (freehdl): Likewise.
(librepcb): Likewise.
* gnu/packages/entr.scm (entr): Likewise.
* gnu/packages/file-systems.scm (libeatmydata): Likewise.
(xfstests): Likewise.
(mergerfs): Likewise.
(mergerfs-tools): Likewise.
* gnu/packages/finance.scm (monero-gui): Likewise.
* gnu/packages/flashing-tools.scm (flashrom): Likewise.
* gnu/packages/fontutils.scm (fontforge): Likewise.
* gnu/packages/game-development.scm (python2-renpy): Likewise.
* gnu/packages/games.scm (opensurge): Likewise.
(xboard): Likewise.
(hyperrogue): Likewise.
(flare-game): Likewise.
(chessx): Likewise.
* gnu/packages/geo.scm (grass): Likewise.
* gnu/packages/glib.scm (glib): Likewise.
* gnu/packages/gnome.scm (mm-common): Likewise.
(network-manager-openvpn): Likewise.
(network-manager-vpnc): Likewise.
(network-manager-openconnect): Likewise.
(apostrophe): Likewise.
* gnu/packages/gnupg.scm (pius): Likewise.
(jetring): Likewise.
* gnu/packages/gnuzilla.scm (icedove): Likewise.
* gnu/packages/golang.scm (go-1.4): Likewise.
* gnu/packages/graphviz.scm (xdot): Likewise.
* gnu/packages/guile-xyz.scm (jupyter-guile-kernel): Likewise.
* gnu/packages/haskell-xyz.scm (ghc-hindent): Likewise.
* gnu/packages/ibus.scm (ibus): Likewise.
* gnu/packages/image.scm (phockup): Likewise.
* gnu/packages/irc.scm (quassel): Likewise.
* gnu/packages/java.scm (drip): Likewise.
(ant-bootstrap): Likewise.
(tla2tools): Likewise.
* gnu/packages/julia.scm (julia): Likewise.
* gnu/packages/less.scm (lesspipe): Likewise.
* gnu/packages/libreoffice.scm (libreoffice): Likewise.
* gnu/packages/linux.scm (fuse): Likewise.
(lm-sensors): Likewise.
(bluez): Likewise.
(fakeroot): Likewise.
(inputattach): Likewise.
* gnu/packages/lisp-xyz.scm (sbcl-cl-diskspace): Likewise.
* gnu/packages/lisp.scm (lisp-repl-core-dumper): Likewise.
* gnu/packages/lua.scm (fennel): Likewise.
* gnu/packages/lxde.scm (spacefm): Likewise.
* gnu/packages/mail.scm (public-inbox): Likewise.
* gnu/packages/maths.scm (hdf-java): Likewise.
(maxima): Likewise.
(frama-c): Likewise.
* gnu/packages/messaging.scm (libgadu): Likewise.
* gnu/packages/music.scm (denemo): Likewise.
(curseradio): Likewise.
* gnu/packages/netpbm.scm (netpbm): Likewise.
* gnu/packages/networking.scm (blueman): Likewise.
(squid): Likewise.
(aircrack-ng): Likewise.
* gnu/packages/node.scm (node): Likewise.
(node-llparse-frontend-bootstrap): Likewise.
(node-llparse-bootstrap): Likewise.
(llhttp-bootstrap): Likewise.
(node-lts): Likewise.
* gnu/packages/ocaml.scm (ocaml-4.11): Likewise.
(opam): Likewise.
(ocaml-graph): Likewise.
* gnu/packages/orpheus.scm (orpheus): Likewise.
* gnu/packages/password-utils.scm (password-store): Likewise.
* gnu/packages/python.scm (pypy3): Likewise.
* gnu/packages/qt.scm (qt5ct): Likewise.
* gnu/packages/radio.scm (libosmo-dsp): Likewise.
* gnu/packages/ruby.scm (ruby-pandoc-ruby): Likewise.
* gnu/packages/rust.scm (rust-1.30): Likewise.
* gnu/packages/screen.scm (byobu): Likewise.
* gnu/packages/statistics.scm (r-with-tests): Likewise.
* gnu/packages/suckless.scm (surf): Likewise.
* gnu/packages/syndication.scm (gfeeds): Likewise.
* gnu/packages/telephony.scm (mumble): Likewise.
* gnu/packages/terminals.scm (alacritty): Likewise.
* gnu/packages/tex.scm (texlive-bin): Likewise.
* gnu/packages/uml.scm (plantuml): Likewise.
* gnu/packages/version-control.scm (python-git-multimail): Likewise.
(gitolite): Likewise.
(hg-commitsigs): Likewise.
(git-when-merged): Likewise.
(git-imerge): Likewise.
(gita): Likewise.
* gnu/packages/video.scm (you-get): Likewise.
* gnu/packages/vim.scm (eovim): Likewise.
* gnu/packages/virtualization.scm (qemu): Likewise.
(virt-manager): Likewise.
(criu): Likewise.
* gnu/packages/vpn.scm (strongswan): Likewise.
(xl2tpd): Likewise.
* gnu/packages/wm.scm (i3lock-fancy): Likewise.
* gnu/packages/wxwidgets.scm (python-wxpython): Likewise.
(python2-wxpython): Likewise.
* gnu/packages/xdisorg.scm (autorandr): Likewise.
* gnu/packages/xorg.scm (hackneyed-x11-cursors): Likewise.
(v86d): Likewise.
(mkfontdir): Likewise.
(xpra): Likewise.
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