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2016-08-04Merge branch 'core-updates'Mark H Weaver
2016-08-04Revert "Merge branch 'core-updates'"Mark H Weaver
This reverts commit 455859a50f88f625d13fc2f304111f02369b366b.
2016-08-03Rename references to (gnu packages tcsh).ng0
* gnu/packages/algebra.scm, gnu/packages/boost.scm, gnu/packages/maths.scm, gnu/packages/tex.scm, gnu/packages/vim.scm: Change broken references to module (gnu packages tcsh) to (gnu packages shells).
2016-08-01Merge branch 'core-updates'Ludovic Courtès
2016-07-31Merge branch 'master' into core-updatesMark H Weaver
2016-08-01gnu: units: Update to 2.13.Ludovic Courtès
* gnu/packages/maths.scm (units): Update to 2.13.
2016-07-31gnu: dealii: Update to 8.4.1.Andreas Enge
* gnu/packages/maths.scm (dealii): Update to 8.4.1. * gnu/packages/patches/dealii-p4est-interface.patch: Remove file.
2016-07-29Merge branch 'master' into core-updatesMark H Weaver
2016-07-29gnu: Sync GNU descriptions with upstream.Ludovic Courtès
From 'guix lint -c gnu-description'. * gnu/packages/gnunet.scm (gnunet): Adjust description. * gnu/packages/marst.scm (marst): Likewise. * gnu/packages/maths.scm (c-graph): Likewise. * gnu/packages/networking.scm (macchanger): Likewise.
2016-07-26gnu: lpsolve: Fix compilation issue.Ludovic Courtès
Reported by Andreas Enge <andreas@enge.fr> at <https://lists.gnu.org/archive/html/guix-devel/2016-07/msg01018.html>. * gnu/packages/maths.scm (lpsolve)[source]: Augment 'snippet'.
2016-07-26gnu: lpsolve: Fail as early as possible.Ludovic Courtès
* gnu/packages/maths.scm (lpsolve)[arguments]: In 'build' phase, check the return value of 'system*' and honor it.
2016-07-22gnu: gnuplot: Update to upstream's re-release of 5.0.4.Efraim Flashner
* gnu/packages/maths.scm (gnuplot): Add a guix revision number to the version scheme of gnuplot to force an update.
2016-07-21gnu: muparser: Update source URL.Leo Famulari
* gnu/packages/maths.scm (muparser)[source]: Update source URL to new location. Use URL-FETCH instead of SVN-FETCH. Update hash and package revision.
2016-07-21gnu: Update URLs for sourceforge.net.Leo Famulari
* gnu/packages/admin.scm: Update URLs pointing to sourceforge.net. * gnu/packages/audacity.scm: Likewise. * gnu/packages/audio.scm: Likewise. * gnu/packages/bioinformatics.scm: Likewise. * gnu/packages/boost.scm: Likewise. * gnu/packages/cdrom.scm: Likewise. * gnu/packages/code.scm: Likewise. * gnu/packages/compression.scm: Likewise. * gnu/packages/cups.scm: Likewise. * gnu/packages/djvu.scm: Likewise. * gnu/packages/docbook.scm: Likewise. * gnu/packages/documentation.scm: Likewise. * gnu/packages/flashing-tools.scm: Likewise. * gnu/packages/fonts.scm: Likewise. * gnu/packages/fontutils.scm: Likewise. * gnu/packages/games.scm: Likewise. * gnu/packages/ghostscript.scm: Likewise. * gnu/packages/gl.scm: Likewise. * gnu/packages/gnucash.scm: Likewise. * gnu/packages/graphviz.scm: Likewise. * gnu/packages/image.scm: Likewise. * gnu/packages/libreoffice.scm: Likewise. * gnu/packages/libusb.scm: Likewise. * gnu/packages/linux.scm: Likewise. * gnu/packages/lirc.scm: Likewise. * gnu/packages/maths.scm: Likewise. * gnu/packages/mcrypt.scm: Likewise. * gnu/packages/mp3.scm: Likewise. * gnu/packages/music.scm: Likewise. * gnu/packages/networking.scm: Likewise. * gnu/packages/onc-rpc.scm: Likewise. * gnu/packages/password-utils.scm: Likewise. * gnu/packages/pdf.scm: Likewise. * gnu/packages/perl.scm: Likewise. * gnu/packages/photo.scm: Likewise. * gnu/packages/popt.scm: Likewise. * gnu/packages/python.scm: Likewise. * gnu/packages/rdesktop.scm: Likewise. * gnu/packages/screen.scm: Likewise. * gnu/packages/swig.scm: Likewise. * gnu/packages/tcl.scm: Likewise. * gnu/packages/version-control.scm: Likewise. * gnu/packages/video.scm: Likewise. * gnu/packages/w3m.scm: Likewise. * gnu/packages/web.scm: Likewise. * gnu/packages/wm.scm: Likewise. * gnu/packages/xdisorg.scm: Likewise. * gnu/packages/xml.scm: Likewise.
2016-07-21gnu: gnuplot: Update to 5.0.4.Efraim Flashner
* gnu/packages/maths.scm (gnuplot): Update to 5.0.4.
2016-07-20gnu: superlu-dist: Remove non-free source.Eric Bavier
* gnu/packages/maths.scm (superlu-dist)[source]: Replace non-free mc64ad.c source with stub.
2016-07-20gnu: slepc: Update to 3.7.1.Eric Bavier
* gnu/packages/maths.scm (slepc): Update to 3.7.1.
2016-07-20gnu: petsc: Update to 3.7.2.Eric Bavier
* gnu/packages/maths.scm (petsc): Update to 3.7.2. [arguments]: Adjust scrubbed files.
2016-07-20gnu: petsc: Make header generation reproducible.Eric Bavier
* gnu/packages/maths.scm (petsc)[arguments]: Scrub timestamp from petscmachineinfo.h header.
2016-07-20gnu: petsc: Use modify-phases.Eric Bavier
* gnu/packages/maths.scm (petsc)[arguments]: Use modify-phases.
2016-07-20gnu: superlu: Update to 5.2.1.Eric Bavier
* gnu/packages/maths.scm (superlu): Update to 5.2.1. [source]: Remove non-free MC64 code. [inputs]: Use openblas instead of lapack's BLAS. [build-system]: Use cmake-build-system. [arguments]: Remove custom phases and replace with CMake flags. [license]: List additional licenses for some source and example files.
2016-07-20gnu: Add libhilbert.Eric Bavier
* gnu/packages/maths.scm (libhilbert): New variable.
2016-07-19gnu: atlas: Use @example in description.Ludovic Courtès
* gnu/packages/maths.scm (atlas)[description]: Use "@example".
2016-07-19gnu: atlas: Use cpupower in description.Tobias Geerinckx-Rice
* gnu/packages/maths.scm (atlas)[description]: Replace 'cpufreq-selector' with its replacement 'cpupower --governor'. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-17gnu: lapack: Build the LAPACKE library.Ricardo Wurmus
* gnu/packages/maths.scm (lapack)[arguments]: Add "-DLAPACKE=ON".
2016-07-03gnu: openspecfun: Update to 0.5.2.Efraim Flashner
* gnu/packages/maths.scm (openspecfun): Update to 0.5.2.
2016-07-03gnu: openlibm: Update to 0.5.1.Efraim Flashner
* gnu/packages/maths.scm (openlibm): Update to 0.5.1.
2016-06-29gnu: ceres-solver: Propagate GLOG.Ludovic Courtès
* gnu/packages/maths.scm (ceres)[inputs]: Move GLOG to... [propagated-inputs]: ... here. New field.
2016-06-29gnu: ceres-solver: Depend on glog.Ludovic Courtès
* gnu/packages/maths.scm (ceres)[arguments]: Remove -DMINIGLOG=ON. [inputs]: Add GLOG.
2016-06-03gnu: ipopt: Use libblas from LAPACK, and fix 'Libs' in 'ipopt.pc'.Ludovic Courtès
* gnu/packages/maths.scm (ipopt)[inputs]: Remove OPENBLAS. [arguments]: New field.
2016-06-03gnu: Add ceres-solver.Ludovic Courtès
* gnu/packages/maths.scm (ceres): New variable.
2016-06-02gnu: Add IpOpt.Ludovic Courtès
* gnu/packages/maths.scm (ipopt): New variable.
2016-05-28gnu: wxmaxima: Wrap with GSETTINGS_SCHEMA_DIR and XDG_DATA_DIRS.宋文武
Fixes <http://bugs.gnu.org/22709> and <http://bugs.gnu.org/23260>. * gnu/packages/math.scm (wxmaxima)[arguments]: Wrap with GSETTINGS_SCHEMA_DIR and XDG_DATA_DIRS.
2016-05-26gnu: Rename texlive module to tex.Roel Janssen
* gnu/local.mk (GNU_SYSTEM_MODULES): Rename texlive.scm to tex.scm. * gnu/packages/texlive.scm: Rename file to tex.scm. * gnu/packages/tex.scm: Renamed from texlive.scm. * gnu/packages/algebra.scm: Adjust accordingly. * gnu/packages/docbook.scm: Likewise. * gnu/packages/engineering.scm: Likewise. * gnu/packages/gettext.scm: Likewise. * gnu/packages/gnome.scm: Likewise. * gnu/packages/lisp.scm: Likewise. * gnu/packages/maths.scm: Likewise. * gnu/packages/music.scm: Likewise. * gnu/packages/ocaml.scm: Likewise. * gnu/packages/photo.scm: Likewise. * gnu/packages/plotutils.scm: Likewise. * gnu/packages/python.scm: Likewise. * gnu/packages/scheme.scm: Likewise.
2016-05-20gnu: r-rcpparmadillo: Update to 0.6.700.6.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.6.700.6.0. * gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to 6.700.6.
2016-05-20gnu: armadillo: Update to 6.700.7.Ricardo Wurmus
* gnu/packages/maths.scm (armadillo): Update to 6.700.7.
2016-05-19gnu: flann: Do not install .a files.Ludovic Courtès
* gnu/packages/maths.scm (flann)[arguments]: Add #:phases.
2016-05-19gnu: flann: Strip .mex file.Ludovic Courtès
* gnu/packages/maths.scm (flann)[arguments]: Add #:strip-directories.
2016-05-19gnu: octave: Update to 4.0.2.Kei Yamashita
* gnu/packages/maths.scm (octave): Update to 4.0.2. [inputs]: Added cyrus-sasl, openssl. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-05-16gnu: gmsh: Add missing inputs.Efraim Flashner
* gnu/packages/maths.scm (gmsh)[inputs]: Add fontconfig, libxft.
2016-05-15gnu: wxmaxima: Update to 16.04.2.宋文武
* gnu/packages/maths.scm (wxmaxima): Update to 16.04.2.
2016-05-12gnu: Add NetCDF.Eric Bavier
* gnu/packages/maths.scm (netcdf, netcdf-parallel-openmpi): New variables.
2016-05-12gnu: Add Matio.Eric Bavier
* gnu/packages/maths.scm (matio): New variable.
2016-05-12gnu: Add h5check.Eric Bavier
* gnu/packages/maths.scm (h5check): New variable.
2016-05-12gnu: Add hdf5-openmpi.Eric Bavier
* gnu/packages/maths.scm (hdf5-openmpi): New variable.
2016-05-12gnu: hdf5: Have configure honor SOURCE_DATE_EPOCH.Eric Bavier
* gnu/packages/patches/hdf5-config-date.patch: New patch. * gnu/packages/maths.scm (hdf5)[source]: Use it. * gnu-system.am (dist_patch_DATA): Add it.
2016-05-12gnu: hdf5: Patch output references to zlib.Eric Bavier
* gnu/packages/maths.scm (hdf5)[arguments]: Use modify-phases. Add 'patch-references' phase.
2016-05-12gnu: hdf5: Update to 1.8.17.Eric Bavier
* gnu/packages/maths.scm (hdf5): Update to 1.8.17.
2016-05-12gnu: Add HYPRE.Eric Bavier
* gnu/packages/maths.scm (hypre, hypre-openmpi): New variables. * gnu/packages/patches/hypre-doc-tables.patch, gnu/packages/patches/hypre-ldflags.patch: New files. * gnu-system.am (dist_patch_DATA): Add them.
2016-05-03gnu: Add nlopt.Roel Janssen
* gnu/packages/maths.scm (nlopt): New variable. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
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