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2020-09-28gnu: Remove icecat-68 source.Jonathan Brielmaier
It was necessary for icedove@68 which is now based on icecat@78. * gnu/packages/gnuzilla.scm (mozilla-68-compare-locales): Remove. (all-mozilla-68-locales): Remove. (%icecat-68-version): Remove. (icecat-68-source): Remove. * gnu/packages/patches/icecat-68-makeicecat.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Modified-By: Mark H Weaver <mhw@netris.org> Signed-off-by: Mark H Weaver <mhw@netris.org>
2020-09-28gnu: Add nss@3.56.Jonathan Brielmaier
Icedove 78 requires nss > 3.53. This version is the only one building out-of-the-box. * gnu/packages/nss.scm (nss-3.56): New variable. * gnu/packages/patches/nss-3.56-pkgconfig.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Signed-off-by: Mark H Weaver <mhw@netris.org>
2020-09-23gnu: fplll: Correct include files.Andreas Enge
* gnu/packages/patches/fplll-std-fenv.patch: New patch. * gnu/local.mk (dist_patch_DATA): Register patch. * gnu/packages/algebra.scm (fplll): Use patch and move all inputs to propagated-inputs.
2020-09-22gnu: samba: Fix fcntl hint detection in configure script.Pierre Langlois
The configure script generates a C program to detect support for lifetime hints on files. But this program could crash, potentially leaving a stale unreadable file behind which could cause the patch-generated-file-shebang phase to fail. Reported upstream <https://bugzilla.samba.org/show_bug.cgi?id=14503>. * gnu/packages/patches/patches/samba-fix-fcntl-hint-detection.patch: New file. * gnu/packages/samba.scm (samba)[origin]: Add patch. * gnu/local.mk (dist_patch_DATA): Register patch.
2020-09-22gnu: icecat: Update to 78.3.0-guix0-preview1 [security-fixes].Mark H Weaver
Includes fixes for CVE-2020-15673, CVE-2020-15676, CVE-2020-15677, and CVE-2020-15678. * gnu/packages/gnuzilla.scm (mozilla-compare-locales): Update to RELEASE_8_0_0. (all-mozilla-locales): Update to newer versions. (mozilla-patch): Remove vestigial procedure. (%icecat-version, %icecat-build-id): Update to 78.3.0-guix0-preview1. (icecat-source): Update 'upstream-icecat-base-version', 'gnuzilla-commit', and hashes. Reverse order of makeicecat-patch and gnuzilla-fixes-patch. (icecat)[inputs]: Remove libogg, libvorbis, libvpx, icu4c, sqlite, startup-notification, and zlib. Add several "UNBUNDLE-ME!" comments. [native-inputs]: Update 'rust' and 'cargo' dependencies to version 1.41. Update 'rust-cbindgen' dependency to version 0.14. Update 'node' dependency to 10.22. [arguments]<configure-flags>: Change --enable-default-toolkit value to "cairo-gtk3-wayland". Change --with-unsigned-addon-scopes value to "app,system". Add "--allow-addon-sideload". Remove "--enable-startup-notification" and "--disable-gconf". Comment out "--with-system-zlib", "--with-system-bz2", and "--with-system-icu". <phases>: In the 'remove-bundled-libaries' phase, remove "modules/zlib" from the list of directories to delete. Update the 'patch-cargo-checksums' phase to update more modules. (mozilla-68-compare-locales, all-mozilla-68-locales, %icecat-68-version) (icecat-68-source): New variables preserving the previous icecat 68 source. (icedove)[source]: Use 'icecat-68-source'. * gnu/packages/patches/icecat-makeicecat.patch: Adapt to IceCat 78. * gnu/packages/patches/icecat-68-makeicecat.patch: New file containing the previous 'icecat-makeicecat.patch'. * gnu/local.mk: Add 'icecat-68-makeicecat.patch'.
2020-09-20gnu: Add java-antlr4-runtime.Julien Lepiller
* gnu/packages/java.scm (java-antlr4-runtime): New variable. * gnu/packages/patches/java-antlr4-Add-standalone-generator.patch: New file. * gnu/packages/patches/java-antlr4-fix-code-too-large.java: New file. * gnu/local.mk (dist_patch_DATA): Add them.
2020-09-19gnu: qemu: Install the full documentation as an info manual.Maxim Cournoyer
* gnu/packages/patches/qemu-build-info-manual.patch: Add patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/virtualization.scm (qemu)[source]: Use it. [phases]{install-info}: Remove phase. {create-samba-wrapper}: Add after 'install.
2020-09-18gnu: gnome-settings-daemon: Add "guix gc" to low disk space notification.Ludovic Courtès
* gnu/packages/patches/gnome-settings-daemon-gc.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gnome.scm (gnome-settings-daemon)[source]: Use it.
2020-09-16gnu: mailutils: Fix unitialized variable in readmsg.Pierre Langlois
Fixes <https://bugs.gnu.org/43088>. * gnu/packages/patches/mailutils-fix-uninitialized-variable.patch: New file. * gnu/packages/mail.scm (mailutils)[source]: Add patch. * gnu/local.mk (dist_patch_DATA): Register patch.
2020-09-08genimage: Add patch needed for the test on ARM architectures.Andreas Enge
* gnu/packages/patches/genimage-signedness.patch: New file. * gnu/packages/genimage.scm (genimage)[source]: Add patch. * gnu/local.mk (dist_patch_DATA): Register patch.
2020-09-05gnu: Update gPodder to 3.10.16 and disable updater.raingloom
* gnu/packages/gpodder.scm (gpodder): Update to 3.10.16 and add patch. * gnu/packages/patches/gpodder-disable-updater.patch: New file * gnu/local.mk (dist_patch_DATA): Add patch Signed-off-by: Andreas Enge <andreas@enge.fr>
2020-09-04gnu: r-httpuv: Unvendor libuv.Lars-Dominik Braun
* gnu/packages/cran.scm (r-httpuv) [source]: Remove bundled libuv, add patch. [arguments] Rewrite header locations, fix pipe server issue. [inputs] Add libuv. * gnu/packages/patches/r-httpuv-1.5.4-unvendor-libuv.patch: New file. * gnu/local.mk: Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-09-02gnu: xmonad: Add patch to support dynamic linking.Timothy Sample
Fixes <https://bugs.gnu.org/43131>. * gnu/packages/patches/xmonad-dynamic-linking.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/wm.scm (xmonad)[source]: Use it.
2020-09-01gnu: ttfautohint: Update to 1.8.3.Efraim Flashner
* gnu/packages/fontutils.scm (ttfautohint): Update to 1.8.3. [source]: Remove patch. * gnu/packages/patches/ttfautohint-source-date-epoch.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
2020-09-01gnu: xf86-video-sis: Update to 0.12.0.Efraim Flashner
* gnu/packages/xorg.scm (xf86-video-sis): Update to 0.12.0. [source]: Remove patch. * gnu/packages/patches/xf86-video-sis-xorg-compat.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
2020-09-01gnu: wgetpaste: Update bpaste URL & regular expressions.Tobias Geerinckx-Rice
* gnu/packages/wget.scm (wgetpaste)[source]: Add patch. * gnu/packages/patches/wgetpaste-update-bpaste.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2020-08-31gnu: sooperlooper: Update to 1.7.4.Tobias Geerinckx-Rice
* gnu/packages/music.scm (sooperlooper): Update to 1.7.4. [source]: Remove upstreamed patch. * gnu/packages/patches/sooperlooper-build-with-wx-30.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2020-08-29gnu: Add fpc.Kei Kebreau
* gnu/packages/pascal.scm: New file. * gnu/packages/patches/fpc-reproducibility.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add pascal.scm. (dist_patch_DATA): Register patch. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2020-08-28gnu: emacs: Update to 27.1.Mark H Weaver
* gnu/packages/emacs.scm (emacs): Update to 27.1. [source]: In snippet, use 'find-files' to find 'eshell/esh-groups.el' if it exists, but gracefully handle its absence. [arguments]: Add "--with-cairo" to configure-flags. Add 'restore-emacs-pdmp' and 'make-compressed-files-writable' phases. Explicitly return #t from 'install-site-start' phase. [inputs]: Add cairo, pango, harfbuzz, jansson, and gmp. Remove imagemagick. (emacs-next): Remove variable. (emacs-minimal, emacs-xwidgets): Use 'package/inherit'. [arguments]: Remove 'restore-emacs-pdmp' phase. (emacs-no-x): Use 'package/inherit'. [arguments]: Remove "--with-cairo" from configure-flags. Remove 'restore-emacs-pdmp' phase. [inputs]: Remove cairo, pango, and harfbuzz. (emacs-no-x-toolkit): Use 'package/inherit'. [arguments]: Remove 'restore-emacs-pdmp' phase. Remove superfluous quasiquote+unquote-splicing pair. (emacs-wide-int): Use 'package/inherit'. (guile-emacs): Use 'package/inherit'. [arguments]: Remove "--with-cairo" from configure-flags. Remove 'restore-emacs-pdmp' phase. * gnu/packages/patches/emacs-ignore-empty-xim-styles.patch, gnu/packages/patches/emacs-source-date-epoch.patch: Adapt to apply cleanly to emacs-27.1. * gnu/packages/patches/emacs-exec-path.patch: Replace with the previous contents of 'emacs27-exec-path.patch', but remove the superfluous comment about it being "like emacs-exec-path.patch, but for Emacs 27". * gnu/packages/patches/emacs27-exec-path.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove 'emacs27-exec-path.patch'.
2020-08-27gnu: sssd: Pass '--localstatedir=/var' and '--sysconfdir=/etc'.Ludovic Courtès
This ensures notably that libnss_sss looks for the mmap cache files in the right place, /var/lib/sss/mc, rather than in the store. * gnu/packages/patches/sssd-system-directories.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/sssd.scm (sssd)[source]: Use it. [arguments]: Pass "--localstatedir" and "--sysconfdir".
2020-08-27gnu: vcflib: Use shared libraries.Efraim Flashner
* gnu/packages/bioinformatics.scm (vcflib)[source]: Add patch. Add snippet to adjust files for new locations. [inputs]: Add fastahack, smithwaterman, tabixpp, xz. [native-inputs]: Add pkg-config. Remove the package-source of fastahack, fsom, smithwaterman, tabixpp. [arguments]: Remove make-flags. Add custom phase to add the output lib directory to the rpath. Adjust custom 'unpack-submodule-sources for the change in native-inputs. Adjust custom 'install phase to also install libraries and headers. * gnu/packages/patches/vcflib-use-shared-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2020-08-27gnu: xorg-server: Update replacement to 1.20.9 [security-fixes].Mark H Weaver
Includes fixes for CVE-2020-1436, CVE-2020-14345, CVE-2020-14346, and CVE-2020-14361. * gnu/packages/xorg.scm (xorg-server/fixed): Update to 1.20.9. * gnu/packages/patches/xorg-server-CVE-2020-14347.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2020-08-25gnu: icecat: Update to 68.12.0-guix0-preview1 [security fixes].Mark H Weaver
Includes fixes for CVE-2020-15663, CVE-2020-15664, and CVE-2020-15669. * gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update. (icecat-source): Update gnuzilla commit, base version, and hashes. * gnu/packages/patches/icecat-makeicecat.patch: Adapt to new version.
2020-08-20gnu: libmhash: Fix use-after-free in tests.Eric Bavier
* gnu/packages/patches/libmhash-hmac-fix-uaf.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/mcrypt.scm (libmhash)[source]: Use it.
2020-08-19gnu: unknown-horizons: Fix build with python@3.8 and python-pytest@5.Tobias Geerinckx-Rice
* gnu/packages/games.scm (unknown-horizons)[source]: Add patch. [arguments]: Add a ‘fix-tests-with-pytest>=4’ phase. [native-inputs]: Add python-distro. * gnu/packages/patches/unknown-horizons-python-3.8-distro.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2020-08-19gnu: xf86-video-geode: Remove unnecessary patch.Tobias Geerinckx-Rice
* gnu/packages/xorg.scm (xf86-video-geode)[source]: Remove patch. * gnu/packages/patches/xf86-video-geode-glibc-2.20.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2020-08-19gnu: Add transcode.Raghav Gururajan
* gnu/packages/video.scm (transcode): New variable. * gnu/packages/patches/transcode-ffmpeg.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2020-08-18gnu: Add liblouisutdml.Raghav Gururajan
* gnu/packages/language.scm (liblouisutdml): New variable. * gnu/packages/patches/liblouisutdml-fix-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2020-08-18gnu: Add ldns.Raghav Gururajan
* gnu/packages/dns.scm (ldns): New variable. * gnu/packages/patches/ldns-drill-examples.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2020-08-18gnu: Add seed.Raghav Gururajan
* gnu/packages/gnome.scm (seed): New variable. * gnu/packages/patches/seed-webkit.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2020-08-18gnu: Add dee.Raghav Gururajan
* gnu/packages/gnome.scm (dee): New variable. * gnu/packages/patches/dee-vapi.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2020-08-18gnu: Add opensles.Raghav Gururajan
* gnu/packages/audio.scm (opensles): New variable. * gnu/packages/patches/opensles-add-license-file.patch: New file. * gnu/local.mk (opensles-add-license-file.patch): New reference. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2020-08-18gnu: Add libofa.Raghav Gururajan
* gnu/packages/audio.scm (libofa): New variable. * gnu/packages/patches/libofa-ftbfs-1.diff: New file. * gnu/packages/patches/libofa-curl.diff: New file. * gnu/packages/patches/libofa-ftbfs-2.diff: New file. * gnu/local.mk (dist_patch_DATA): Add them. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2020-08-18gnu: Add libquicktime.Raghav Gururajan
* gnu/packages/video.scm (libquicktime): New variable. * gnu/packages/patches/libquicktime-ffmpeg.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2020-08-16gnu: webkitgtk: Expose all font locations to the bubblewrap sandbox.Leo Prikler
Fixes <https://issues.guix.gnu.org/41174> and <https://issues.guix.gnu.org/42618>. The webkitgtk library relied on by Epiphany and others uses bubblewrap to sandbox its process. This sandbox was only exposing fonts relative to XDG_DATA_HOME. Extend it so that it honors font locations specified via XDG_DATA_DIRS as well, which is what Guix uses. * gnu/packages/patches/webkitgtk-bind-all-fonts.patch: Add patch. * gnu/local.mk: Register it. * gnu/packages/webkit.scm (webkitgtk)[source]<patches>: Use it. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2020-08-16gnu: ola: Build with libmicrohttpd 0.9.71.Tobias Geerinckx-Rice
* gnu/packages/lighting.scm (ola)[source]: Update to 0.10.7-0.5d88293. [source]: Use GIT-FETCH & GIT-FILE-NAME. Remove patch. [native-inputs]: Add autoconf, automake, and libtool. * gnu/packages/patches/ola-readdir-r.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2020-08-16gnu: Add dbxfs.Efraim Flashner
* gnu/packages/file-systems.scm (dbxfs): New variable. * gnu/packages/patches/dbxfs-remove-sentry-sdk.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2020-08-15gnu: gvfs: Fix build with libplist 2.2.0.Kei Kebreau
* gnu/packages/gnome.scm (gvfs)[source]: Add patch. * gnu/packages/patches/gvfs-add-support-for-libplist-2.2.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2020-08-13gnu: opencv: Fix build with Jasper 2.0.19.Tobias Geerinckx-Rice
* gnu/packages/image-processing.scm (opencv)[source]: Add patch. * gnu/packages/patches/opencv-fix-build-of-grfmt_jpeg2000.cpp.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2020-08-12gnu: freedink-engine: Fix SDL hints.Jesse Gibbons
* gnu/packages/games.scm: freedink: [patches]: Add fix. * gnu/packages/patches/freedink-engine-fix-sdl-hints.patch: New file. * gnu/local.mk: Add it. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-08-11gnu: clang-runtime-3.5: Fix build.Ricardo Wurmus
* gnu/packages/patches/clang-runtime-3.5-libsanitizer-mode-field.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/llvm.scm (clang-runtime-3.5): Add patch.
2020-08-09gnu: python-alembic: Update to 1.4.2.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (python-alembic): Update to 1.4.2. [source]: Remove patch. * gnu/packages/patches/python-alembic-exceptions-cause.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2020-08-08gnu: lib2geom: Update to commit 17e0d21f.Maxim Cournoyer
* gnu/packages/patches/lib2geom-enable-assertions.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Unregister it. * gnu/packages/graphics.scm (lib2geom): Update to commit 17e0d21f0afc8489656f9184bff7ad024a42394a, and remove obsolete patch.
2020-08-06gnu: json-c: Fix CVE-2020-12762.Efraim Flashner
* gnu/packages/web.scm (json-c)[replacement]: New field. (json-c-0.13, json-c-0.12)[source]: Add patch. (json-c/fixed): New variable. * gnu/packages/patches/json-c-CVE-2020-12762.patch, gnu/packages/patches/json-c--0.13-CVE-2020-12762.patch, gnu/packages/patches/json-c--0.12-CVE-2020-12762.patch: New files. * gnu/local.mk (dist_patch_DATA): Register them.
2020-08-05gnu: pjproject: Update the pkg-config patch.Maxim Cournoyer
* gnu/packages/patches/pjproject-fix-pkg-config-ldflags.patch: Update patch.
2020-08-03gnu: pjproject: Fix problem in pkg-config file.Maxim Cournoyer
* gnu/packages/patches/pjproject-correct-the-cflags-field.patch: Add patch. * gnu/packages/patches/pjproject-fix-pkg-config-ldflags.patch: Likewise. * gnu/local.mk (dist_patch_DATA): Register the new patches. * gnu/packages/telephony.scm (pjproject): Use them. * gnu/packages/jami.scm (pjproject-jami): Remove a patch from pjproject-jami that is already applied against pjproject.
2020-08-03gnu: emacs: Ignore empty XIM styles.Leo Prikler
As of libx11 version 1.6.10, xim may be NULL, which causes a segmentation fault in the execution of ARRAYELTS. As a cautionary measure, we short-circuit this logic. * gnu/packages/patches/emacs-ignore-empty-xim-styles.patch: New file. * gnu/packages/emacs.scm (emacs emacs-next)[patches]: Use it. * gnu/local.mk: Register it. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-03gnu: Add python-onnx.Vinicius Monego
* gnu/packages/machine-learning.scm (python-onnx): New variable. * gnu/packages/patches/python-onnx-use-system-googletest.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-01gnu: Add Remake.Eric Bavier
* gnu/packages/debug.scm (remake): New variable. * gnu/packages/patches/remake-impure-dirs.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2020-08-01gnu: xorg-server: Fix CVE-2020-14347 via graft.Mark H Weaver
* gnu/packages/patches/xorg-server-CVE-2020-14347.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (xorg-server/fixed): New variable. (xorg-server)[replacement]: New field. (xorg-server-wayland): Use package/inherit.
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