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2016-08-04Merge branch 'core-updates'Mark H Weaver
2016-08-04Revert "Merge branch 'core-updates'"Mark H Weaver
This reverts commit 455859a50f88f625d13fc2f304111f02369b366b.
2016-08-04gnu: python-statsmodels: Fix tests.Ricardo Wurmus
* gnu/packages/statistics.scm (python-statsmodels): Add patch to fix tests. (python2-statsmodels)[propagated-inputs]: Add python2-pytz. * gnu/packages/patches/python-statsmodels-fix-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2016-08-02gnu: Add Elixir.Pjotr Prins
* gnu/packages/elixir.scm: New file. * gnu/packages/patches/elixir-disable-failing-tests.patch: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add module. (dist_patch_DATA): Add patch. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2016-08-01Merge branch 'core-updates'Ludovic Courtès
2016-08-01gnu: openssh: Update to 7.3p1.Mark H Weaver
* gnu/packages/ssh.scm (openssh): Update to 7.3p1. [source]: Remove patches. * gnu/packages/patches/openssh-CVE-2015-8325.patch, gnu/packages/patches/openssh-CVE-2016-6210-1.patch, gnu/packages/patches/openssh-CVE-2016-6210-2.patch, gnu/packages/patches/openssh-CVE-2016-6210-3.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
2016-07-31Merge branch 'master' into core-updatesMark H Weaver
2016-07-31gnu: rapicorn: Add patch to handle isnan.Andreas Enge
* gnu/packages/patches/rapicorn-isnan.patch: New file. * gnu/packages/graphics.scm (rapicorn)[source]: Add patch. * gnu/local.mk (dist_patch_DATA): Register patch.
2016-07-31gnu: dealii: Update to 8.4.1.Andreas Enge
* gnu/packages/maths.scm (dealii): Update to 8.4.1. * gnu/packages/patches/dealii-p4est-interface.patch: Remove file.
2016-07-31gnu: glibc-locales: Fix build.宋文武
* gnu/packages/patches/glibc-locales.patch: Adjust to glibc-2.23. * gnu/packages/base.scm (glibc-locales)[arguments]: Pass 'lib_cv_complocaledir'.
2016-07-29gnu: Add Tux Paint.Eric Bavier
* gnu/packages/games.scm (tuxpaint): New variable. * gnu/packages/patches/tuxpaint-stamps-path.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it.
2016-07-29gnu: beets: Update to 1.3.19.Alex Griffin
* gnu/packages/music.scm (beets): Update to 1.3.19. [source]: Remove patch to skip failing tests. * gnu/packages/patches/beets-image-test-failure.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-29Merge branch 'master' into core-updatesMark H Weaver
2016-07-29gnu: gd: Add fix for gd2_read test.Mark H Weaver
* gnu/packages/patches/gd-fix-gd2-read-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gd.scm (gd)[source]: Add patch.
2016-07-29Revert "gnu: gd: Add fix for gd2_read test."Mark H Weaver
This reverts commit ce290354ec4e97003be5f56042e55b36831818c1.
2016-07-29gnu: gd: Add fix for gd2_read test.Mark H Weaver
* gnu/packages/patches/gd-fix-gd2-read-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gd.scm (gd)[source]: Add patch.
2016-07-29Merge branch 'master' into core-updatesMark H Weaver
2016-07-29gnu: gd: Update to 2.2.3 [fixes CVE-2016-6207].Mark H Weaver
* gnu/packages/patches/gd-CVE-2016-5766.patch, gnu/packages/patches/gd-CVE-2016-6128.patch, gnu/packages/patches/gd-CVE-2016-6132.patch, gnu/packages/patches/gd-CVE-2016-6214.patch, gnu/packages/patches/gd-fix-test-on-i686.patch: Delete files. * gnu/packages/patches/gd-fix-tests-on-i686.patch: New file. * gnu/local.mk (dist_patch_DATA): Update accordingly. * gnu/packages/gd.scm (gd): Update to 2.2.3. [source]: Update patches field accordingly.
2016-07-28Merge branch 'master' into core-updatesLeo Famulari
2016-07-28Revert "gnu: gd: Update to 2.2.3 [fixes CVE-2016-6207]."Leo Famulari
This reverts commit ae46cd0e4cfb1f06d099b2cda1f9e702e86c90e9.
2016-07-28Merge branch 'master' into core-updatesMark H Weaver
2016-07-28gnu: gd: Update to 2.2.3 [fixes CVE-2016-6207].Mark H Weaver
* gnu/packages/patches/gd-CVE-2016-5766.patch, gnu/packages/patches/gd-CVE-2016-6128.patch, gnu/packages/patches/gd-CVE-2016-6132.patch, gnu/packages/patches/gd-CVE-2016-6214.patch, gnu/packages/patches/gd-fix-test-on-i686.patch: Delete files. * gnu/packages/patches/gd-fix-tests-on-i686.patch: New file. * gnu/local.mk (dist_patch_DATA): Update accordingly. * gnu/packages/gd.scm (gd): Update to 2.2.3. [source]: Update patches field accordingly.
2016-07-28gnu: dico: Patch 'idxgcide' bug.Ludovic Courtès
* gnu/packages/patches/dico-idxgcide-bug.patch: New file. * gnu/packages/dico.scm (dico)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it.
2016-07-28Merge remote-tracking branch 'origin/master' into core-updatesAndreas Enge
2016-07-28gnu: mysql: Update to 5.7.13 [fixes CVE-2016-{3477,3521,3615,5440}].Leo Famulari
* gnu/packages/patches/mysql-fix-failing-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/databases.scm (mysql): Update to 5.7.13.
2016-07-27gnu: calibre: Update to 2.63.0.Alex Griffin
* gnu/packages/ebook.scm (calibre): Update to 2.63.0. [inputs]: Remove unnecessary imagemagick dependency. [phases]: Use modify-phases. * gnu/packages/patches/calibre-drop-unrar.patch: Update for new version. Signed-off-by: Roel Janssen <roel@gnu.org>
2016-07-25Merge remote-tracking branch 'origin/master' into core-updatesAndreas Enge
2016-07-24gnu: openssh: Fix CVE-2016-6210.Efraim Flashner
* gnu/packages/ssh.scm (openssh)[source]: Add patches openssh-CVE-2016-6210-1.patch, openssh-CVE-2016-6210-2.patch, openssh-CVE-2016-6210-3.patch. * gnu/packages/patches/openssh-CVE-2016-6210-1.patch: New file. * gnu/packages/patches/openssh-CVE-2016-6210-2.patch: New file. * gnu/packages/patches/openssh-CVE-2016-6210-3.patch: New file. * gnu/local.mk (dist_patch_DATA): Register them.
2016-07-20Merge branch 'master' into core-updatesLudovic Courtès
2016-07-18gnu: llvm: Update to 3.8.1.Eric Bavier
* gnu/packages/llvm.scm (llvm, clang-runtime, clang): Update to 3.8.1. (llvm-3.7, clang-runtime-3.7, clang-3.7): New variables. (clang-runtime-from-llvm)[arguments]: Disable tests, which were not being run for previous versions anyhow but now fail hard. (clang-from-llvm): Add #:patches keyword argument. * gnu/packages/patches/clang-3.8-libc-search-path.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. Co-authored-by: Dennis Mungai <dmngaie@gmail.scm>
2016-07-18Revert "gnu: gnutls: Fix test failure."Leo Famulari
This reverts commit 1d14bf9f5ff43ff9097f1c5e1e2d37528eb74971.
2016-07-18gnu: gd: Fix failing test on i686.Mark H Weaver
* gnu/packages/patches/gd-fix-test-on-i686.patch: New file. * gnu/local.mk (dist_PATCH_DATA): Add it. * gnu/packages/gd.scm (gd)[source]: Add the patch.
2016-07-18gnu: gnutls: Fix test failure.Leo Famulari
* gnu/packages/patches/gnutls-fix-stale-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/tls.scm (gnutls)[replacement]: New field. (gnutls/fixed): New variable.
2016-07-16gnu: gd: Fix CVE-2016-{5766,6128,6132,6214}.Leo Famulari
* gnu/packages/patches/gd-CVE-2016-5766.patch, gnu/packages/patches/gd-CVE-2016-6128.patch, gnu/packages/patches/gd-CVE-2016-6132.patch, gnu/packages/patches/gd-CVE-2016-6214.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/gd.scm (gd): Use patches.
2016-07-10gnu: libmtp: Update to 1.1.11.Ricardo Wurmus
* gnu/packages/patches/libmtp-devices.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove patch. * gnu/packages/libusb.scm (libmtp): Update to 1.1.11.
2016-07-09gnu: Add python-dendropy.Ben Woodcroft
* gnu/packages/bioinformatics.scm (python-dendropy, python2-dendropy): New variables. * gnu/packages/patches/python-dendropy-exclude-failing-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2016-07-06gnu: sudo: Update to 1.8.17p1.Efraim Flashner
* gnu/packages/admin.scm (sudo): Update to 1.8.17p1. [source]: Remove patch. * gnu/packages/patches/sudo-CVE-2015-5602.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
2016-07-03gnu: ninja: Update to 1.7.1.Efraim Flashner
* gnu/packages/ninja.scm (ninja): Update to 1.7.1. * gnu/packages/patches/ninja-tests.patch: Update patch.
2016-07-03gnu: openimageio: Update to 1.6.15.Efraim Flashner
* gnu/packages/graphics.scm (openimageio): Update to 1.6.15. [source]: Remove patch. * gnu/packages/patches/openimageio-boost-1.60.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
2016-07-02gnu: gimp: Fix CVE-2016-4994.Leo Famulari
* gnu/packages/patches/gimp-CVE-2016-4994.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gimp.scm (gimp): Use it.
2016-06-29gnu: avrdude: Use libusb-compat.Ricardo Wurmus
* gnu/packages/patches/avrdude-fix-libusb.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/flashing-tools.scm (avrdude)[source]: Remove patch. [inputs]: Replace "libusb" with "libusb-compat".
2016-06-27gnu: Add khmer.Ben Woodcroft
* gnu/packages/bioinformatics.scm (khmer): New variable. * gnu/packages/patches/khmer-use-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2016-06-27Merge branch 'master' into core-updatesLudovic Courtès
2016-06-26daemon: Rename 'NIX_CONF_DIR' to 'GUIX_CONFIGURATION_DIRECTORY'.David Craven
Partly fixes <http://bugs.gnu.org/22459>. Reported by Jeff Mickey <j@codemac.net> and David Craven <david@craven.ch>. * nix/libstore/globals.cc (Settings::processEnvironment()): Change 'NIX_CONF_DIR' to 'GUIX_CONFIGURATION_DIRECTORY'. * nix/local.mk (libstore_a_CPPFLAGS): Likewise. * guix/config.scm.in (%config-directory): Likewise. * build-aux/test-env.in: Likewise. * gnu/packages/patches/hydra-automake-1.15.patch: Likewise. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-06-22gnu: beets: Update to 1.3.18.Leo Famulari
* gnu/packages/patches/beets-image-test-failure.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/music.scm (beets): Update to 1.3.18. [source]: Use patch.
2016-06-21gnu: nasm: Make build bit-reproducible.Jan Nieuwenhuizen
* gnu/packages/patches/nasm-no-ps-pdf.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/assembly.scm (nasm): Use it. Remove ghostscript, do not build PS or PDF docs. Makes build bit-reproducible. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-06-21gnu: Add ruby-puma.Ben Woodcroft
gnu/packages/ruby.scm (ruby-puma): New variable. gnu/packages/patches/ruby-puma-ignore-broken-test.patch: New file. gnu/local.mk (dist_patch_DATA): Add it.
2016-06-17Merge branch 'master' into core-updatesLudovic Courtès
2016-06-16gnu: Add awesome.Carlo Zancanaro
* gnu/packages/wm.scm (awesome): New variable. * gnu/packages/patches/awesome-reproducible-png.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-06-15gnu: openssl: Fix CVE-2016-2177 and CVE-2016-2178.Leo Famulari
* gnu/packages/patches/openssl-CVE-2016-2177.patch, gnu/packages/patches/openssl-CVE-2016-2178.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/tls.scm (openssl/fixed): Use them.
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