Age | Commit message (Collapse) | Author |
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* gnu/packages/python.scm (python-pygit2, python2-pygit2): Update to 0.26.4.
[source]: Remove 'python-pygit2-disable-network-tests.patch'.
* gnu/packages/patches/python-pygit2-disable-network-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
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* gnu/packages/python.scm (python-pkgconfig)[arguments]: Replace 'check' phase.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/python.scm (python-pkgconfig): Update to 1.3.1.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/python.scm (python-rpy2): Update to 2.9.4.
[arguments]: Remove obsolete phases and substitute INVOKE for SYSTEM*
now that we can.
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* gnu/packages/python.scm (python-rpy2)[home-page]: Update URI.
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* gnu/packages/python.scm (python-py)[home-page]: Use HTTPS.
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* gnu/packages/python.scm (python-cython)[arguments]: On armhf-linux, add
phase to disable two tests.
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* gnu/packages/python.scm (python-argparse-manpage): New variable.
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* gnu/packages/python.scm (python-txamqp): Update to 0.8.2.
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Also add a comment about 1.7.1. This doesn't warrant a changelog entry,
so you never read this.
* gnu/packages/python.scm (python-pep8)[home-page]: Use HTTPS.
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* gnu/packages/python.scm (python-scipy)[arguments]: Only run the default test
suite. The full test suite is too expensive and brittle.
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It was first added in 02f8f804f0242df885311715412a1e3ee5436f3b, then again in
2dd12924cf4a30a96262b6d392fcde58c9f10d4b.
* gnu/packages/python.scm (python-pafy): Remove duplicated package definition.
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* gnu/packages/python.scm (snakemake-4): New variable.
* gnu/packages/bioinformatics.scm (pigx-bsseq, pigx-rnaseq, pigx-scrnaseq,
pigx-chipseq)[inputs]: Use it.
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* gnu/packages/python.scm (snakemake)[propagated-inputs]: Add python-datrie,
python-docutils, python-jinja2, python-jsonschema, and python-networkx.
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* gnu/packages/python.scm (python-datrie): New variable.
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* gnu/packages/python.scm (snakemake): Update to 5.2.0.
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* gnu/packages/python.scm (python-cython, python2-cython): Update to 0.28.4.
[arguments]: Use invoke.
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Fixes <https://bugs.gnu.org/32170>.
* gnu/packages/patches/python-cairocffi-dlopen-path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-cairocffi)[inputs]: Add glib, gtk+, pango.
[native-inputs]: Add python-pytest.
[arguments]: Enable tests.
[arguments]<#:phases>[patch-paths]: New phase.
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* gnu/packages/python.scm (python-pyasn1-modules, python2-pyasn1-modules):
Update to 0.2.2.
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* gnu/packages/python.scm (python-pyasn1, python2-pyasn1): Update to 0.4.3.
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* gnu/packages/python.scm (python-xenon): Update to 0.5.4.
[arguments]: Remove part of custom 'patch-test-requirements phase.
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* gnu/packages/python.scm (python-h5py): Update to 2.8.0.
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* gnu/packages/python.scm (python-pyyaml): Update to 3.13.
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* gnu/packages/python.scm (python-commandlines): New variable.
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* gnu/packages/python.scm (python-rst.linker): Update to 1.10.
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* gnu/packages/python.scm (python-xopen): Update to 0.3.3.
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* gnu/packages/python.scm (python2-xopen)[propagated-inputs]: Add
python2-bz2file.
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* gnu/packages/python.scm (python-parso): Update to 0.2.1.
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* gnu/packages/python.scm (python-pandas): Update to 0.23.1.
[arguments]: Drop new S3 test.
[native-inputs]: Add PYTHON-BEAUTIFULSOUP4 and PYTHON-HTML5LIB.
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* gnu/packages/python.scm (python-numpy): Update to 1.14.5.
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* gnu/packages/python.scm (python-pathpy): Update to 11.0.1.
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* gnu/packages/python.scm (python-send2trash, python2-send2trash): New public
variables.
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* gnu/packages/python.scm (python-click-log): Update to 0.3.2.
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* gnu/packages/python.scm (python-dns-lexicon, python2-dns-lexicon): New
variables.
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* gnu/packages/python.scm (python-pynamecheap, python2-pynamecheap): New
variables.
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* gnu/packages/python.scm (python-tldextract, python2-tldextract): New
variables.
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* gnu/packages/python.scm (python-requests-file, python2-requests-file): New
variables.
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* gnu/packages/python.scm (python-llfuse, python2-llfuse): Update to 1.3.3.
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* gnu/packages/python.scm (python-urwid, python2-urwird): Update to 2.0.1.
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* gnu/packages/python.scm (python2-called-python): New variable.
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