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Conflicts:
gnu/local.mk
gnu/packages/algebra.scm
gnu/packages/bioinformatics.scm
gnu/packages/curl.scm
gnu/packages/docbook.scm
gnu/packages/emacs-xyz.scm
gnu/packages/maths.scm
gnu/packages/plotutils.scm
gnu/packages/python-web.scm
gnu/packages/python-xyz.scm
gnu/packages/radio.scm
gnu/packages/readline.scm
gnu/packages/tls.scm
gnu/packages/xml.scm
gnu/packages/xorg.scm
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* gnu/packages/pep.scm (fdik-libetpan): Update to current development
version. [source]: Switch to pep.foundation.
(pep-engine): Update to 2.1.34. [source]: Switch to new git repo.
[arguments]<make-flags>: Enable release-build.
[inputs]: Use normal sequoia.
* gnu/packages/sequoia.scm (sequoia4pEp): Remove variable.
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These packages use a different source/version from the inherited package, and
thus should not inherit replacements.
* gnu/packages/check.scm (googletest-1.8, python-pytest-runner-2): Use record
inheritance instead of PACKAGE/INHERIT.
* gnu/packages/crates-io.scm (rust-bindgen-0.49, rust-bytes-0.4,
rust-colored-1.9.1, rust-difference-1, rust-docopt-0.8, rust-html5ever-0.23,
rust-http-0.1, rust-http-body-0.1, rust-loom-0.2, rust-loom-0.1,
rust-pulldown-cmark-0.0.8, rust-ring-0.13, rust-rustls-0.12, rust-sct-0.3,
rust-term-0.2, rust-untrusted-0.6, rust-webpki-0.18, rust-webpki-roots-0.17,
rust-webpki-roots-0.14): Likewise.
* gnu/packages/emacs.scm (emacs-next, emacs-next-pgtk, guile-emacs): Likewise.
* gnu/packages/guile.scm (guile-2.2.4): Likewise.
* gnu/packages/maths.scm (hdf5-1.10, hdf5-1.12): Likewise.
* gnu/packages/protobuf.scm (protobuf-3.6, protobuf-3.5, python-protobuf-3.6):
Likewise.
* gnu/packages/python-web.scm (python2-html2text): Likewise.
* gnu/packages/python-xyz.scm (python-pygments/fixed, python2-numpy,
python2-urwid, python2-markdown, python2-fonttools): Likewise.
* gnu/packages/racket.scm (racket): Likewise.
* gnu/packages/sequoia.scm (sequoia4pEp): Likewise.
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Conflicts:
gnu/local.mk
gnu/packages/bioinformatics.scm
gnu/packages/django.scm
gnu/packages/gtk.scm
gnu/packages/llvm.scm
gnu/packages/python-web.scm
gnu/packages/python.scm
gnu/packages/tex.scm
guix/build-system/asdf.scm
guix/build/emacs-build-system.scm
guix/profiles.scm
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* gnu/packages/sequoia.scm (sequoia): Update to 1.1.0. [arguments]: Remove
phase "package", add phases "fix-rand-dependency" and "fix-permissions".
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* gnu/packages/sequoia.scm (sequoia4pEp)[arguments]: Override inherited
cargo-inputs, cargo-development-inputs. Replace inherited 'unpin-deps
phase.
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Don't have cross module package inheritance.
* gnu/packages/pep.scm (sequoia4pEp): Move to ...
* gnu/packages/sequoia.scm (sequoia4pEp): ... here. Hide package.
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* gnu/packages/sequoia.scm (sequoia)[arguments]: Use the latest (and only)
rust.
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* gnu/packages/crates-io.scm (rust-dirs-2): Drop minor version from name.
(rust-dirs-1.0):
(rust-term-0.6):
* gnu/packages/rust-apps.scm (fd):
* gnu/packages/sequoia.scm (sequoia):
* gnu/packages/web.scm (castor): Apply renaming.
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* gnu/packages/sequoia.scm (sequoia): Update to 1.0.0.
[arguments]{cargo-inputs}: Add rust-eax, rust-futures-util,
rust-sha1collisiondetection, rust-socket2. Update rust-capnp, rust-capnp-rpc,
rust-capnpc, rust-futures, rust-http,rust-hyper rust-hyper-tls, rust-tokio,
rust-win-crypto-ng.
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* gnu/packages/crates-io.scm (rust-anyhow-1): Drop minor version from name.
(rust-codespan-reporting-0.9)
(rust-swc-1)
(rust-syn-1)
(rust-thiserror-1)
(rust-wasm-bindgen-webidl-0.2)
(rust-svd-parser-0.9): Adjust accordingly.
* gnu/packages/crates-gtk.scm (rust-glib-macros-0.10): Same.
* gnu/packages/rust-apps.scm (fd): Same.
* gnu/packages/sequoia.scm (sequoia): Same.
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* gnu/packages/sequoia.scm (sequoia): Update to 0.20.0. [cargo-inputs,
cargo-development-inputs] Update dependencies. [phases]{unpin-deps}: Adjust
path of file to substitute. {adjust-prefix} Rename to {fix-environment} and
set another envormnet variable. {keep-SOURCE_DATE_EPOCH}: New phase.
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* gnu/packages/crates-io.scm (rust-flate2-1.0): Rename to rust-flate2-1.
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* gnu/packages/crates-io.scm (rust-percent-encoding-2.1): Rename to
rust-percent-encoding-2.
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* gnu/packages/crates-io.scm (rust-url-2.1): Rename to rust-url-2.
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* gnu/packages/crates-io.scm (rust-thiserror-1.0): Rename to rust-thiserror-1.
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* gnu/packages/crates-io.scm (rust-proc-macro2-1.0): Rename to...
(rust-proc-macro2-1): ...this.
* gnu/packages/rust-apps.scm (rust-cbindgen): Fixup dependency list.
* gnu/packages/sequoia.scm (sequoia): Likewise.
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* gnu/packages/sequoia.scm (sequoia): Update to 0.17.0.
[cargo-inputs]: Add rust-structopt-0.3.
[phases](unpin-deps): New phase.
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* gnu/packages/sequoia.scm (sequoia)[arguments]: Move unquote next to
the expression it applies to.
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* gnu/packages/crates-io.scm (rust-regex-1.3): Rename to rust-regex-1.
(rust-ansi-term-0.12, rust-bindgen-0.52, rust-bindgen-0.51,
rust-bindgen-0.50, rust-bindgen-0.37, rust-bindgen-0.49, rust-clap-2,
rust-compiletest-rs-0.3, rust-console-0.9, rust-console-0.7,
rust-docopt-1.1, rust-env-logger-0.7, rust-env-logger-0.6,
rust-env-logger-0.5, rust-gimli-0.18, rust-globset-0.4,
rust-grep-cli-0.1, rust-grep-matcher-0.1, rust-grep-regex-0.1,
rust-grep-searcher-0.1, rust-ignore-0.4, rust-lalrpop-0.17,
rust-lalrpop-util-0.17, rust-locale-config-0.3, rust-localeconfig-0.2,
rust-nom-5, rust-nom-4.2, rust-once-cell-1.2, rust-proptest-0.9,
rust-proptest-0.8, rust-pulldown-cmark-0.4, rust-regex-automata-0.1,
rust-rusqlite-0.19, rust-scan-fmt-0.2, rust-syn-1.0, rust-syn-0.15,
rust-ucd-parse-0.1, rust-version-sync-0.8) [arguments]: Adjust accordingly.
* gnu/packages/gnome.scm (librsvg-next)[arguments]: Same.
* gnu/packages/rust-apps.scm (fd, ripgrep, tokei, rust-cargo-c)
[arguments]: Same.
* gnu/packages/sequoia.scm (sequoia)[arguments]: Same.
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* gnu/packages/crates-io.scm (rust-tempfile-3.1): Rename to ...
(rust-tempfile-3): .. this.
(rust-cairo-rs-0.8, rust-cairo-rs-0.7, rust-cc-1.0,
rust-compiletest-rs-0.3, rust-filetime-0.2, rust-gdk-pixbuf-sys-0.9,
rust-gio-sys-0.9, rust-git2-0.11, rust-glib-0.9, rust-glib-0.8,
rust-glib-sys-0.9, rust-gobject-sys-0.9, rust-handlebars-2.0,
rust-lscolors-0.6, rust-native-tls-0.2, rust-nix-0.15, rust-nix-0.14,
rust-no-panic-0.1, rust-pango-sys-0.9, rust-pangocairo-0.10,
rust-proptest-0.9, rust-proptest-0.8, rust-rustdoc-stripper-0.1,
rust-rustls-0.16, rust-rusty-fork-0.2, rust-sourcefile-0.1,
rust-tiff-0.2, rust-tokio-0.2, rust-tokio-fs-0.1, rust-tokio-uds-0.2,
rust-wayland-client-0.23, rust-wayland-client-0.21, rust-xattr-0.2)
[arguments]: Adjust accordingly.
* gnu/packages/rust-apps.scm (rust-cbindgen, tokei)[arguments]: Same.
* gnu/packages/sequoia.scm (sequoia)[arguments]: Same.
* gnu/packages/terminals.scm (alacritty)[arguments]: Same.
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The pkgconfig files defines the wrong prefix: It is the build directory, while
it should be the installation prefix. This is caused by Makefiles replacing
`PREFIX` by `$(shell pwd)`.
See <https://gitlab.com/sequoia-pgp/sequoia/-/issues/502> for details.
* gnu/packages/sequoia.scm (sequoia)[fix-pkgconfig-file-substitutes]: New
phase.
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* gnu/packages/sequoia.scm: New file.
* gnu/local.mk: Add it.
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