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2018-03-14Merge branch 'master' into core-updatesRicardo Wurmus
2018-03-14gnu: geomyidae: Update to 0.31.Tobias Geerinckx-Rice
* gnu/packages/web.scm (geomyidae): Update to 0.31.
2018-03-13gnu: tidy: Declare a source file-name.Efraim Flashner
* gnu/packages/web.scm (tidy)[source]: Declare a source file-name.
2018-03-13gnu: mod-wsgi: Declare a source file-name.Efraim Flashner
* gnu/packages/web.scm (mod-wsgi)[source]: Declare a source file-name.
2018-03-11build-system/gnu: Add 'bootstrap' phase.Ludovic Courtès
This factorizes what has become a widespread idiom. * guix/build/gnu-build-system.scm (%bootstrap-scripts): New variable. (bootstrap): New procedure. (%standard-phases): Add it after 'unpack'. * guix/build/ant-build-system.scm (%standard-phases): Delete 'bootstrap. * guix/build/asdf-build-system.scm (%standard-phases/source) (%standard-phases): Likewise. * guix/build/cargo-build-system.scm (%standard-phases): Likewise. * guix/build/cmake-build-system.scm (%standard-phases): Likewise. * guix/build/dub-build-system.scm (%standard-phases): Likewise. * guix/build/emacs-build-system.scm (%standard-phases): Likewise. * guix/build/font-build-system.scm (%standard-phases): Likewise. * guix/build/go-build-system.scm (%standard-phases): Likewise. * guix/build/haskell-build-system.scm (%standard-phases): Likewise. * guix/build/minify-build-system.scm (%standard-phases): Likewise. * guix/build/ocaml-build-system.scm (%standard-phases): Likewise. * guix/build/perl-build-system.scm (%standard-phases): Likewise. * guix/build/python-build-system.scm (%standard-phases): Likewise. * guix/build/r-build-system.scm (%standard-phases): Likewise. * guix/build/ruby-build-system.scm (%standard-phases): Likewise. * guix/build/scons-build-system.scm (%standard-phases): Likewise. * guix/build/texlive-build-system.scm (%standard-phases): Likewise. * guix/build/waf-build-system.scm (%standard-phases): Likewise. * gnu/packages/audio.scm (faad2)[arguments]: Replace 'bootstrap. (soundtouch, cuetools, bluez-alsa): Remove 'arguments'. (cava)[arguments]: Replace 'bootstrap. * gnu/packages/backup.scm (rdup): Remove 'bootstrap. * gnu/packages/bioinformatics.scm (seek)[arguments]: Replace 'bootstrap. * gnu/packages/bioinformatics.scm (htslib-for-sambamba): Remove 'arguments'. * gnu/packages/ci.scm (hydra, cuirass): Remove 'bootstrap'. * gnu/packages/crypto.scm (libb2): Remove #:phases. * gnu/packages/databases.scm (guile-wiredtiger): Likewise. * gnu/packages/debug.scm (stress-make): Remove 'bootstrap'. * gnu/packages/documentation.scm (asciidoc): Likewise. * gnu/packages/fontutils.scm (libuninameslist): Remove 'arguments'. * gnu/packages/ftp.scm (weex): Remove 'arguments'. * gnu/packages/game-development.scm (ois): Remove 'arguments'. * gnu/packages/games.scm (pioneer): Remove 'bootstrap. * gnu/packages/gnome.scm (vte-ng, byzanz): Replace 'bootstrap. (arc-theme): Remove 'arguments'. (faba-icon-theme): Remove 'bootstrap. (arc-icon-theme): Remove 'arguments'. * gnu/packages/gnunet.scm (guile-gnunet): Likewise. * gnu/packages/gtk.scm (guile-rsvg): Likewise. * gnu/packages/guile.scm (mcron2): Remove 'bootstrap. (guile-bash): Remove #:phases. (guile-git): Remove 'bootstrap. (guile-syntax-highlight): Remove 'arguments'. (guile-sjson): Likewise. * gnu/packages/java.scm (classpath-devel): Remove 'bootstrap. * gnu/packages/kodi.scm (libdvdnav/kodi) (libdvdread/kodi, libdvdcss/kodi): Likewise. * gnu/packages/libreoffice.scm (hunspell): Remove 'arguments'. * gnu/packages/libusb.scm (hidapi): Likewise. * gnu/packages/linux.scm (bridge-utils): Rename 'bootstrap' to 'patch-stuff'; move it before 'bootstrap', without autoreconf invocation. (eudev): Rename 'bootstrap' to 'patch-file-names', without 'autogen.sh' invocation; move it before 'bootstrap. (gpm): Replace 'bootstrap'. (f2fs-tools): Remove 'arguments'. (rng-tools): Remove #:phases. * gnu/packages/messaging.scm (hexchat): Rename 'bootstrap' to 'copy-intltool-makefile'; remove "autoreconf" invocation and move before 'bootstrap'. (libmesode): Remove 'arguments'. (libstrophe): Likewise. * gnu/packages/microcom.scm (microcom): Likewise. * gnu/packages/networking.scm (libnet): Remove 'bootstrap. * gnu/packages/onc-rpc.scm (libnsl): Remove 'arguments'. * gnu/packages/package-management.scm (guix): Replace 'bootstrap. * gnu/packages/sawfish.scm (librep): Remove 'arguments'. * gnu/packages/version-control.scm (findnewest): Likewise. * gnu/packages/video.scm (liba52, handbrake, motion): Replace 'bootstrap. * gnu/packages/web.scm (fcgiwrap): Remove #:phases. (tidy): Replace 'bootstrap. (gumbo-parser): Remove #:phases. * gnu/packages/wget.scm (wget2): Replace 'bootstrap. * gnu/packages/wm.scm (i3lock-color): Remove #:phases. * gnu/packages/xdisorg.scm (xclip): Likewise. * gnu/packages/xml.scm (libxls): Replace 'bootstrap'. * gnu/packages/xorg.scm (xf86-video-freedreno) (xf86-video-intel): Remove #:phases. * gnu/packages/zile.scm (zile-on-guile): Replace 'bootstrap.
2018-03-08gnu: nghttp2: Use a fixed variant of tzdata for tests.Marius Bakke
* gnu/packages/web.scm (nghttp2)[native-inputs]: Replace TZDATA with TZDATA-FOR-TESTS.
2018-03-05gnu: perl-io-socket-ip: Update to 0.39.Tobias Geerinckx-Rice
* gnu/packages/web.scm (perl-io-socket-ip): Update to 0.39.
2018-03-05gnu: perl-www-mechanize: Update to 1.87.Tobias Geerinckx-Rice
* gnu/packages/web.scm (perl-www-mechanize): Update to 1.87.
2018-03-03gnu: r-httpuv: Update to 1.3.6.2.Ricardo Wurmus
* gnu/packages/web.scm (r-httpuv): Update to 1.3.6.2.
2018-03-02gnu: nghttp2: Update to 1.31.0.Tobias Geerinckx-Rice
* gnu/packages/web.scm (nghttp2): Update to 1.31.0.
2018-03-02gnu: libpsl: Update to 0.20.1.Tobias Geerinckx-Rice
* gnu/packages/web.scm (libpsl): Update to 0.20.1.
2018-03-01gnu: r-httpuv: Update to 1.3.6.1.Ricardo Wurmus
* gnu/packages/web.scm (r-httpuv): Update to 1.3.6.1.
2018-02-28gnu: r-httpuv: Update to 1.3.6.Tobias Geerinckx-Rice
* gnu/packages/web.scm (r-httpuv): Update to 1.3.6.
2018-02-26gnu: Add nghttp2.Tobias Geerinckx-Rice
* gnu/packages/web.scm (nghttp2): New public variable.
2018-02-26gnu: libpsl: Update to 0.20.0.Tobias Geerinckx-Rice
* gnu/packages/web.scm (libpsl): Update to 0.20.0.
2018-02-26gnu: perl-net-smtp-ssl: Update to 1.04.Tobias Geerinckx-Rice
* gnu/packages/web.scm (perl-net-smtp-ssl): Update to 1.04.
2018-02-26gnu: perl-http-server-simple: Update to 0.52.Tobias Geerinckx-Rice
* gnu/packages/web.scm (perl-http-server-simple): Update to 0.52.
2018-02-23gnu: java-tomcat: Update to 8.5.28 [security fixes].Ricardo Wurmus
Fixes CVE-2018-1304. * gnu/packages/web.scm (java-tomcat): Update to 8.5.28.
2018-02-20gnu: nginx: Update to 1.13.9.Marius Bakke
* gnu/packages/web.scm (nginx): Update to 1.13.9.
2018-02-19gnu: xinetd: Don't hard-code tarball version.Tobias Geerinckx-Rice
* gnu/packages/web.scm (xinetd)[source]: Construct URI using VERSION.
2018-02-16Merge branch 'master' into core-updatesMark H Weaver
2018-02-14gnu: Add cat-avatar-generator.Julien Lepiller
* gnu/packages/web.scm (cat-avatar-generator): New variable.
2018-02-13Merge branch 'master' into core-updatesMark H Weaver
2018-02-13gnu: r-htmltable: Update to 1.11.2.Ricardo Wurmus
* gnu/packages/web.scm (r-htmltable): Update to 1.11.2. [propagated-inputs]: Remove r-dplyr and r-tidyr.
2018-02-13gnu: r-htmlwidgets: Update to 1.0.Ricardo Wurmus
* gnu/packages/web.scm (r-htmlwidgets): Update to 1.0.
2018-02-12gnu: Add r-shinydashboard.Ricardo Wurmus
* gnu/packages/web.scm (r-shinydashboard): New variable. Co-authored-by: Raoul Jean Pierre Bonnal <ilpuccio.febo@gmail.com>
2018-02-11Merge branch 'master' into core-updatesMark H Weaver
2018-02-10gnu: Add java-jsoup.Julien Lepiller
* gnu/packages/web.scm (java-jsoup): New variable.
2018-02-09Merge branch 'master' into core-updatesMark H Weaver
2018-02-04gnu: nginx-documentation: Update to 2018-01-22-2100-cfb7bd672d77.Tobias Geerinckx-Rice
* gnu/packages/web.scm (nginx-documentation): Update to 2018-01-22-2100-cfb7bd672d77.
2018-02-01Merge branch 'master' into core-updatesMarius Bakke
2018-01-30gnu: jansson: Update to 2.10.Tobias Geerinckx-Rice
* gnu/packages/web.scm (jansson): Update to 2.10.
2018-01-30gnu: nginx: Update to 1.13.8.Tobias Geerinckx-Rice
* gnu/packages/web.scm (nginx): Update to 1.13.8.
2018-01-30gnu: nginx: Fix typo in description.Tobias Geerinckx-Rice
* gnu/packages/web.scm (nginx)[description]: Add hyphen.
2018-01-30gnu: nginx, nginx-documentation: End phases with #t.Tobias Geerinckx-Rice
* gnu/packages/web.scm (nginx, nginx-documentation)[arguments]: End phases with #t. Substitute INVOKE for SYSTEM*.
2018-01-30gnu: uhttpmock: Update to 0.5.1.Tobias Geerinckx-Rice
* gnu/packages/web.scm (uhttpmock): Update to 0.5.1.
2018-01-30gnu: uwsgi: Update to 2.0.15.Tobias Geerinckx-Rice
* gnu/packages/web.scm (uwsgi): Update to 2.0.15.
2018-01-30gnu: stunnel: Update to 5.44.Tobias Geerinckx-Rice
* gnu/packages/web.scm (stunnel): Update to 5.44.
2018-01-30gnu: hiawatha: Update to 10.7.Tobias Geerinckx-Rice
* gnu/packages/web.scm (hiawatha): Update to 10.7.
2018-01-04Merge branch 'master' into core-updatesMark H Weaver
2018-01-04gnu: surfraw: Point to the correct Perl executable.Mark Meyer
* gnu/packages/web.scm (surfraw)[arguments]: Hardcode the path to Perl in a 'patch-perl' phase. Signed-off-by: Leo Famulari <leo@famulari.name>
2018-01-04gnu: json-c: Update to 0.13.Tobias Geerinckx-Rice
* gnu/packages/web.scm (json-c): Update to 0.13. [description]: Add new resolution. (json-c-0.12): New public variable. (hubbub)[inputs]: Use it. * gnu/packages/syndication.scm (newsbeuter)[inputs]: Likewise.
2018-01-03Merge branch 'master' into core-updatesLeo Famulari
2018-01-03gnu: httpd: Update to 2.4.29.Leo Famulari
* gnu/packages/web.scm (httpd): Update to 2.4.29. [source]: Remove patch. * gnu/packages/patches/httpd-CVE-2017-9798.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2017-12-31Merge remote-tracking branch 'origin/master' into core-updatesEfraim Flashner
2017-12-27gnu: nginx-documentation: Fix typo in synopsis.Tobias Geerinckx-Rice
* gnu/packages/web.scm (nginx-documentation)[synopis]: Add missing article.
2017-12-24gnu, doc: Use HTTPS for cran.r-project.org home pages.Tobias Geerinckx-Rice
* gnu/packages/bioinformatics.scm (r-sparql, r-acsnminer, r-gkmsvm) (r-maldiquant, r-gprofiler)[home-page]: Use HTTPS. * gnu/packages/cran.scm (r-colorspace, r-auc, r-calibrate, r-shape) (r-compare, r-proxy, r-sp, r-rmtstat, r-lmtest, r-inline, r-bbmle) (r-lpsolve, r-energy, r-suppdists, r-ksamples, r-cvst, r-drr, r-prodlim) (r-ddalpha, r-rcpproll, r-ipred, r-psych, r-truncnorm, r-rsolnp, r-laeken) (r-vcd, r-ica, r-scatterplot3d)[home-page]: Likewise. * gnu/packages/machine-learning.scm (r-adaptivesparsity, r-kernlab) [home-page]: Likewise. * gnu/packages/maths.scm (r-quadprog, r-pracma)[home-page]: Likewise. * gnu/packages/statistics.scm (r-boot, r-cluster, r-codetools, r-foreign) (r-kernsmooth, r-nlme, r-mgcv, r-rpart, r-dichromat, r-estimability) (r-pheatmap, r-labeling, r-magrittr, r-munsell, r-rcolorbrewer, r-sendmailr) (r-gdtools, r-acepack, r-formula, r-locfit, r-chron, r-coda, r-backports) (r-brew, r-commonmark, r-rstudioapi, r-plotrix, r-gridbase, r-bitops) (r-catools, r-xnomial, r-lambda-r, r-whoreadsthis, r-futile-options) (r-futile-logger, r-segmented, r-snow, r-iterators, r-foreach, r-doparallel) (r-domc, r-irlba, r-registry, r-e1071, r-bigmemory-sri, r-r-methodss3) (r-tidyselect, r-base64, r-runit, r-sfsmisc, r-gtools, r-gdata, r-gplots) (r-ztable, r-vipor, r-sourcetools, r-statmod, r-compquadform, r-mixtools) (r-fastica, r-diptest, r-modeltools, r-flexmix, r-deoptimr, r-pcapp) (r-rrcov, r-fit-models, r-robust, r-trimcluster, r-fpc, r-fnn) (r-modelmetrics, r-nloptr, r-lme4, r-tclust, r-lubridate)[home-page]: Likewise. * gnu/packages/web.scm (r-htmltools, r-hwriter, r-rjson, r-rook)[home-page]: Likewise. * doc/guix.texi (Invoking guix import, Invoking guix refresh): Likewise.
2017-12-23gnu: perl-io-socket-ip: Update to 0.38.Tobias Geerinckx-Rice
* gnu/packages/web.scm (perl-io-socket-ip): Update to 0.38.
2017-12-21Merge branch 'master' into core-updatesLeo Famulari
2017-12-19gnu: r-htmltable: Update to 1.11.0.Ricardo Wurmus
* gnu/packages/web.scm (r-htmltable): Update to 1.11.0. [propagated-inputs]: Add r-dplyr, r-htmltools, r-rstudioapi, and r-tidyr.
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