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2019-10-27gnu: r-biocmanager: Update to 1.30.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-biocmanager): Update to 1.30.9.
2019-10-27gnu: r-ncdf4: Update to 1.17.Ricardo Wurmus
* gnu/packages/cran.scm (r-ncdf4): Update to 1.17.
2019-10-27gnu: r-performance: Update to 0.4.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-performance): Update to 0.4.0.
2019-10-27gnu: r-bayestestr: Update to 0.4.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-bayestestr): Update to 0.4.0.
2019-10-27gnu: r-emmeans: Update to 1.4.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-emmeans): Update to 1.4.2.
2019-10-27gnu: r-slam: Update to 0.1-46.Ricardo Wurmus
* gnu/packages/cran.scm (r-slam): Update to 0.1-46.
2019-10-27gnu: r-doby: Update to 4.6-3.Ricardo Wurmus
* gnu/packages/cran.scm (r-doby): Update to 4.6-3. [propagated-inputs]: Add r-broom, r-deriv, r-pbkrtest, and r-tibble.
2019-10-27gnu: r-jomo: Update to 2.6-10.Ricardo Wurmus
* gnu/packages/cran.scm (r-jomo): Update to 2.6-10.
2019-10-27gnu: r-ddalpha: Update to 1.3.10.Ricardo Wurmus
* gnu/packages/cran.scm (r-ddalpha): Update to 1.3.10.
2019-10-27gnu: Add r-sets.Ricardo Wurmus
* gnu/packages/cran.scm (r-sets): New variable.
2019-10-27gnu: Add r-deriv.Ricardo Wurmus
* gnu/packages/cran.scm (r-deriv): New variable.
2019-10-27gnu: Add libu2f-server.Ricardo Wurmus
* gnu/packages/security-token.scm (libu2f-server): New variable.
2019-10-27gnu: po4a: Update to 0.57.Tobias Geerinckx-Rice
* gnu/packages/gettext.scm (po4a): Update to 0.57.
2019-10-27gnu: libssh: Update to 0.9.1.Tobias Geerinckx-Rice
* gnu/packages/ssh.scm (libssh): Update to 0.9.1.
2019-10-27gnu: wireguard: Update to 0.0.20191012.Tobias Geerinckx-Rice
* gnu/packages/vpn.scm (wireguard): Update to 0.0.20191012.
2019-10-27gnu: lollypop: Wrap with required path variables.Tobias Geerinckx-Rice
Fixes <https://issues.guix.info/issue/37937>. * gnu/packages/gnome.scm (lollypop)[arguments]: Rename ‘wrap’ phase to ‘wrap-python’ and add ‘wrap-glib-or-gtk’ phase. [inputs]: Add gsettings-desktop-schemas.
2019-10-27gnu: opensmtpd-next: Update to 6.6.0p1.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (opensmtpd-next): Update to 6.6.0p1. [inputs]: Replace openssl with libressl.
2019-10-27gnu: libressl: Don't use NAME in source URI.Tobias Geerinckx-Rice
* gnu/packages/tls.scm (libressl)[source]: Hard-code NAME.
2019-10-26gnu: icecat: Update to 68.2.0-guix0-preview1 [security fixes].Mark H Weaver
Fixes CVE-2019-11757, CVE-2019-11759, CVE-2019-11760, CVE-2019-11761, CVE-2019-11762, CVE-2019-11763, CVE-2019-11764, and CVE-2019-15903. Note: IceCat 68 has not yet been released by the IceCat project. This is a work-in-progress, and does not currently meet the privacy-respecting standards of the IceCat project. * gnu/packages/patches/icecat-default-search-ddg.patch, gnu/packages/patches/icecat-disable-sync.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/gnuzilla.scm (%icecat-version): Update. (mozilla-compare-locales, all-mozilla-locales): New variables. (mozilla-locale): New procedure. (mozilla-locales): New macro. (icecat-source): Add code to populate the l10n directory. Remove the code that copied the l10n directory from an older IceCat source tarball. (icecat)[inputs]: Remove hunspell. [native-inputs]: Comment out previous Guix-specific patches for now. Use the newest rust, cargo, llvm, and clang. Add rust-cbindgen, node, nasm, python 3, icecat-default-search-ddg.patch and icecat-disable-sync.patch. [arguments]: In configure flags: remove "--disable-maintenance-service" and "--enable-system-hunspell", and comment out flags to use system libraries instead of bundled libraries for libevent, libogg, libvorbis, libvpx, harfbuzz, graphite2, and sqlite. Add srfi-34 and srfi-35 to modules. Delete fewer bundled libraries. Adapt the 'patch-source-shebangs' phase. Add a custom 'build' phase that tries the standard 'build' phase up to 5 times. In the 'wrap-program' phase, set MOZ_LEGACY_PROFILES=1 in the environment, and add 'pulseaudio' to the front of LD_LIBRARY_PATH. [description]: Add a warning that this is only a preview release. * gnu/packages/patches/icecat-makeicecat.patch: Adapt.
2019-10-26gnu: sbcl: Update to 1.5.8.Pierre Neidhardt
* gnu/packages/lisp.scm (sbcl): Update to 1.5.8.
2019-10-26gnu: git-annex: Update to 7.20191024.Tobias Geerinckx-Rice
* gnu/packages/haskell-apps.scm (git-annex): Update to 7.20191024.
2019-10-26gnu: man-db: Update to 2.9.0.Tobias Geerinckx-Rice
* gnu/packages/man.scm (man-db): Update to 2.9.0.
2019-10-26gnu: retroarch: Update to 1.7.9.2.Tobias Geerinckx-Rice
* gnu/packages/emulators.scm (retroarch): Update to 1.7.9.2.
2019-10-25gnu: neomutt: Update to 20191025.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (neomutt): Update to 20191025. [inputs]: Use libidn2 instead of libidn. [arguments]: Adjust #:configure-flags accordingly. Enable tests. Remove ‘fix-sasl-test’ phase.
2019-10-25gnu: neomutt: Don't use unstable tarball.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (neomutt)[source]: Use GIT-FETCH and GIT-FILE-NAME.
2019-10-25gnu: varnish: Update to 6.3.1 [security fixes].Tobias Geerinckx-Rice
Fixes <https://varnish-cache.org/security/VSV00004.html>. * gnu/packages/web.scm (varnish): Update to 6.3.1.
2019-10-25gnu: perl-net-dns-native: Update to 0.21.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-net-dns-native): Update to 0.21.
2019-10-25gnu: qbittorrent: Update to 4.1.8.Tobias Geerinckx-Rice
* gnu/packages/bittorrent.scm (qbittorrent): Update to 4.1.8.
2019-10-25gnu: rss-bridge: Update to 2019-09-12.Tobias Geerinckx-Rice
* gnu/packages/web.scm (rss-bridge): Update to 2019-09-12.
2019-10-25gnu: profanity: Correct indentation.Tanguy Le Carrour
* gnu/packages/messaging.scm (profanity): Correct indentation. Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
2019-10-25gnu: profanity: Update to 0.7.1.Tanguy Le Carrour
* gnu/packages/messaging.scm (profanity): Update to 0.7.1, [uri]: update source URL to the one provided on the website. Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
2019-10-25gnu: Add ddcci-driver-linux.Brice Waegeneire
* gnu/packages/linux.scm (ddcci-driver-linux): Add variable. Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
2019-10-25gnu: Add ruby-wayback-machine-downloader.Diego Nicola Barbato
* gnu/packages/ruby.scm (ruby-wayback-machine-downloader): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-10-25gnu: guile-studio: Update to 0.0.1-3.98fbbbd.Ricardo Wurmus
* gnu/packages/guile-xyz.scm (guile-studio): Update to 0.0.1-3.98fbbbd. [arguments]: Add make-flags; remove custom build phase. [native-inputs]: Add texinfo.
2019-10-25gnu: git-annex: Update to 7.20191017.Tobias Geerinckx-Rice
* gnu/packages/haskell-apps.scm (git-annex): Update to 7.20191017.
2019-10-25gnu: youtube-dl: Update to 2019.10.22.Tobias Geerinckx-Rice
* gnu/packages/video.scm (youtube-dl): Update to 2019.10.22.
2019-10-25gnu: asunder: Update to 2.9.5.Tobias Geerinckx-Rice
* gnu/packages/cdrom.scm (asunder): Update to 2.9.5.
2019-10-25gnu: giac: Update to 1.5.0-69.Tobias Geerinckx-Rice
* gnu/packages/algebra.scm (giac): Update to 1.5.0-69.
2019-10-24gnu: packagekit: Update to 1.1.12.Tobias Geerinckx-Rice
* gnu/packages/freedesktop.scm (packagekit): Update to 1.1.12.
2019-10-24gnu: libblockdev: Update to 2.23.Tobias Geerinckx-Rice
* gnu/packages/disk.scm (libblockdev): Update to 2.23.
2019-10-24gnu: psmisc: Update source URI.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (psmisc)[source]: Update URI.
2019-10-24gnu: btrfs-progs: Update to 5.3.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (btrfs-progs): Update to 5.3.
2019-10-24gnu: util-linux: Don't use NAME in source URI.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (util-linux)[source]: Hard-code NAME.
2019-10-24gnu: tome4: Update to 1.6.0.Oleg Pykhalov
* gnu/packages/games.scm (tome4): Update to 1.6.0.
2019-10-24gnu: php: Update to 7.3.11.Julien Lepiller
* gnu/packages/php.scm (php): Update to 7.3.11.
2019-10-24gnu: psmisc: Update hash.Tobias Geerinckx-Rice
Apart from translation (po/*) updates, the following code changes were made in-place: <https://issues.guix.gnu.org/issue/37905>. * gnu/packages/linux.scm (psmisc)[source]: Update hash.
2019-10-24gnu: emacs-ag: Update to 0.48.Clément Lassieur
* gnu/packages/emacs-xyz.scm (emacs-ag): Update to 0.48.
2019-10-24gnu: lynx: Ignore CVE-2016-9179.Efraim Flashner
This was fixed in a dev release two years prior to our packaged version. * gnu/packages/web-browsers.scm (lynx)[properties]: New field.
2019-10-24gnu: python-ipykernel: Update to 5.1.3.Tobias Geerinckx-Rice
* gnu/packages/python-xyz.scm (python-ipykernel): Update to 5.1.3. [native-inputs]: Add python-flaky.
2019-10-24gnu: perl-test-mockmodule: Update to 0.171.0.Tobias Geerinckx-Rice
* gnu/packages/perl-check.scm (perl-test-mockmodule): Update to 0.171.0.
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