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2017-08-11gnu: ruby-cucumber-core: Update to 2.0.0.Tobias Geerinckx-Rice
* gnu/packages/ruby.scm (ruby-cucumber-core): Update to 2.0.0.
2017-08-11gnu: ruby-pg: Update to 0.21.0.Tobias Geerinckx-Rice
* gnu/packages/ruby.scm (ruby-pg): Update to 0.21.0.
2017-08-11gnu: ruby-slop: Update to 4.5.0.Tobias Geerinckx-Rice
* gnu/packages/ruby.scm (ruby-slop): Update to 4.5.0.
2017-08-10gnu: openjpeg: Update to 2.2.0 [security fixes].Marius Bakke
In addition to the patches we already had (which are not mentioned in the ChangeLog, but verified by following their respective GitHub issues) this release also fixes CVE-2016-9112, CVE-2016-5139, CVE-2016-5152, CVE-2016-5158, CVE-2016-5159, CVE-2016-1626 and CVE-2016-1628. See <https://github.com/uclouvain/openjpeg/blob/v2.2.0/CHANGELOG.md> for details. * gnu/packages/patches/openjpeg-CVE-2016-9572-CVE-2016-9573.patch, gnu/packages/patches/openjpeg-CVE-2016-9850-CVE-2016-9851.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them. * gnu/packages/image.scm (openjpeg): Update to 2.2.0. [source](patches): Remove. * gnu/packages/gstreamer.scm (gst-plugins-bad)[arguments]: Add phase to patch hard-coded openjpeg-2.1 path.
2017-08-10gnu: postgresql: Update to 9.6.4 [fixes CVE-2017-{7546,7547,7548}].Marius Bakke
See <https://www.postgresql.org/about/news/1772/> for more information. * gnu/packages/databases.scm (postgresql): Update to 9.6.4.
2017-08-10gnu: mercurial: Update to 4.2.3 [fixes CVE-2017-1000116].Leo Famulari
* gnu/packages/version-control.scm (mercurial): Update to 4.2.3.
2017-08-10gnu: git: Update to 2.14.1 [fixes CVE-2017-1000117].Leo Famulari
* gnu/packages/version-control.scm (git): Update to 2.14.1.
2017-08-10gnu: subversion: Update to 1.8.19 [fixes CVE-2017-9800].Leo Famulari
* gnu/packages/version-control.scm (subversion): Update to 1.8.19. [source]: Add alternate URL.
2017-08-10gnu: Add emacs-engine-mode.Oleg Pykhalov
* gnu/packages/emacs.scm (emacs-engine-mode): New variable. Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2017-08-10gnu: libsoup: Update to 2.58.2 (fixes CVE-2017-2885).Leo Famulari
* gnu/packages/gnome.scm (libsoup): Update to 2.58.2.
2017-08-10gnu: catimg: Update to 2.4.0.Tobias Geerinckx-Rice
* gnu/packages/image-viewers.scm (catimg): Update to 2.4.0.
2017-08-10gnu: cppcheck: Update to 1.80.Tobias Geerinckx-Rice
* gnu/packages/check.scm (cppcheck): Update to 1.80.
2017-08-10gnu: vdirsyncer: Update to 0.16.1.Tobias Geerinckx-Rice
* gnu/packages/dav.scm (vdirsyncer): Update to 0.16.1.
2017-08-10gnu: ruby-bio-commandeer: Update to 0.4.0.Ben Woodcroft
* gnu/packages/ruby.scm (ruby-bio-commandeer): Update to 0.4.0.
2017-08-10gnu: Add emacs-erc-hl-nicks.Oleg Pykhalov
* gnu/packages/emacs.scm (emacs-erc-hl-nicks): New variable. Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2017-08-10gnu: Add emacs-gitpatch.Oleg Pykhalov
By the way, “gitpatch.el” says different version than release tarball. Do I need to ask a developer? --8<---------------cut here---------------start------------->8--- ;; Author: Feng Shu <tumashu@163.com> ;; Homepage: https://github.com/tumashu/gitpatch ;; Keywords: convenience ;; Package-Requires: ((emacs "24.3")) ;; Version: 0.10 --8<---------------cut here---------------end--------------->8--- >From 9eddf07fa401468738c2f48a25e51ddef2a3ceed Mon Sep 17 00:00:00 2001 From: Oleg Pykhalov <go.wigust@gmail.com> Date: Sat, 29 Jul 2017 14:22:48 +0300 Subject: [PATCH] gnu: Add emacs-gitpatch. * gnu/packages/emacs.scm (emacs-gitpatch): New variable. Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2017-08-10gnu: Add emacs-git-messenger.Oleg Pykhalov
gnu/packages/emacs.scm (emacs-git-messenger): New variable. Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2017-08-09gnu: Update tailon to version 1.3.0.Christopher Baines
From version 1.1.1. * gnu/packages/logging.scm (tailon)[version]: Change to 1.3.0. [inputs]: Add python-tornado-http-auth.
2017-08-09gnu: Add python-tornado-http-auth.Christopher Baines
* gnu/packages/python.scm (python-tornado-http-auth): New variable.
2017-08-10gnu: nmap: Update to 7.60.Marius Bakke
* gnu/packages/admin.scm (nmap): Update to 7.60.
2017-08-10gnu: curl: Update replacement to 7.55.0. [security fixes]Marius Bakke
Fixes CVE-2017-1000099, CVE-2017-1000100, and CVE-2017-100101. See <https://curl.haxx.se/docs/security.html> for details. * gnu/packages/curl.scm (curl)[replacement]: Update to 7.55.0. (curl-7.54.1): Rename to ... (curl-7.55.0): ... this. [source]: Update source URI to match upstream compression method change. [arguments]: Add 'fix-Makefile' phase.
2017-08-10gnu: samba: Update to 4.6.7.Marius Bakke
* gnu/packages/samba.scm (samba): Update to 4.6.7.
2017-08-09gnu: python-nbformat: Update to 4.3.0.Leo Famulari
* gnu/packages/python.scm (python-nbformat, python2-nbformat): Update to 4.3.0.
2017-08-09gnu: gnupg: Update to 2.1.23.Leo Famulari
* gnu/packages/gnupg.scm (gnupg): Update to 2.1.23. [arguments]: Remove 'enable-gpg2-is-gpg' from #:configure-flags, since it is now the default.
2017-08-09gnu: r-wgcna: Update to 1.61.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-wgcna): Update to 1.61. [propagated-inputs]: Add r-rcpp, r-robust, r-survival.
2017-08-09gnu: Add r-robust.Ricardo Wurmus
* gnu/packages/statistics.scm (r-robust): New variable.
2017-08-09gnu: Add r-fit-models.Ricardo Wurmus
* gnu/packages/statistics.scm (r-fit-models): New variable.
2017-08-09gnu: Add r-rrcov.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rrcov): New variable.
2017-08-09gnu: Add r-pcapp.Ricardo Wurmus
* gnu/packages/statistics.scm (r-pcapp): New variable.
2017-08-09gnu: r-gdtools: Update to 0.1.5.Ricardo Wurmus
* gnu/packages/statistics.scm (r-gdtools): Update to 0.1.5.
2017-08-09gnu: r-ggbeeswarm: Update to 0.6.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-ggbeeswarm): Update to 0.6.0.
2017-08-09gnu: icecat: Add more fixes from upstream mozilla-esr52.Mark H Weaver
* gnu/packages/gnuzilla.scm (icecat)[source]: Add fixes for CVE-2017-7802, CVE-2017-7803, CVE-2017-7807, and the remaining 6 out of 23 changesets for CVE-2017-7779.
2017-08-09gnu: icecat: Rename patches to reflect CVE assignments.Mark H Weaver
Document that our existing patches include fixes for CVE-2017-7753, CVE-2017-7784, CVE-2017-7786, CVE-2017-7787, CVE-2017-7791, CVE-2017-7792, CVE-2017-7798, CVE-2017-7798, CVE-2017-7800, CVE-2017-7801, and 17 out of 23 changesets for CVE-2017-7779. * gnu/packages/gnuzilla.scm (icecat)[source]: Rename patches to reflect CVE assignments.
2017-08-09gnu: gnurl: Update to 7.55.0.ng0
* gnu/packages/gnunet.scm (gnurl): Update to 7.55.0. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2017-08-09gnu: virt-manager: Update to 1.4.2.Tobias Geerinckx-Rice
* gnu/packages/virtualization.scm (virt-manager): Update to 1.4.2.
2017-08-09gnu: libgdata: Disable failing tests.Tobias Geerinckx-Rice
* gnu/packages/gnome.scm (libgdata)[arguments]: Add ‘disable-failing-tests’ phase.
2017-08-09gnu: Add reference to (gnu packages graph).Ricardo Wurmus
This is a follow-up to 1738138cb3a48ed2f55c59c8d7c6ce12a4c4dcb3.
2017-08-09gnu: r-igraph: Move to (gnu packages graph).Ricardo Wurmus
* gnu/packages/statistics.scm (r-igraph): Move from here... * gnu/packages/graph.scm (r-igraph): ...to here.
2017-08-09gnu: Add python-igraph.Ricardo Wurmus
* gnu/packages/graph.scm (python-igraph): New variable.
2017-08-09gnu: Add igraph.Ricardo Wurmus
* gnu/packages/graph.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2017-08-09gnu: viewnior: Don't build icon-theme.cache.Efraim Flashner
* gnu/packages/image-viewers.scm (viewnior)[arguments]: Add phase to disable building the icon-theme.cache.
2017-08-09gnu: googletest: Build shared libraries.Manolis Ragkousis
* gnu/packages/check.scm (googletest)[arguments]: Pass "-DBUILD_SHARED_LIBS=ON" in #:configure-flags.
2017-08-09gnu: Add ois.Manolis Ragkousis
* gnu/packages/game-development.scm (ois): New variable.
2017-08-09gnu: dealii: Update to 8.5.0.Eric Bavier
* gnu/packages/maths.scm (dealii): Update to 8.5.0. [arguments]: Delete 'hint-example-prefix phase, which would need adjusting for this version. Users can use e.g. 'export DEAL_II_DIR=$GUIX_ENVIRONMENT'. Adjust configuration flags.
2017-08-09gnu: stress-make: Patch default shell.Eric Bavier
* gnu/packages/debug.scm (stress-make)[arguments]: Add 'set-default-shell phase.
2017-08-09gnu: suitesparse: Update to 4.5.5.Eric Bavier
* gnu/packages/maths.scm (suitesparse): Update to 4.5.5. [source]: Add 'modules' and 'snippet' field to remove bundled source. [arguments]: Remove 'prepare-out' phase. Adjust #:make-flags for metis. Make build parallel, since it now appears to be safe. [inputs]: Add metis.
2017-08-09gnu: suitesparse: Use modify-phases.Eric Bavier
* gnu/packages/maths.scm (suitesparse)[arguments]: Use modify-phases.
2017-08-09gnu: petsc, slepc: Use 'parallel-job-count'.Eric Bavier
* gnu/packages/maths.scm (petsc, slepc)[arguments]: Set #:make-flags to override default unlimited '-j'. (petsc)[arguments]: Scrub build machine cores from installed files in 'clean-local-references' phase.
2017-08-09gnu: slepc: Update to 3.7.4.Eric Bavier
* gnu/packages/maths.scm (slepc): Update to 3.7.4. [source]: Use direct source link. Remove 'file-name' field.
2017-08-09gnu: petsc: Update to 3.7.6.Eric Bavier
* gnu/packages/maths.scm (petsc): Update to 3.7.6.
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