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2023-03-21gnu: manuskript: Add bash-minimal to inputs.Maxim Cournoyer
* gnu/packages/text-editors.scm (manuskript) [inputs]: Add bash-minimal.
2023-03-21gnu: manuskript: Update to 0.15.0.Nicolas Goaziou
* gnu/packages/text-editors.scm (manuskript): Update to 0.15.0. [inputs]: Add PYTHON-PYENCHANT. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2023-03-21gnu: diffoscope: Update to 239.Vagrant Cascadian
* gnu/packages/diffoscope.scm (diffoscope): Update to 239. [native-inputs]: Replace poppler-next with poppler. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2023-03-21gnu: python-pypandoc: Upgrade to 1.7.5.Hugo Buddelmeijer
The tests of python-pypandoc 1.6.5 fail; these are fixed in 1.7.5: https://github.com/JessicaTegner/pypandoc/commit/6670e906dccaddcfcdec228e34e0eaffc20ae791 The tests of later versions of python-pypandoc also fail though: https://github.com/JessicaTegner/pypandoc/pull/327 Finally, python-pypandoc requires the pandoc data to be embeded in the binary: https://github.com/jgm/pandoc/blob/main/INSTALL.md#creating-a-relocatable-binary * gnu/packages/python-xyz.scm (python-pypandoc): Upgrade to 1.7.5 * gnu/packages/haskel-xyz.scm (pandoc): Embed data files. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-21gnu: pocl: Update to 3.1Andy Tai
* gnu/packages/opencl.scm (pocl): Update to 3.1 [native-inputs]: Add python-3 [arguments]: Update RPATH. Skip failed tests on aarch64 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-21gnu: ssh-to-age: Update to 1.1.2.Jack Hill
* gnu/packages/password-utils.scm (ssh-to-age): Update to 1.1.2. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-21gnu: pass-age: Update to 1.7.4a1.Jack Hill
* gnu/packages/password-utils.scm (pass-age): Update to 1.7.4a1. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-21gnu: go-filippo-io-age: Update to 1.1.1.Jack Hill
* gnu/packages/golang.scm (go-filippo-io-age): Update to 1.1.1. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-21gnu: Add dvisvgm.Thomas Albers
* gnu/packages/tex.scm (dvisvgm): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-21gnu: fnlfmt: Update to 0.3.0.Ludovic Courtès
* gnu/packages/lua.scm (fnlfmt): Update to 0.3.0.
2023-03-21gnu: fennel: Update to 1.3.0.Yovan Naumovski
* gnu/packages/lua.scm (fennel): Update to 1.3.0. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-21gnu: vtk: Remove reference to GCC.Ludovic Courtès
This removes GCC from the closure of VTK, reducing its size by 200 MiB (17%). * gnu/packages/image-processing.scm (vtk)[arguments]: Change to gexps. Add #:phases. (vtk-7)[arguments]: Turn #:configure-flags into a gexp.
2023-03-21gnu: vtk: Enable OpenMP, TBB, and Open MPI support.Ludovic Courtès
* gnu/packages/image-processing.scm (vtk)[arguments]: Pass options to enable OpenMP, TBB, and MPI. [inputs]: Add OPENMPI. [propagated-inputs]: Add TBB.
2023-03-21gnu: gnulib: Depend on git-minimal/pinned.Josselin Poiret
* gnu/packages/build-tools.scm (gnulib)[native-inputs]: Change git to git-minimal/pinned. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-21gnu: fdroidcl: Update to 0.7.0.Sergey Trofimov
* gnu/packages/android.scm (fdroidcl): Update to 0.7.0. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2023-03-21gnu: Add go-github-com-schollz-progressbar-v3.Sergey Trofimov
* gnu/packages/golang.scm (go-github-com-schollz-progressbar-v3): New variable. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2023-03-21gnu: Add go-github-com-mitchellh-colorstring.Sergey Trofimov
* gnu/packages/golang.scm (go-github-com-mitchellh-colorstring): New variable. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2023-03-21gnu: Add samplebrain.Antero Mejr
* gnu/packages/music.scm (samplebrain): New variable. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2023-03-21gnu: guix-build-coordinator: Update to 0-74.804165f.Christopher Baines
* gnu/packages/package-management.scm (guix-build-coordinator): Update to 0-74.804165f.
2023-03-21gnu: Update URLs of migrated repositories.Guillaume Le Vaillant
* gnu/packages/lisp-xyz.scm (sbcl-bst, sbcl-cl-octet-streams, sbcl-lzlib, sbcl-simple-parallel-tasks, sbcl-cl-z85, sbcl-utm-ups, sbcl-mgrs, sbcl-maidenhead, sbcl-olc, sbcl-simple-neural-network, sbcl-zstd)[source, home-page]: Use codeberg URL instead of github one. * gnu/packages/radio.scm (convert-samples)[source, home-page]: Likewise.
2023-03-21gnu: paulxstretch: Patch paths.Sughosha
* gnu/packages/music.scm (paulxstretch) [arguments]: Add patch-paths phase. [inputs]: Add dconf, fontconfig and glib:bin. Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2023-03-21gnu: Add python-brian2tools.Lars-Dominik Braun
* gnu/packages/machine-learning.scm (python-brian2tools): New variable.
2023-03-21gnu: Add python-libneuroml.Lars-Dominik Braun
* gnu/packages/python-science.scm (python-libneuroml): New variable.
2023-03-21gnu: Add python-pylems.Lars-Dominik Braun
* gnu/packages/python-science.scm (python-pylems): New variable.
2023-03-21gnu: Add python-markdown-strings.Lars-Dominik Braun
* gnu/packages/python-xyz.scm (python-markdown-strings): New variable.
2023-03-21gnu: r-tibble: Update to 3.2.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-tibble): Update to 3.2.1.
2023-03-21gnu: r-keras: Update to 2.11.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-keras): Update to 2.11.1.
2023-03-21gnu: r-intervals: Update to 0.15.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-intervals): Update to 0.15.3.
2023-03-21gnu: r-maldiquant: Update to 1.22.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-maldiquant): Update to 1.22.1.
2023-03-21gnu: r-metafor: Update to 4.0-0.Ricardo Wurmus
* gnu/packages/cran.scm (r-metafor): Update to 4.0-0. [propagated-inputs]: Add r-numderiv. [native-inputs]: Add r-r-rsp.
2023-03-21gnu: r-qgraph: Update to 1.9.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-qgraph): Update to 1.9.4.
2023-03-21gnu: r-ggfortify: Update to 0.4.16.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggfortify): Update to 0.4.16.
2023-03-21gnu: r-sf: Update to 1.0-12.Ricardo Wurmus
* gnu/packages/cran.scm (r-sf): Update to 1.0-12.
2023-03-21gnu: r-glmmtmb: Update to 1.1.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-glmmtmb): Update to 1.1.6.
2023-03-21gnu: r-fnn: Update to 1.1.3.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-fnn): Update to 1.1.3.2.
2023-03-21gnu: r-truncnorm: Update to 1.0-9.Ricardo Wurmus
* gnu/packages/cran.scm (r-truncnorm): Update to 1.0-9.
2023-03-21gnu: r-partykit: Update to 1.2-19.Ricardo Wurmus
* gnu/packages/cran.scm (r-partykit): Update to 1.2-19.
2023-03-21gnu: r-nmf: Update to 0.26.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-nmf): Update to 0.26.
2023-03-21gnu: sbcl-history-tree: Update to 0.1.1.Pierre Neidhardt
* gnu/packages/lisp-xyz.scm (sbcl-history-tree): Update to 0.1.1.
2023-03-21gnu: r-singlecellexperiment: Update to 1.20.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-singlecellexperiment): Update to 1.20.1.
2023-03-21gnu: r-variancepartition: Update to 1.28.9.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.28.9.
2023-03-21gnu: r-biocparallel: Update to 1.32.6.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.32.6.
2023-03-20gnu: Add mygnuhealth.Petr Hodina
* gnu/packages/medical.scm (mygnuhealth): New variable. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Co-authored-by: Morgan Smith <Morgan.J.Smith@outlook.com> Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2023-03-20gnu: zabbix-agentd: Update to 6.0.14.Kaelyn Takata
* gnu/packages/monitoring.scm (zabbix-agentd): Update to 6.0.14. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2023-03-20gnu: tesseract-ocr: Use standard TESSDATA_PREFIX.Simon South
* gnu/packages/ocr.scm (tesseract-ocr-tessdata-fast): Install data to 'share/tessdata' prefix rather than 'share/tesseract-ocr/tessdata'. (tesseract-ocr) [arguments]: Delete adjust-TESSDATA_PREFIX-macro. Adjust installation prefix in install-minimal-tessdata phase. [native-search-paths]: Search for files under share/tessdata directly. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2023-03-20gnu: emacs-magit-gerrit: Update to 0.4-1.a975215.Maxim Cournoyer
* gnu/packages/emacs-xyz.scm (emacs-magit-gerrit): Update to 0.4-1.a975215.
2023-03-20gnu: emacs-magit: Update to 3.3.0-4.a760dd1.Maxim Cournoyer
This update resolves a problem where configuring a remote would result in the error "Symbol’s function definition is void: transient--with-suspended-override". * gnu/packages/emacs-xyz.scm (emacs-magit): Update to 3.3.0-4.a760dd1.
2023-03-20gnu: emacs-transient: Update to 0.3.7-1.0ae0de4.Maxim Cournoyer
* gnu/packages/emacs-xyz.scm (emacs-transient): Update to 0.3.7-1.0ae0de4. [propagated-inputs]: Remove emacs-dash; add emacs-compat.
2023-03-21gnu: lepton-eda: Update to 1.9.18-20220529.Ricardo Wurmus
* gnu/packages/engineering.scm (lepton-eda): Update to 1.9.18-20220529. [inputs]: Add guile-readline. [arguments]: Adjust build phase 'fix-dynamic-link; add build phase 'fix-tests.
2023-03-21gnu: Add ctrlr.Ricardo Wurmus
* gnu/packages/music.scm (ctrlr): New variable.