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2015-10-13gnu: python-scipy, python2-scipy: Propagate Python inputs.Ricardo Wurmus
* gnu/packages/python.scm (python-scipy)[inputs]: Move "python-numpy", "python-matplotlib", and "python-pyparsing" to propagated-inputs; move "python-nose" and "python-sphinx" to native-inputs. [propagated-inputs]: New field. [native-inputs]: Move "python-nose" and "python-sphinx" from inputs field here. (python2-scipy): Modify propagated-inputs instead of inputs field.
2015-10-13gnu: icedtea6: Update to 1.13.8.Ricardo Wurmus
* gnu/packages/java.scm (icedtea6): Update to 1.13.8.
2015-10-13gnu: icedtea6: Replace "ant-bootstrap" with "ant".Ricardo Wurmus
* gnu/packages/java.scm (icedtea6)[native-inputs]: Replace "ant-bootstrap" with "ant". [arguments]: Remove steps to unpack and use "ant-bootstrap". (icedtea7)[native-inputs]: Remove explicit references to "ant-bootstrap" and "ant".
2015-10-13gnu: ant: Build with GCJ.Ricardo Wurmus
* gnu/packages/java.scm (ant)[native-inputs]: Replace "icedtea6" with "gcj".
2015-10-13gnu: gcj-4.8, gcj: Update to default GCC version.Ricardo Wurmus
* gnu/packages/gcc.scm (gcj-4.8): Inherit from "gcc" package and rename variable to... (gcj): ...this new variable. (ecj-bootstrap-4.8): Rename variable to... (ecj-bootstrap): ...this, updating to version 4.9. * gnu/packages/java.scm (icedtea6)[native-inputs]: Replace "gcj-4.8" with "gcj". * gnu/packages/music.scm (tuxguitar)[native-inputs]: Likewise.
2015-10-13gnu: abbaye: Use 'modify-phases'.Alex Kost
* gnu/packages/games.scm (abbaye)[arguments]: Use 'modify-phases'.
2015-10-13gnu: Add manaplus.Alex Kost
* gnu/packages/games.scm (manaplus): New variable.
2015-10-12gnu: geiser: Update to 0.8.David Thompson
* gnu/packages/emacs.scm (geiser): Update to 0.8.
2015-10-12Merge branch 'core-updates'Ludovic Courtès
2015-10-12gnu: lilypond: Hardcode path to "gs" executable.Ricardo Wurmus
* gnu/packages/music.scm (lilypond)[arguments]: Add build phase "hardcode-path-to-gs".
2015-10-12gnu: Add python-traitlets.Ricardo Wurmus
* gnu/packages/python.scm (python-traitlets, python2-traitlets): New variables.
2015-10-12gnu: Add python-ipython-genutils.Ricardo Wurmus
* gnu/packages/python.scm (python-ipython-genutils, python2-ipython-genutils): New variables.
2015-10-12gnu: Add python-simplegeneric.Ricardo Wurmus
* gnu/packages/python.scm (python-simplegeneric, python2-simplegeneric): New variables.
2015-10-12gnu: Add python-pickleshare.Ricardo Wurmus
* gnu/packages/python.scm (python-pickleshare, python2-pickleshare): New variables.
2015-10-12gnu: Add python-pathpy.Ricardo Wurmus
* gnu/packages/python.scm (python-pathpy, python2-pathpy): New variables.
2015-10-12gnu: Add python-pytest-runner.Ricardo Wurmus
* gnu/packages/python.scm (python-pytest-runner, python2-pytest-runner): New variables.
2015-10-12gnu: Add python-setuptools-scm.Ricardo Wurmus
* gnu/packages/python.scm (python-setuptools-scm, python2-setuptools-scm): New variables.
2015-10-12gnu: Add python-pexpect.Ricardo Wurmus
* gnu/packages/python.scm (python-pexpect, python2-pexpect): New variables.
2015-10-12gnu: bwa: Disable on non-x86_64.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (bwa)[supported-systems]: Add field.
2015-10-12gnu: sdl-union: Wrap into a procedure and export it.Alex Kost
Suggested by Ludovic Courtès <ludo@gnu.org>. * gnu/packages/sdl.scm (sdl-union): Make it a procedure returning 'sdl-union' package. (guile-sdl): Use it.
2015-10-12gnu: Add physfs.Alex Kost
* gnu/packages/game-development.scm (physfs): New variable.
2015-10-11gnu: guile: Add guile-wisp.Christopher Allan Webber
* gnu/packages/guile.scm (guile-wisp): New variable.
2015-10-11gnu: Add MARS.Ricardo Wurmus
* gnu/packages/games.scm (mars): New variable. * gnu/packages/patches/mars-install.patch: New file. * gnu/packages/patches/mars-sfml-2.3.patch: New file. * gnu-system.am (dist_patch_DATA): Add them.
2015-10-11gnu: wicd: Install 'index.theme' file in the right place.宋文武
This is a followup to 800d8d. * gnu/packages/wicd.scm (wicd)[arguments]: Install a copy of 'index.theme' from 'hicolor-icon-theme' into $out/share/icons/hicolor.
2015-10-10gnu: gnupg: Update to 2.1.9.Mark H Weaver
* gnu/packages/gnupg.scm (gnupg): Update to 2.1.9.
2015-10-10gnu: Add python-bandit.Cyril Roelandt
* gnu/packages/openstack.scm (python-bandit, python2-bandit): New variables.
2015-10-10gnu: Update python-fixturesCyril Roelandt
* gnu/packages/python.scm (python-fixtures): Update. * gnu/packages/python.scm (python-fixtures-0.3.16, python2-fixtures-0.3.16, python-pbr-0.11, python2-pbr-0.11): New variables. * gnu/packages/python.scm (python-testrepository): Use python-fxitures-0.3.16 instead of python-fixtures in the inputs.
2015-10-10gnu: Add python-pip.Cyril Roelandt
* gnu/packages/python.scm (python-pip, python2-pip): New variables.
2015-10-08Revert "gnu: python: Do not retain references to build tools."Ludovic Courtès
This reverts commit 14f8dae6b1e42cfd37678d64c137932b91656a41, which was unintentionally pushed (it does not work with Python 3.)
2015-10-08Merge branch 'master' into core-updatesMark H Weaver
2015-10-08gnu: libunwind: Add fix for CVE-2015-3239.Mark H Weaver
* gnu/packages/patches/libunwind-CVE-2015-3239.patch: New file. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/libunwind.scm (libunwind)[source]: Add patch.
2015-10-08gnu: libwmf: Add fixes for several security flaws.Mark H Weaver
* gnu/packages/patches/libwmf-CAN-2004-0941.patch, gnu/packages/patches/libwmf-CVE-2007-0455.patch, gnu/packages/patches/libwmf-CVE-2007-2756.patch, gnu/packages/patches/libwmf-CVE-2007-3472.patch, gnu/packages/patches/libwmf-CVE-2007-3473.patch, gnu/packages/patches/libwmf-CVE-2007-3477.patch, gnu/packages/patches/libwmf-CVE-2009-3546.patch: New files. * gnu/packages/patches/libwmf-CVE-2015-0848+4588+4695+4696.patch: Delete file. Replace with ... * gnu/packages/patches/libwmf-CVE-2015-0848+CVE-2015-4588.patch, gnu/packages/patches/libwmf-CVE-2015-4695.patch, gnu/packages/patches/libwmf-CVE-2015-4696.patch: ... these new files. * gnu-system.am (dist_patch_DATA): Adjust accordingly. * gnu/packages/image.scm (libwmf)[source]: Adjust set of patches.
2015-10-08gnu: unzip: Add various fixes.Mark H Weaver
* gnu/packages/patches/unzip-increase-size-of-cfactorstr.patch: Delete file. Replace with ... * gnu/packages/patches/unzip-overflow-long-fsize.patch: ... this new file. * gnu/packages/patches/unzip-attribs-overflow.patch, gnu/packages/patches/unzip-fix-overflows-and-infloop.patch, gnu/packages/patches/unzip-format-secure.patch: New files. * gnu/packages/patches/unzip-CVE-2014-9636.patch: Replace contents with fixed patch from Fedora. * gnu-system.am (dist_patch_DATA): Adjust accordingly. * gnu/packages/zip.scm (unzip)[source]: Adjust list of patches.
2015-10-08gnu: wpa-supplicant: Update to 2.5.Mark H Weaver
* gnu/packages/patches/wpa-supplicant-2015-2-fix.patch, gnu/packages/patches/wpa-supplicant-2015-3-fix.patch, gnu/packages/patches/wpa-supplicant-2015-4-fix-pt1.patch, gnu/packages/patches/wpa-supplicant-2015-4-fix-pt2.patch, gnu/packages/patches/wpa-supplicant-2015-4-fix-pt3.patch, gnu/packages/patches/wpa-supplicant-2015-4-fix-pt4.patch, gnu/packages/patches/wpa-supplicant-2015-4-fix-pt5.patch, gnu/packages/patches/wpa-supplicant-2015-5-fix.patch, gnu/packages/patches/wpa-supplicant-CVE-2015-1863.patch: Delete files. * gnu-system.am (dist_patch_DATA): Remove them. * gnu/packages/admin.scm (wpa-supplicant-minimal): Update to 2.5. Remove patches.
2015-10-08gnu: python-h5py: Fix path to hdf5 library.Ricardo Wurmus
* gnu/packages/python.scm (python-h5py)[arguments]: Add "fix-hdf5-paths" phase.
2015-10-08gnu: python-h5py, python2-h5py: Correct inputs.Ricardo Wurmus
* gnu/packages/python.scm (python-h5py) [inputs]: Remove python-cython and python-numpy. [propagated-inputs]: New field. [native-inputs]: Drop python-setuptools and add python-cython. (python2-h5py): Replace "inputs" with "propagated-inputs".
2015-10-08gnu: Add python-joblib.Ricardo Wurmus
* gnu/packages/python.scm (python-joblib, python2-joblib): New variables.
2015-10-08Correct "Revert "gnu: camlp4: Remove extra input.""Efraim Flashner
This corrects a typo in 0d1c0660d7b446188b36f19d0dd79d8f97bd4360.
2015-10-08Revert "gnu: camlp4: Remove extra input."Efraim Flashner
This reverts commit d04efa0fff908de0f8822a27582b4b1c3dcae553.
2015-10-07Merge branch 'master' into core-updatesMark H Weaver
2015-10-07gnu: webkitgtk-2.4: Fix potential code execution vulnerability.Mark H Weaver
* gnu/packages/patches/webkitgtk-2.4-sql-init-string.patch: New file. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/webkit.scm (webkitgtk-2.4)[source]: Add patch.
2015-10-07gnu: libvpx: Set size limit to avoid CVE-2015-1258.Mark H Weaver
* gnu/packages/video.scm (libvpx)[arguments]: Add "--size-limit" argument to configure.
2015-10-07gnu: openjpeg-2.x: Add fix for CVE-2015-6581.Mark H Weaver
* gnu/packages/patches/openjpeg-CVE-2015-6581.patch: New file. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/image.scm (openjpeg, openjpeg-2.0)[source]: Add patch.
2015-10-07gnu: gdk-pixbuf: Update to 2.32.1.Mark H Weaver
* gnu/packages/gtk.scm (gdk-pixbuf): Update to 2.32.1.
2015-10-08gnu: python: Simplify list of configure flags.Ludovic Courtès
* gnu/packages/patches/python-2.7-search-paths.patch, gnu/packages/patches/python-3-search-paths.patch: New files. * gnu-system.am (dist_patch_DATA): Add them. * gnu/packages/python.scm (python-2)[source]: Use first patch. [arguments]: Remove now unneeded CPPFLAGS and LDFLAGS. (python)[source]: Use second patch. (python-minimal)[arguments]: Remove CPPFLAGS and LDFLAGS.
2015-10-07gnu: python: Build the tkinter module.Ludovic Courtès
Fixes <http://bugs.gnu.org/20889>. Reported by Federico Beffa <beffa@ieee.org>. * gnu/packages/python.scm (python-2)[arguments]: Pass --with-tcltk-includes and --with-tcltk-libs. [inputs]: Add TCL and TK.
2015-10-07gnu: python: Add "minimal" variants.Ludovic Courtès
* gnu/packages/python.scm (python2-minimal, python-minimal): New variables. (wrap-python3): New procedure. (python-wrapper): Use it. (python-minimal-wrapper): New variable. * gnu/packages/xml.scm (libxslt)[native-inputs]: Use PYTHON-MINIMAL-WRAPPER instead of PYTHON-WRAPPER. * gnu/packages/xorg.scm (xcb-proto, libxcb, xorg-server): Likewise.
2015-10-07gnu: camlp4: Remove extra input.Efraim Flashner
* gnu/packages/ocaml.scm (camlp4)[inputs]: Removed duplicate "ocaml" entry from native-inputs.
2015-10-07gnu: gprolog: Remove armhf from supported architectures.Efraim Flashner
* gnu/packages/gprolog.scm (gprolog)[supported-systems]: Remove armhf-linux from the list of supported systems.
2015-10-07gnu: mosh: Update to 1.2.5.Efraim Flashner
* gnu/packages/ssh.scm (mosh): Update to 1.2.5.
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