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* gnu/packages/linux.scm (linux-pam-1.2)[name]: Remove.
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* gnu/packages/patches/linux-pam-no-setfsuid.patch: New file.
* gnu/packages/linux.scm (linux-pam)[source]: Use it.
(linux-pam-1.2)[source]: Likewise.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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Fixes a 'binutils-cross-boot0' build failure on mips64el.
Reported at
<https://lists.gnu.org/archive/html/guix-devel/2016-09/msg01083.html>.
* gnu/packages/patches/binutils-mips-bash-bug.patch: New file.
* gnu/packages/base.scm (binutils)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
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Fixes <http://bugs.gnu.org/24442>.
Reported by Ivan Vilata i Balaguer <ivan@selidor.net>.
* gnu/packages/gettext.scm (gnu-gettext)[native-inputs]: Add 'emacs'.
[arguments]: Add 'add-emacs-autoloads' phase.
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* gnu/packages/gettext.scm (gnu-gettext): Rename to...
(gettext-minimal): ... this. Adjust synopsis and description.
(gnu-gettext): Inherit from it.
(po4a): Use 'gettext-minimal' instead of 'gnu-gettext'.
* gnu/packages/acl.scm: Likewise.
* gnu/packages/admin.scm: Likewise.
* gnu/packages/apl.scm: Likewise.
* gnu/packages/attr.scm: Likewise.
* gnu/packages/audio.scm: Likewise.
* gnu/packages/base.scm: Likewise.
* gnu/packages/cdrom.scm: Likewise.
* gnu/packages/commencement.scm: Likewise.
* gnu/packages/crypto.scm: Likewise.
* gnu/packages/databases.scm: Likewise.
* gnu/packages/disk.scm: Likewise.
* gnu/packages/documentation.scm: Likewise.
* gnu/packages/education.scm: Likewise.
* gnu/packages/engineering.scm: Likewise.
* gnu/packages/enlightenment.scm: Likewise.
* gnu/packages/fcitx.scm: Likewise.
* gnu/packages/fontutils.scm: Likewise.
* gnu/packages/freedesktop.scm: Likewise.
* gnu/packages/games.scm: Likewise.
* gnu/packages/gkrellm.scm: Likewise.
* gnu/packages/glib.scm: Likewise.
* gnu/packages/gnome.scm: Likewise.
* gnu/packages/grub.scm: Likewise.
* gnu/packages/gtk.scm: Likewise.
* gnu/packages/guile.scm: Likewise.
* gnu/packages/ibus.scm: Likewise.
* gnu/packages/irc.scm: Likewise.
* gnu/packages/iso-codes.scm: Likewise.
* gnu/packages/kde-frameworks.scm: Likewise.
* gnu/packages/kodi.scm: Likewise.
* gnu/packages/linux.scm: Likewise.
* gnu/packages/man.scm: Likewise.
* gnu/packages/maths.scm: Likewise.
* gnu/packages/mono.scm: Likewise.
* gnu/packages/mp3.scm: Likewise.
* gnu/packages/music.scm: Likewise.
* gnu/packages/nano.scm: Likewise.
* gnu/packages/networking.scm: Likewise.
* gnu/packages/package-management.scm: Likewise.
* gnu/packages/pdf.scm: Likewise.
* gnu/packages/sawfish.scm: Likewise.
* gnu/packages/statistics.scm: Likewise.
* gnu/packages/terminals.scm: Likewise.
* gnu/packages/version-control.scm: Likewise.
* gnu/packages/vpn.scm: Likewise.
* gnu/packages/w3m.scm: Likewise.
* gnu/packages/webkit.scm: Likewise.
* gnu/packages/wicd.scm: Likewise.
* gnu/packages/wine.scm: Likewise.
* gnu/packages/xdisorg.scm: Likewise.
* gnu/packages/xorg.scm: Likewise.
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* gnu/packages/openldap.scm (openldap)[inputs]: Switch to gnutls.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/perl.scm (perl)[arguments]: Split 'configure' phase into
'setup-configure' and 'configure' phases.
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* gnu/packages/xorg.scm (xorg-server)[arguments]: Pass
"--with-default-font-path=" to #:configure-flags.
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* gnu/packages/xml.scm (expat): Update to 2.2.0.
[source]: Use 'expat-CVE-2016-0718-fix-regression.patch'. Remove obsolete
patches.
* gnu/packages/patches/expat-CVE-2016-0718-fix-regression.patch: New file.
* gnu/packages/patches/expat-CVE-2012-6702-and-CVE-2016-5300.patch,
gnu/packages/patches/expat-CVE-2015-1283-refix.patch,
gnu/packages/patches/expat-CVE-2016-0718.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Add and remove patches.
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* gnu/packages/maths.scm (openblas): Update to 0.2.19.
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* gnu/packages/patches/gcc-arm-bug-71399.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gcc.scm (gcc-4.9)[source]: Use it.
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* gnu/packages/image.scm (libjpeg): Update to 9b.
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* gnu/packages/image.scm (libpng): Update to 1.6.25.
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* gnu/packages/tls.scm (gnutls): Update to 3.5.4.
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* gnu/packages/statistics.scm (r): Update to 3.3.1.
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* gnu/packages/statistics.scm (r)[inputs]: Add openblas.
[arguments]: Adapt configure flags.
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* gnu/packages/linux.scm (linux-libre-headers): Use modify phases.
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* gnu/packages/tls.scm (openssl)[arguments]: Delete empty directory in
'move-man3-pages' phase.
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* gnu/packages/linux.scm (eudev): Update to 3.2.
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* gnu/packages/linux.scm (procps)[arguments]: Add 'disable-strtod-test'
phase.
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* gnu/packages/gawk.scm (gawk)[arguments]: Use 'modify-phases'.
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* gnu/packages/gawk.scm (gawk): Update to 4.1.4.
[source]: Remove 'patches'.
[arguments]: Add 'adjust-test-infrastructure' phase.
* gnu/packages/patches/gawk-fts-test.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
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* gnu/packages/base.scm (glibc/linux): Update to 2.24.
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* gnu/packages/ghostscript.scm (ghostscript-wrapper, ghostscript-gs)
(ghostscript-gs/x): Remove variables.
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* gnu/packages/engineering.scm (fastcap)[native-inputs],
gnu/packages/lout.scm (lout)[native-inputs],
gnu/packages/ocaml.scm (unison)[native-inputs],
gnu/packages/plotutils.scm (asymptote)[native-inputs],
gnu/packages/skribilo.scm (skribilo)[native-inputs]: Remove
ghostscript-gs.
* gnu/packages/gv.scm (gv)[propagated-inputs],
gnu/packages/music.scm (lilypond)[inputs],
gnu/packages/scheme.scm (chez-scheme)[native-inputs]: Use
ghostscript over ghostscript-gs.
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This is a followup to commit eb354bdacbf4154ec66038dac07f19bf4ced1fad.
* gnu/packages/ghostscript.scm (ghostscript)[arguments]: Create a
symlink from `gsc' to `gs' to provide a `gs' binary.
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* gnu/packages/python.scm (python2-ipython): Inherit using
strip-python2-variant.
[propagated-inputs]: Remove work-around for python2-terminado.
[inputs]: Remove work-around for python2-jsonschema, python2-matplotlib,
python2-numpy, python2-requests.
(python-inputs)[properties]: New field.
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* gnu/packages/python.scm (python2-numexpr): Replace package definition
with 'package-with-python2', using 'strip-python2-variant'.
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* gnu/packages/python.scm (python2-scikit-image): Inherit using
strip-python2-variant.
[propagated-inputs]: Remove work-around for python2-matplotlib,
python2-numpy, python2-scipy.
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* gnu/packages/python.scm (python-scikit-learn)[source]: Add 'file-name'
field.
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* gnu/packages/python.scm (python2-scikit-learn): Replace package
definition with 'package-with-python2', using 'strip-python2-variant'
to simplify the package definition.
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* gnu/packages/openstack.scm (python-requests-mock): Update to 1.0.0.
[inputs]: Remove python-setuptools. Move python-mock ...
[native-inputs]: ... to here. Add python-discover, python-fixtures,
python-sphinx, python-testrepostory, python-testtools.
[properties]: Add python2-variant.
(python2-requests-mock): inherit stripped variant.
[native-inputs]: Use python2-setuptools.
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This reverts commit b16b16e6c2ba9780ebdf936c325e06ebcc0a950b.
Rationale: gsl-2.2 consistently fails its test suite on i686. Inkscape
depends on gsl, and the grub background image is converted using
inkscape, so i686 systems can no longer be built.
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* gnu/packages/u-boot.scm (dtc)[source]: Add patch.
* gnu/packages/patches/dtc-add-missing-symbols-to-lds.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: David Craven <david@craven.ch>
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* gnu/packages/databases.scm (sqlite)[arguments]: Enable configure-flag
-DSQLITE_ENABLE_DBSTAT_VTAB.
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* gnu/packages/onc-rpc.scm (rpcbind): New variable.
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* gnu/packages/freedesktop.scm (telepathy-mission-control): New variable.
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* gnu/packages/u-boot.scm (u-boot, make-u-boot-package,
u-boot-vexpress_ca9x4, u-boot-malta): New variables.
Co-authored-by: David Craven <david@craven.ch>
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* gnu/packages/u-boot.scm (dtc): New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add file.
Co-authored-by: David Craven <david@craven.ch>
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* gnu/packages/display-managers.scm: New file.
* gnu/packages/slim.scm: Delete file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
* gnu/services/xorg.scm: Likewise.
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* gnu/packages/networking.scm: "Coypright" --> "Copyright".
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Fixes CVE-2016-{3458,3485,3500,3508,3550,3606}.
* gnu/packages/java.scm (icedtea-6): Update to 1.13.12.
[source]: Remove 'icedtea-remove-overrides' patch.
[arguments]: Move ALSA header substitution to 'patch-paths' phase.
* gnu/packages/patches/icedtea-remove-overrides.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
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This reverts commit 25d1b3107fc7ebdc155649722fc257f4dbc4b04a.
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* gnu/packages/xdisorg.scm (rofi): Update to 1.2.0.
[inputs]: Drop libx11 and add xcb-util-xrm.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/xdisorg.scm (xcb-util-xrm): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/astronomy.scm (wcslib): Minor whitespace and grammatical
changes.
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Functionality provided already by python-build-system.
* gnu/packages/games.scm (bambam)[arguments]: Remove 'wrap-binary phase.
[synopsis]: Capitalize first word.
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* gnu/packages/bioinformatics.scm (subread): Update to 1.5.1.
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* gnu/packages/emacs.scm (emacs-auto-complete): New variable.
Signed-off-by: Alex Kost <alezost@gmail.com>
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