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* gnu/packages/gnupg.scm (libgcrypt): Update to 1.6.3.
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In <http://hydra.gnu.org/build/263170>, we see:
153: 12 [patch-usr-bin-file #:native-inputs #f ...]
[...]
?: 1 [regexp-exec # ...]
In ice-9/boot-9.scm:
106: 0 [#<procedure 1998ec0 at ice-9/boot-9.scm:97:6 (thrown-k . args)> encoding-error ...]
ice-9/boot-9.scm:106:20: In procedure #<procedure 1998ec0 at ice-9/boot-9.scm:97:6 (thrown-k . args)>:
ice-9/boot-9.scm:106:20: Throw to key `encoding-error' with args `("scm_to_stringn" "cannot convert narrow string to output locale" 84 #f #f)'.
This is due to that fact that 'patch-/usr/bin/file' read a line
containing a byte sequence with bytes > 127 (namely a copyright sign.)
But this build was running with a C locale, and so those bytes cannot be
represented in that locale, hence this error.
This commit makes the UTF-8 locales available earlier such that
everything can be represented in locale encoding.
* gnu/packages/commencement.scm (glibc-utf8-locales-final): Move
earlier; change "gzip" input to GZIP built with %BOOT4-INPUTS.
(%boot5-inputs): Define to %BOOT4-INPUTS plus
GLIBC-UTF8-LOCALES-FINAL.
(gnu-make-final, coreutils-final, grep-final): Use it instead of
%BOOT4-INPUTS.
(gzip-final): Remove.
(%boot6-inputs): New variable.
(%final-inputs): Use it instead of %BOOT5-INPUTS. Don't rely on
GZIP-FINAL.
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* gnu/packages/aarddict.scm (aarddict), gnu/packages/algebra.scm (arb),
gnu/packages/audio.scm (jack-2, lvtk),
gnu/packages/bioinformatics.scm (bedops, bedtools, bowtie),
gnu/packages/game-development.scm (tiled),
gnu/packages/games.scm (minetest-data, minetest, retroarch),
gnu/packages/jrnl.scm (jrnl), gnu/packages/kde.scm (qjson),
gnu/packages/libevent.scm (libuv), gnu/packages/linux.scm (pflask),
gnu/packages/mail.scm (offlineimap, libetpan),
gnu/packages/maths.scm (arpack-ng), gnu/packages/ninja.scm (ninja),
gnu/packages/nutrition.scm (gourmet),
gnu/packages/python.scm (python-cairocffi), gnu/packages/rdf.scm (lrdf),
gnu/packages/ruby.scm (ruby-i18n), gnu/packages/sxiv.scm (sxiv): Add
'file-name' field to origin.
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* gnu/packages/audio.scm (soundtouch)[arguments]: Move 'bootstrap'
after 'unpack'. Remove custom /usr/bin/file patching, which will
now be handled by the 'patch-usr-bin-file' phase.
* gnu/packages/emacs.scm (emacs-w3m)[arguments]: Rename 'pre-configure'
phase to 'autoconf' and move it after 'unpack'.
* gnu/packages/fontutils.scm (libuninameslist)[arguments]: Move 'bootstrap'
phase after 'unpack'.
* gnu/packages/libevent.scm (libuv)[arguments]: Move 'autogen' phase after
'unpack'. Run "sh autogen.sh" instead of "./autogen.sh".
* gnu/packages/linux.scm (bridge-utils)[arguments]: Move 'bootstrap' phase
after 'unpack'.
* gnu/packages/mail.scm (libetpan)[arguments]: Move 'autogen' phase after
'unpack'. Run "sh autogen.sh" instead of "./autogen.sh". Setenv
"NOCONFIGURE" before running autogen.sh.
* gnu/packages/package-management.scm (guix-devel)[arguments]: Move
'bootstrap' phase after 'unpack'. Run "sh autogen.sh" instead of
"./autogen.sh".
* gnu/packages/rdf.scm (lrdf)[arguments]: Move 'autoreconf' phase after
'remove-out-of-tree-references' phase.
* gnu/packages/tor.scm (privoxy)[arguments]: Move 'autoconf' phase after
'unpack'.
* gnu/packages/web.scm (libpsl)[arguments]: Move 'bootstrap' phase after
'unpack'. Run "sh autogen.sh" instead of "./autogen.sh". Remove
'fix-autogen-shebang' phase.
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This is a followup to commit b0fd2bd.
* gnu/packages/gawk.scm (gawk)[arguments] <install-locales>: Add comment
on why we leave this here.
* gnu/packages/guile.scm (guile-ncurses)[arguments]: Remove
'install-locales' phase.
* gnu/packages/swig.scm (swig)[arguments]: Likewise.
* gnu/packages/python.scm (python-matplotlib): Remove 'LOCPATH' setting
and 'localedef' invocation.
(python-scipy): Likewise.
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This is a followup to commit cd0385b.
* gnu/packages/bioinformatics.scm (hisat)[arguments]: Remove 'unpack'
phase.
* gnu/packages/image.scm (freeimage): Likewise.
* gnu/packages/python.scm (python2-cssutils): Likewise.
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* gnu/packages/gettext.scm (gnu-gettext)[arguments] <patch-tests>: Set
%default-port-encoding. Fixes test failures at
<http://hydra.gnu.org/build/262586>.
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* gnu/packages/cmake.scm (cmake): Update to 3.1.3.
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* gnu/packages/gtk.scm (cairo)[arguments]: Add --enable-tee to
configure-flags.
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* gnu/packages/databases.scm (sqlite): Update to 3.8.8.3.
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* gnu/packages/databases.scm (sqlite)[arguments]: Add "CFLAGS=-O2
-DSQLITE_SECURE_DELETE" to configure-flags.
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Suggested by Andreas Enge <andreas@enge.fr>
at <http://lists.gnu.org/archive/html/guix-devel/2015-02/msg00810.html>.
CMake command lines appear to refer to such file names.
* gnu/packages/ld-wrapper.scm (shared-library?): New procedure.
(library-files-linked): Use it.
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Suggested by Mark H Weaver and Andreas Enge
at <http://lists.gnu.org/archive/html/guix-devel/2015-02/msg00356.html>.
* gnu/packages/commencement.scm (gzip-final, glibc-utf8-locales-final):
New variables.
(%final-inputs): Use them.
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* gnu/packages/graphics.scm (openexr)[synopsis]: Fill in.
[description]: Improve.
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* gnu/packages/patches/grep-CVE-2015-1345.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/base.scm (grep): Add patch.
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* gnu/packages/samba.scm (samba): Update to 3.6.25.
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* gnu/packages/linux.scm (e2fsprogs): Update to 1.42.12.
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* gnu/packages/patches/icecat-CVE-2015-0822.patch,
gnu/packages/patches/icecat-CVE-2015-0827-pt-1.patch,
gnu/packages/patches/icecat-CVE-2015-0827-pt-2.patch,
gnu/packages/patches/icecat-CVE-2015-0827-pt-3.patch,
gnu/packages/patches/icecat-CVE-2015-0831-pt-1.patch,
gnu/packages/patches/icecat-CVE-2015-0831-pt-2.patch,
gnu/packages/patches/icecat-CVE-2015-0836-pt-01.patch,
gnu/packages/patches/icecat-CVE-2015-0836-pt-02.patch,
gnu/packages/patches/icecat-CVE-2015-0836-pt-03.patch,
gnu/packages/patches/icecat-CVE-2015-0836-pt-04.patch,
gnu/packages/patches/icecat-CVE-2015-0836-pt-05.patch,
gnu/packages/patches/icecat-CVE-2015-0836-pt-06.patch,
gnu/packages/patches/icecat-CVE-2015-0836-pt-07.patch,
gnu/packages/patches/icecat-CVE-2015-0836-pt-08.patch,
gnu/packages/patches/icecat-CVE-2015-0836-pt-09.patch,
gnu/packages/patches/icecat-CVE-2015-0836-pt-10.patch,
gnu/packages/patches/icecat-CVE-2015-0836-pt-11.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patches.
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* gnu/packages/lua.scm (luajit): Apply 2 patches.
* gnu-system.am (dist_patch_DATA): Register 2 patches.
* gnu/packages/patches/luajit-no_ldconfig.patch: New file.
* gnu/packages/patches/luajit-symlinks.patch: New file.
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* gnu/packages/video.scm (avidemux, avidemux-2.5): New variables.
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* gnu/packages/video.scm (ffmpeg): Add soxr and twolame as inputs.
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Reported by Mark H Weaver <mhw@netris.org>
at <http://lists.gnu.org/archive/html/guix-devel/2015-02/msg00686.html>.
* gnu/packages/avahi.scm (nss-mdns)[arguments]: Use
--localstatedir=/var.
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* gnu/packages/graphics.scm (ctl): New variable.
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* gnu/packages/graphics.scm (ilmbase, openexr): New variables.
* gnu/packages/patches/openexr-missing-samples.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
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* gnu/packages/audio.scm (portaudio): New variable.
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* gnu/packages/audio.scm (twolame): New variable.
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* gnu/packages/audio.scm (soxr): New variable.
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* gnu/packages/audio.scm (soundtouch): New variable.
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* gnu/packages/audio.scm (libsbsms): New variable.
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* gnu/packages/linux.scm (cpufrequtils): New variable.
* gnu/packages/patches/cpufrequtils-fix-aclocal.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
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* gnu/packages/linux.scm (sysfsutils-1): New variable.
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* gnu/packages/linux.scm (sysfsutils): New variable.
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* gnu/packages/base.scm (glibc-utf8-locales): New variable.
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* gnu/packages/rdf.scm (python2-rdflib): Add argument to build with python-2.
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Suggested by Andreas Schwab <schwab@linux-m68k.org>
at <http://lists.gnu.org/archive/html/guix-devel/2015-02/msg00652.html>.
* gnu/packages/base.scm (glibc)[native-search-paths]: Change
"share/locale" to "lib/locale".
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* gnu/packages/rdf.scm (python2-rdflib): New variable.
(python-rdflib): Add patch.
* gnu/packages/patches/python2-rdflib-drop-sparqlwrapper.patch: New file.
* gnu-system.am (dist_patch_DATA): Register patch.
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* gnu/packages/python.scm (python-html5lib): Add propagated input python-six.
(python2-html5lib): Add propagated input python2-six.
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* gnu/packages/python.scm (python2-six): New variable.
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* gnu/packages/rdf.scm (python-rdflib): Correct typo in the name of an input.
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Suggested by Andreas Schwab <schwab@linux-m68k.org>
at <http://lists.gnu.org/archive/html/guix-devel/2015-02/msg00652.html>.
* gnu/packages/base.scm (glibc-locales) <#:configure-flags>: Change
"/share/locale" to "/lib/locale".
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* gnu/packages/pumpio.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
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* gnu/packages/games.scm (gnugo): Adjust synopsis.
* gnu/packages/libffcall.scm (libffcall): Likewise.
* gnu/packages/lisp.scm (clisp): Adjust synopsis and description.
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* gnu/packages/audio.scm (timidity++): New variable.
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* gnu/packages/audio.scm (freepats): New variable.
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* gnu/packages/package-management.scm (stow): New variable.
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* gnu/packages/perl.scm (perl-test-output): New variable.
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* gnu/packages/perl.scm (perl-sub-exporter): New variable.
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* gnu/packages/perl.scm (perl-data-optlist): New variable.
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* gnu/packages/perl.scm (perl-capture-tiny): New variable.
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