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2016-09-28gnu: linux-libre-beagle-bone-black: Remove kernel variant.David Craven
linux-libre-beagle-bone-black is misslabeled. This kernel variant is for the original beagle board. * gnu/packages/linux.scm (linux-libre-beagle-bone-black): Remove.
2016-09-28gnu: make-linux-libre: Install device tree files.David Craven
* gnu/packages/linux.scm (make-linux-libre): Install device tree files.
2016-09-28gnu: %default-extra-linux-options: Remove redundant options.David Craven
* gnu/packages/linux.scm (%default-extra-linux-options): Remove redundant options.
2016-09-28gnu: Add sdcc.David Craven
* gnu/packages/sdcc.scm (sdcc): New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2016-09-28gnu: Add picocom.David Craven
* gnu/packages/terminals.scm (picocom): New variable.
2016-09-28gnu: opendht: Propagate msgpack.Lukas Gradl
* gnu/packages/crypto.scm (opendht)[inputs]: Remove msgpack. [propagated-inputs]: Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-09-28gnu: telephony: Add 'license:' prefix.Lukas Gradl
* gnu/packages/telephony.scm (commoncpp) [license]: Add prefix. (ucommon) [license]: Add prefix. (ccrtp) [license]: Add prefix. (osip) [license]: Add prefix. (exosip) [license]: Add prefix. (sipwitch) [license]: Add prefix. (libsrtp) [license]: Add prefix. (libiax2) [license]: Add prefix. (seren) [license]: Add prefix. (pjproject-sfl) [license]: Add prefix. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-09-28gnu: Add gsm.Lukas Gradl
* gnu/packages/audio.scm (gsm): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-09-28gnu: Add dbus-c++.Lukas Gradl
* gnu/packages/glib.scm (dbus-c++): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-09-27gnu: libressl: Update to 2.5.0.Leo Famulari
* gnu/packages/tls.scm (libressl): Update to 2.5.0.
2016-09-28gnu: encfs: Update to 1.9.1.Tobias Geerinckx-Rice
* gnu/packages/crypto.scm (encfs): Update to 1.9.1.
2016-09-28gnu: btrfs-progs: Update to 4.7.3.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (btrfs-progs): Update to 4.7.3.
2016-09-28gnu: zip: Use 'modify-phases'.Tobias Geerinckx-Rice
* gnu/packages/zip.scm (zip)[arguments]: Use 'modify-phases'.
2016-09-27gnu: isc-dhcp: Update bundled bind to 9.9.9-P3 [fixes CVE-2016-2776].Leo Famulari
* gnu/packages/admin.scm (isc-dhcp)[inputs]: Update bundled bind to 9.9.9-P3.
2016-09-27gnu: bind: Update to 9.10.4-P3 [fixes CVE-2016-2776].Leo Famulari
* gnu/packages/dns.scm (bind): Update to 9.10.4-P3.
2016-09-27gnu: Add python-q.Stefan Reichoer
* gnu/packages/python.scm (python-q, python2-q): New variables. Signed-off-by: Leo Famulari <leo@famulari.name>
2016-09-27gnu: expat: Fix regression caused by fix for CVE-2016-0718.Leo Famulari
* gnu/packages/xml.scm (expat)[replacement]: New field. (expat/fixed): New variable. * gnu/packages/patches/expat-CVE-2016-0718-fix-regression.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Leo Famulari <leo@famulari.name>
2016-09-27gnu: Add gctp.Thomas Danckaert
* gnu/packages/maths.scm (gctp): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
2016-09-27gnu: Add gloox.ng0
* gnu/packages/messaging.scm (gloox): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
2016-09-27gnu: femtolisp: Don't build on mips64el or armhf.ng0
* gnu/packages/lisp.scm (femtolisp)[supported-systems]: New field, remove support for mips64el and armhf. Signed-off-by: Leo Famulari <leo@famulari.name>
2016-09-27gnu: Add gobby.Andy Wingo
* gnu/packages/gobby.scm (gobby): New variable.
2016-09-27gnu: Add obby.Andy Wingo
* gnu/packages/gobby.scm (obby): New variable.
2016-09-27gnu: Add libnet6.Andy Wingo
* gnu/packages/gobby.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add new file.
2016-09-27gnu: Add libxml++-2.Andy Wingo
* gnu/packages/gnome.scm (libxml++-2): New variable.
2016-09-27gnu: aria2: Update to 1.27.1.Efraim Flashner
* gnu/packages/bittorrent.scm (aria2): Update to 1.27.1.
2016-09-27gnu: python-plastid: Update to 1.4.6.Ben J Woodcroft
* gnu/packages/bioinformatics.scm (python-plastid, python2-plastid): Update to 1.4.6. [propagated-inputs]: Add python-termcolor.
2016-09-27gnu: Add python-termcolor.Ben J Woodcroft
* gnu/packages/python.scm (python-termcolor, python2-termcolor): New variables.
2016-09-27gnu: python-pysam: Enable tests.Marius Bakke
* gnu/packages/bioinformatics.scm (python-pysam)[source]: Change from PyPi to source archive due to missing test data. [arguments]: Add check phase after install. [native-inputs]: Add python-nose, samtools and bcftools.
2016-09-27gnu: python-pysam: Delete bundled htslib.Marius Bakke
* gnu/packages/bioinformatics.scm (python-pysam)[source]: Add snippet to delete htslib. [arguments]: Add htslib flags in 'set-flags phase. [propagated-inputs]: New field. Add htslib.
2016-09-27gnu: python-pysam: Use 'modify-phases'.Marius Bakke
* gnu/packages/bioinformatics.scm (python-pysam)[arguments]: Use 'modify-phases'.
2016-09-27gnu: Add bcftools.Marius Bakke
* gnu/packages/bioinformatics.scm (bcftools): New variable.
2016-09-27gnu: python2-pbcore: Update to 1.2.10.Marius Bakke
* gnu/packages/bioinformatics.scm (python2-pbcore): Update to 1.2.10. [propagated-inputs]: New field. Add python2-pyxb.
2016-09-27gnu: Add python-pyxb.Marius Bakke
* gnu/packages/xml.scm (python-pyxb, python2-pyxb): New variables.
2016-09-27gnu: python-pysam: Update to 0.9.1.4.Marius Bakke
* gnu/packages/bioinformatics.scm (python-pysam, python2-pysam): Update to 0.9.1.4.
2016-09-26gnu: openssl-next: Update to 1.1.0b [fixes CVE-2016-6309].Leo Famulari
* gnu/packages/tls.scm (openssl-next): Update to 1.1.0b.
2016-09-26gnu: openssl: Update replacement to 1.0.2j [fixes CVE-2016-7052].Leo Famulari
* gnu/packages/tls.scm (openssl): Update replacement to 1.0.2j. (openssl-1.0.2i): Replace with... (openssl-1.0.2j): ... new variable.
2016-09-26gnu: libftdi: Propagate the libusb input.Danny Milosavljevic
* gnu/packages/libftdi.scm (libftdi): Change libusb from an input to a propagated-input. Signed-off-by: Leo Famulari <leo@famulari.name>
2016-09-26gnu: ncbi-vdb: Only build on i686 and x86_64.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (ncbi-vdb)[supported-systems]: Only build on i686 and x86_64. [arguments]: Add mandatory "-msse2" flag to CFLAGS.
2016-09-26gnu: ghc-pandoc: Update to 1.17.2.Ricardo Wurmus
* gnu/packages/haskell.scm (ghc-pandoc): Update to 1.17.2.
2016-09-26gnu: ghc-texmath: Update to 0.8.6.5.Ricardo Wurmus
* gnu/packages/haskell.scm (ghc-texmath): Update to 0.8.6.5.
2016-09-26gnu: ghc-cmark: Update to 0.5.3.1.Ricardo Wurmus
* gnu/packages/haskell.scm (ghc-cmark): Update to 0.5.3.1.
2016-09-26gnu: ghc-highlighting-kate: Update to 0.6.3.Ricardo Wurmus
* gnu/packages/haskell.scm (ghc-highlighting-kate): Update to 0.6.3.
2016-09-26gnu: ghc-pandoc-types: Update to 1.16.1.1.Ricardo Wurmus
* gnu/packages/haskell.scm (ghc-pandoc-types): Update to 1.16.1.1.
2016-09-26gnu: ghc-tagsoup: Update to 0.14.Ricardo Wurmus
* gnu/packages/haskell.scm (ghc-tagsoup): Update to 0.14.
2016-09-26gnu: tbb: Fail on test errors.Ricardo Wurmus
* gnu/packages/tbb.scm (tbb)[arguments]: Add phase "fail-on-test-errors".
2016-09-26gnu: ghc-tls: Update to 1.3.8.Ricardo Wurmus
* gnu/packages/haskell.scm (ghc-tls): Update to 1.3.8.
2016-09-26gnu: tbb: Use modify-phases syntax.Ricardo Wurmus
* gnu/packages/tbb.scm (tbb)[arguments]: Use "modify-phases" syntax.
2016-09-26gnu: vsearch: Update to 2.1.1.Ben Woodcroft
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.1.1.
2016-09-26gnu: azr3: Fix libsigc++ build errors.Ricardo Wurmus
* gnu/packages/audio.scm (azr3)[arguments]: Add "-std=gnu++11" flag. [source]: Add patch. * gnu/packages/patches/azr3.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2016-09-26gnu: qtractor: Update to 0.7.9.Ricardo Wurmus
* gnu/packages/music.scm (qtractor): Update to 0.7.9.
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