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2016-10-28gnu: python-feedparser: Disable the test suite.Leo Famulari
The tests were silently skipped with Python 3.4. With Python 3.5, this caused the build of python-feedparser to fail. * gnu/packages/python.scm (python-feedparser, python2-feedparser)[arguments]: Disable the tests.
2016-10-28gnu: libwebp: Fix CVE-2016-9085.Leo Famulari
* gnu/packages/patches/libwebp-CVE-2016-9085.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/image.scm (libwebp)[source]: Use it.
2016-10-28gnu: libwebp: Update to 0.5.1.Leo Famulari
* gnu/packages/image.scm (libwebp): Update to 0.5.1.
2016-10-28gnu: Add emacs-request.Roel Janssen
* gnu/packages/emacs.scm (emacs-request): New variable.
2016-10-28gnu: Add qwt.Thomas Danckaert
* gnu/packages/qt.scm (qwt): New variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-10-27gnu: Add r-mutationalpatterns.Roel Janssen
* gnu/packages/bioinformatics.scm (r-mutationalpatterns): New variable.
2016-10-27gnu: jasper: Updat eto 1.900.16.Efraim Flashner
* gnu/packages/image.scm (japer): Update to 1.900.16.
2016-10-27gnu: windowmaker: Add support for more image formats.Kei Kebreau
* gnu/packages/gnustep.scm (windowmaker)[inputs]: Add giflib, libpng, and libtiff.
2016-10-27gnu: r: Use uname from GuixRoel Janssen
* gnu/packages/statistics.scm (r): Use uname from Guix.
2016-10-27gnu: python-urllib3: Update to 1.18.1.Marius Bakke
* gnu/packages/python.scm (python-urllib3): Update to 1.18.1. [home-page]: Use https URL.
2016-10-27gnu: Add mdadm-static.Ludovic Courtès
* gnu/packages/linux.scm (mdadm-static): New variable.
2016-10-27gnu: libmikmod: Update to 3.3.10.Efraim Flashner
* gnu/packages/sdl.scm (libmikmod): Update to 3.3.10.
2016-10-27gnu: sdl2: Update to 2.0.5.Efraim Flashner
* gnu/packages/sdl.scm (sdl2): Update to 2.0.5.
2016-10-27gnu: Use 'https' for libsdl urls.Efraim Flashner
* gnu/packages/sdl.scm (sdl, sdl2, sdl-image, sdl-mixer, sdl-net) (sdl-ttf, sdl2-image, sdl2-ttf)[source]: Use https. [home-page]: Use https.
2016-10-27gnu: mcelog: Update to 144.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (mcelog): Update to 144.
2016-10-27gnu: btrfs-progs: Update to 4.8.2.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (btrfs-progs): Update to 4.8.2.
2016-10-27gnu: gnupg: Add support for pcsc-lite.Mike Gerwitz
* gnu/packages/gnupg.scm (gnupg)[inputs]: Add pcsc-lite. [arguments]: Rename phase 'patch-config-files' to 'patch-paths'. Patch `scd/scdaemon.c' with absolute path of libpcsclite.so. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-10-27gnu: Add pcsc-lite.Mike Gerwitz
* gnu/packages/security-token.scm (pcsc-lite): New variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-10-27gnu: Add dbacl.ng0
* gnu/packages/textutils.scm (dbacl): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-10-27gnu: valgrind: Use 'modify-phases' syntax.Efraim Flashner
* gnu/packages/valgrind.scm (valgrind)[arguments]: Use 'modify-phases' syntax.
2016-10-27gnu: valgrind: Update to 3.12.0.Efraim Flashner
* gnu/packages/valgrind.scm (valgrind): Update to 3.12.0.
2016-10-27gnu: python-pathlib2: Add comment.Hartmut Goebel
As suggested by Efraim Flashner. * gnu/packages/python.scm (python-pathlib2): Add comment.
2016-10-26gnu: shotwell: Update to 0.25.0.Leo Famulari
* gnu/packages/gnome.scm (shotwell): Update to 0.25.0. [inputs]: Add gcr.
2016-10-26gnu: vdirsyncer: Update to 0.14.0.Leo Famulari
* gnu/packages/dav.scm (vdirsyncer): Update to 0.14.0.
2016-10-26gnu: Add lci.ng0
* gnu/packages/lolcode.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-10-26gnu: Add autossh.Christopher Allan Webber
* gnu/packages/ssh.scm (autossh): New variable.
2016-10-26gnu: r: Update to 3.3.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r): Update to 3.3.1.
2016-10-26gnu: r-matrixstats: Update to 0.51.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-matrixstats): Update to 0.51.0.
2016-10-26gnu: r-r-utils: Update to 2.4.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-r-utils): Update to 2.4.0.
2016-10-26gnu: r-irlba: Update to 2.1.2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-irlba): Update to 2.1.2.
2016-10-26gnu: r-codetools: Update to 0.2-15.Ricardo Wurmus
* gnu/packages/statistics.scm (r-codetools): Update to 0.2-15.
2016-10-26gnu: r-snow: Update to 0.4-2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-snow): Update to 0.4-2.
2016-10-26gnu: r-backports: Update to 1.0.4.Ricardo Wurmus
* gnu/packages/statistics.scm (r-backports): Update to 1.0.4.
2016-10-26gnu: r-foreign: Update to 0.8-67.Ricardo Wurmus
* gnu/packages/statistics.scm (r-foreign): Update to 0.8-67.
2016-10-26gnu: r-cluster: Update to 2.0.5.Ricardo Wurmus
* gnu/packages/statistics.scm (r-cluster): Update to 2.0.5.
2016-10-26gnu: r-acepack: Update to 1.4.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-acepack): Update to 1.4.0.
2016-10-26gnu: r-r6: Update to 2.2.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-r6): Update to 2.2.0.
2016-10-26gnu: r-evaluate: Update to 0.10.Ricardo Wurmus
* gnu/packages/statistics.scm (r-evaluate): Update to 0.10.
2016-10-26gnu: r-reshape2: Update to 1.4.2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-reshape2): Update to 1.4.2.
2016-10-26gnu: r-stringi: Update to 1.1.2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-stringi): Update to 1.1.2.
2016-10-26gnu: r-matrix: Update to 1.2-7.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-matrix): Update to 1.2-7.1.
2016-10-26gnu: r-colorspace: Update to 1.2-7.Ricardo Wurmus
* gnu/packages/statistics.scm (r-colorspace): Update to 1.2-7.
2016-10-26gnu: r-jsonlite: Update to 1.1.Ricardo Wurmus
* gnu/packages/web.scm (r-jsonlite): Update to 1.1.
2016-10-26gnu: r-curl: Update to 2.2.Ricardo Wurmus
* gnu/packages/web.scm (r-curl): Update to 2.2.
2016-10-26gnu: r-seqinr: Update to 3.3-3.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-seqinr): Update to 3.3-3.
2016-10-26gnu: r-rcpparmadillo: Update to 0.7.500.0.0.Ricardo Wurmus
* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to 7.500.0. * gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.500.0.0.
2016-10-26gnu: armadillo: Update to 7.500.0.Ricardo Wurmus
* gnu/packages/maths.scm (armadillo): Update to 7.500.0.
2016-10-26gnu: r-rmarkdown: Update to 1.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.1. [propagated-inputs]: Add r-evaluate, r-tibble.
2016-10-26gnu: bioperl-minimal: Update to 1.7.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (bioperl-minimal): Update to 1.7.0.
2016-10-26gnu: mupdf: Modify CVE-2016-8674 patch to apply to 1.9a.Marius Bakke
The fix from upstream did not apply cleanly due to many context changes. This was adapted by cloning mupdf 1.9a from git and fixing conflicts after applying our patches and cherry-picking upstream commit 1e03c06. This is a follow-up to 47a04fca999b91309d196afc9ebf4d8ac6f2083f. * gnu/packages/patches/mupdf-CVE-2016-8674.patch: Adapt to 1.9a.
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