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2017-07-22gnu: r-genomicranges: Update to 1.28.4.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.28.4.
2017-07-22gnu: Remove python-fake-factory leftovers.Marius Bakke
This is a followup to c799eb2eb8b1a820147af96988eddaa9f752994b. * gnu/packages/patches/python-fake-factory-fix-build-32bit.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2017-07-22gnu: Remove python-fake-factory.Marius Bakke
Superseded by python-faker since ce7911ddae5d30ba73c8c9552b7d4e71268e5db3. * gnu/packages/python.scm (python-fake-factory, python2-fake-factory): Remove variables.
2017-07-22gnu: python-pyopenssl: Update to 17.2.0.Marius Bakke
* gnu/packages/patches/python-pyopenssl-17.1.0-test-overflow.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/python.scm (python-pyopenssl, python2-pyopenssl): Update to 17.2.0. [native-inputs]: Add PYTHON-FLAKY. [source](patches): Remove.
2017-07-22gnu: Add python-flaky.Marius Bakke
* gnu/packages/python.scm (python-flaky, python2-flaky): New variables.
2017-07-22gnu: maim: Update to 5.4.64.Marius Bakke
* gnu/packages/xdisorg.scm (maim): Update to 5.4.64.
2017-07-22gnu: slop: Update to 6.3.47.Marius Bakke
* gnu/packages/xdisorg.scm (slop): Update to 6.3.47. [inputs]: Add GLEW.
2017-07-22gnu: parallel: Update to 20170722.Tobias Geerinckx-Rice
* gnu/packages/parallel.scm (parallel): Update to 20170722.
2017-07-22gnu: font-gnu-unifont: Update to 10.0.05.Tobias Geerinckx-Rice
* gnu/packages/fonts.scm (font-gnu-unifont): Update to 10.0.05.
2017-07-22gnu: nano: Update to 2.8.6.Tobias Geerinckx-Rice
* gnu/packages/nano.scm (nano): Update to 2.8.6.
2017-07-22gnu: acct: Update to 6.6.4.Tobias Geerinckx-Rice
* gnu/packages/acct.scm (acct): Update to 6.6.4.
2017-07-22gnu: Add conda.Muriithi Frederick Muriuki
* gnu/packages/package-management.scm (conda): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-07-22gnu: Add python-conda.Muriithi Frederick Muriuki
* gnu/packages/package-management.scm (python-conda, python2-conda): New variables. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-07-22gnu: Add python-anaconda-client.Muriithi Frederick Muriuki
* gnu/packages/package-management.scm (python-anaconda-client, python2-anaconda-client): New variables. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-07-22gnu: Add python-clyent.Muriithi Frederick Muriuki
* gnu/packages/python.scm (python-clyent, python2-clyent): New variables.
2017-07-22gnu: Update python-pytz to 2017.2.Muriithi Frederick Muriuki
* gnu/packages/python.scm (python-pytz, python2-pytz): Update to 2017.2. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-07-22gnu: man-pages: Update to 4.12.Tobias Geerinckx-Rice
* gnu/packages/man.scm (man-pages): Update to 4.12.
2017-07-21gnu: tint2: Update to 0.14.6.Eric Bavier
* gnu/packages/xdisorg.scm (tint2): Update to 0.14.6.
2017-07-21gnu: icedtea@3: Update to 3.5.0 [security fixes].Leo Famulari
Fixes CVE-2017-{10053,10067,10074,10074,10078,10081,10087,10089,10090,10096, 10101,10102,10107,10108,10109,10110,10111,10115,10116,10118,10135,10176,10193, 10198}. * gnu/packages/java.scm (icedtea-8): Update to 3.5.0.
2017-07-21gnu: vim: Update to 8.0.0727 [fixes CVE-2017-11109].Leo Famulari
* gnu/packages/vim.scm (vim): Update to 8.0.0727. (vim-full)[source]: Add field and hold back at version 8.0.0600.
2017-07-21gnu: mysql: Update to 5.7.19.Leo Famulari
* gnu/packages/databases.scm (mysql): Update to 5.7.19.
2017-07-21gnu: libpsl: Update to 0.18.0.Tobias Geerinckx-Rice
* gnu/packages/web.scm (libpsl): Update to 0.18.0. [native-inputs]: Add pkg-config. [inputs]: Replace icu4c with libidn2; add libunistring.
2017-07-21gnu: borg: Update to 1.0.11.Leo Famulari
* gnu/packages/backup.scm (borg): Update to 1.0.11.
2017-07-20gnu: bitcoin-core: Actually build the graphical client.Leo Famulari
* gnu/packages/finance.scm (bitcoin-core)[inputs]: Replace qtbase with qt.
2017-07-20gnu: heimdal: Fix CVE-2017-{6594,11103}.Alex Vong
* gnu/packages/patches/heimdal-CVE-2017-6594.patch, gnu/packages/patches/heimdal-CVE-2017-11103.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/kerberos.scm (heimdal)[source]: Use them.
2017-07-20gnu: Add bmon.Arun Isaac
* gnu/packages/networking.scm (bmon): New variable.
2017-07-20gnu: texlive-latex-mdwtools: Fix syntax error in description.Ricardo Wurmus
* gnu/packages/tex.scm (texlive-latex-mdwtools)[description]: Fix texinfo syntax error.
2017-07-20gnu: texlive-latex-environ: Fix invalid texinfo markup.Ricardo Wurmus
* gnu/packages/tex.scm (texlive-latex-environ)[description]: Fix texinfo syntax errors.
2017-07-20gnu: Add mksh.Arun Isaac
* gnu/packages/shells.scm (mksh): New variable.
2017-07-20gnu: Remove a left-over patch.Leo Famulari
This is a followup to commit 426b0b898f70a58133d80779980f163a5761686e. * gnu/packages/patches/pcre-CVE-2017-7186.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2017-07-20gnu: pcre: Update replacement to 8.41 [fixes CVE-2017-{7244,7245,7246}].Leo Famulari
* gnu/packages/pcre.scm (pcre)[replacement]: Update to pcre-8.41. (pcre/fixed): Replace with ... (pcre-8.41): ... new variable.
2017-07-20gnu: Add premake4.Oleg Pykhalov
* gnu/packages/build-tools.scm (premake4): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-07-20gnu: Add java-commons-cli@1.2.Gábor Boskovits
* gnu/packages/java.scm(java-commons-cli-1.2): New variable. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2017-07-20gnu: Update g-wrap to use guile-2.2.Theodoros Foradis
* gnu/packages/guile.scm (g-wrap): [propagated-inputs]: Use guile-2.2. [arguments]: Add "--disable-Werror" to configure-flags. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-07-20gnu: Add eolie.Ricardo Wurmus
* gnu/packages/gnome.scm (eolie): New variable.
2017-07-20gnu: perl-html-template: Update to 2.97.Tobias Geerinckx-Rice
* gnu/packages/web.scm (perl-html-template): Update to 2.97.
2017-07-20gnu: openh264: Update to 1.7.0.Tobias Geerinckx-Rice
* gnu/packages/video.scm (openh264): Update to 1.7.0.
2017-07-20gnu: gnome-mpv: Update to 0.12.Tobias Geerinckx-Rice
* gnu/packages/video.scm (gnome-mpv): Update to 0.12.
2017-07-20gnu: Add 0xffff.Jonathan Brielmaier
* gnu/packages/flashing-tools.scm (0xffff): New variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-07-20gnu: Add libusb@0.1.Jonathan Brielmaier
* gnu/packages/libusb.scm (libusb-0.1): New variable. * gnu/packages/patches/libusb-0.1-disable-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-07-20gnu: lapack: Fix hash of release 3.7.1Maxim Cournoyer
Apparently the release was modified (cleaned-up) in-place. An issue was opened at https://github.com/Reference-LAPACK/lapack-release/issues/4. * gnu/packages/maths.scm (lapack): Fix sha256 hash. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-07-20gnu: qsyncthingtray: Update to 0.5.8.Tobias Geerinckx-Rice
* gnu/packages/sync.scm (qsyncthingtray): Update to 0.5.8.
2017-07-20gnu: dub: Update to 1.4.0.Tobias Geerinckx-Rice
* gnu/packages/ldc.scm (dub): Update to 1.4.0.
2017-07-19gnu: Add python-sphinx-1.6.Ricardo Wurmus
* gnu/packages/python.scm (python-sphinx-1.6): New variable.
2017-07-19gnu: Add python-sphinxcontrib-websupport.Ricardo Wurmus
* gnu/packages/python.scm (python-sphinxcontrib-websupport): New variable.
2017-07-19gnu: Add python-xapian-bindings.Ricardo Wurmus
* gnu/packages/search.scm (python-xapian-bindings): New variable.
2017-07-19gnu: graphicsmagick: Update to 1.3.26.Leo Famulari
* gnu/packages/imagemagick.scm (graphicsmagick): Update to 1.3.26. [source]: Use url-fetch and add SourceForge URL. Remove snippet.
2017-07-19gnu: mpv: Update to 0.26.0.Leo Famulari
* gnu/packages/video.scm (mpv): Update to 0.26.0.
2017-07-19gnu: r-bsgenome-hsapiens-ucsc-hg19: Update hash.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-bsgenome-hsapiens-ucsc-hg19)[source]: Update hash because the tarball changed in place.
2017-07-19gnu: snakemake: Update to 3.13.3.Ricardo Wurmus
* gnu/packages/python.scm (snakemake): Update to 3.13.3.
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