Age | Commit message (Collapse) | Author |
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* gnu/packages/cran.scm (r-shinytree): New variable.
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* gnu/packages/javascript.scm (js-requirejs): New variable.
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* gnu/packages/bioconductor.scm (r-reqon): New variable.
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* gnu/packages/bioconductor.scm (r-seqbias): New variable.
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* gnu/packages/bioconductor.scm (r-affycoretools): New variable.
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* gnu/packages/bioconductor.scm (r-oligoclasses): New variable.
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* gnu/packages/bioconductor.scm (r-reportingtools): New variable.
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* gnu/packages/bioconductor.scm (r-pfam-db): New variable.
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* gnu/packages/bioconductor.scm (r-affycontam): New variable.
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* gnu/packages/bioconductor.scm (r-affycompatible): New variable.
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* gnu/packages/bioconductor.scm (r-affycomp): New variable.
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* gnu/packages/bioconductor.scm (r-affydata): New variable.
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* gnu/packages/bioconductor.scm (r-timeseriesexperiment): New variable.
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* gnu/packages/bioconductor.scm (r-wavcluster): New variable.
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* gnu/packages/cran.scm (r-spam): Update to 2.3-0.
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* gnu/packages/cran.scm (r-feather): Update to 0.3.5.
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* gnu/packages/emacs-xyz.scm (emacs-zerodark-theme): Update to 4.6.
[source]: Update to new source uri.
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* gnu/packages/authentication.scm (yubico-pam): New variable.
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* gnu/packages/bioinformatics.scm (r-delayedmatrixstats): Update to 1.6.1.
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* gnu/packages/bioinformatics.scm (r-rhdf5lib): Update to 1.6.1.
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* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.44.4.
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* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.36.1.
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* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.22.1.
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* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.8.4.
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* gnu/packages/bioconductor.scm (r-gtrellis): Update to 1.16.1.
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* gnu/packages/bioconductor.scm (r-regioner): Update to 1.16.4.
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* gnu/packages/emacs-xyz.scm (emacs-elixir-mode): New variable.
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* gnu/packages/wine.scm (wine-staging-patchset-data): Update to 4.16.
* gnu/packages/wine.scm (wine-staging): Update to 4.16.
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* gnu/packages/statistics.scm (r-tidyr): Update to 1.0.0.
[propagated-inputs]: Add r-ellipsis, r-lifecycle, and r-vctrs.
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* gnu/packages/graph.scm (r-diffusionmap): Update to 1.2.0.
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* gnu/packages/cran.scm (r-seqinr): Update to 3.6-1.
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* gnu/packages/cran.scm (r-lifecycle): New variable.
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* gnu/packages/cran.scm (r-huge): Update to 1.3.3.
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* gnu/packages/cran.scm (r-tidytree): Update to 0.2.7.
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* gnu/packages/cran.scm (r-activity): Update to 1.3.
[propagated-inputs]: Add r-insol.
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* gnu/packages/cran.scm (r-sjplot): Update to 2.7.1.
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* gnu/packages/cran.scm (r-sjstats): Update to 0.17.6.
[propagated-inputs]: Add r-parameters.
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* gnu/packages/cran.scm (r-emmeans): Update to 1.4.1.
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* gnu/packages/cran.scm (r-sjlabelled): Update to 1.1.1.
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* gnu/packages/cran.scm (r-circlize): Update to 0.4.8.
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* gnu/packages/cran.scm (r-httpuv): Update to 1.5.2.
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* gnu/packages/cran.scm (r-insol): New variable.
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* gnu/packages/cran.scm (r-rgdal): New variable.
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* gnu/packages/cran.scm (r-parameters): New variable.
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This fixes bug#37069.
* gnu/packages/games.scm (gnujump)[arguments]: Add custom
'create-desktop-entry phase to install a desktop file.
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* gnu/packages/patches/tipp10-fix-compiling.patch: Remove changes to
hardcode executable path.
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This addresses a 'guix lint' warning.
* gnu/packages/maths.scm (gmsh)[home-page]: Update to avoid URL
redirection.
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* gnu/packages/guile-xyz.scm (mcron): Update to 1.1.2.
[arguments]: Remove custom 'set-timezone phase.
[native-inputs]: Add autoconf, automake, help2man, texinfo.
[inputs]: Remove ed, which.
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* gnu/packages/shellutils.scm: Sort module inputs alphabetically.
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* gnu/packages/shellutils.scm (zsh-autosuggestions): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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