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2015-06-12gnu: Add rtmidi.Ricardo Wurmus
* gnu/packages/audio.scm (rtmidi): New variable.
2015-06-12gnu: Add pugixml.Ricardo Wurmus
* gnu/packages/xml.scm (pugixml): New variable.
2015-06-12gnu: Add RapidJSON.Ricardo Wurmus
* gnu/packages/web.scm (rapidjson): New variable.
2015-06-12gnu: Add withershins.Ricardo Wurmus
* gnu/packages/code.scm (withershins): New variable.
2015-06-12install: Use udev rules for device-mapper.Ludovic Courtès
Fixes <http://bugs.gnu.org/20791>. Reported by Benz Schenk <benz.schenk@uzh.ch>. * gnu/system/install.scm (installation-services): Add #:rules argument for 'udev-service'.
2015-06-12gnu: Add OrfM.Ben Woodcroft
* gnu/packages/bioinformatics.scm (orfm): New variable. Signed-off-by: Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de>
2015-06-12gnu: icedtea7: Bootstrap with GCJ.Ricardo Wurmus
* gnu/packages/java.scm (icedtea7): Bootstrap with GCJ rather than compile with IcedTea6.
2015-06-12gnu: Add Couger.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (couger): New variable.
2015-06-12gnu: Add randomjungle.Ricardo Wurmus
* gnu/packages/machine-learning.scm (randomjungle): New variable.
2015-06-12gnu: Add python-libsvm.Ricardo Wurmus
* gnu/packages/machine-learning.scm (python-libsvm): New variable.
2015-06-12gnu: Add libsvm.Ricardo Wurmus
* gnu/packages/machine-learning.scm: New file. * gnu-system.am (GNU_SYSTEM_MODULES): Add it.
2015-06-12gnu: ngs-sdk: Update to version 1.1.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (ngs-sdk): Update to version 1.1.1.
2015-06-11gnu: ghc: Patch runtime references to /bin/sh.Eric Bavier
* gnu/packages/haskell.scm (ghc)[arguments]: Rename 'unpack-and-fix-testsuite' phase to 'unpack-testsuite-and-fix-bins'. Patch source files that reference /bin/sh.
2015-06-12Revert "gnu: openssl: Update to 1.0.2b."Mark H Weaver
This reverts commit 4f467e33de0b64b1afd935d14ec6a4839e03bdfc.
2015-06-12gnu: openssl: Update to 1.0.2b.Mark H Weaver
* gnu/packages/openssl.scm (openssl): Update to 1.0.2b.
2015-06-11gnu: guix: Update snapshot.Ludovic Courtès
* gnu/packages/package-management.scm (guix-devel): Update to a43b55f. [source]: Add 'file-name' field. [native-inputs]: Add HELP2MAN.
2015-06-11packages: Make 'location' field innate.Ludovic Courtès
* guix/packages.scm (<package>)[location]: Add 'innate' property. * guix/build-system/gnu.scm (static-package): Remove 'loc' parameter and 'location' field. * gnu/packages/autotools.scm (autoconf-wrapper): Remove 'location' field. * gnu/packages/commencement.scm (gnu-make-boot0, diffutils-boot0, gcc-final): Likewise. * gnu/packages/cross-base.scm (cross): Likewise. * gnu/packages/emacs.scm (emacs-no-x, emacs-no-x-toolkit): Likewise. * gnu/packages/make-bootstrap.scm (tarball-package): Likewise. * gnu/packages/maths.scm (petsc-complex): Likewise.
2015-06-11gnu: gnupg: Update to 2.1.5.Mark H Weaver
* gnu/packages/gnupg.scm (gnupg): Update to 2.1.5.
2015-06-11gnu: Add librest.宋文武
* gnu/packages/gnome.scm (librest): New variable.
2015-06-11gnu: inetutils: Update to 1.9.4.Mark H Weaver
* gnu/packages/admin.scm (inetutils): Update to 1.9.4.
2015-06-10gnu: qemu: Add fix for CVE-2015-3209.Mark H Weaver
* gnu/packages/patches/qemu-CVE-2015-3209.patch: New file. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/qemu.scm (qemu): Add patch.
2015-06-10gnu: cups: Update to 2.0.3.Mark H Weaver
* gnu/packages/cups.scm (cups): Update to 2.0.3.
2015-06-10gnu: linux-libre: Update to 4.0.5.Mark H Weaver
* gnu/packages/linux.scm (linux-libre): Update to 4.0.5.
2015-06-10install: Really overwrite TARGET/var/guix/profiles/system-1-link.Ludovic Courtès
* gnu/build/install.scm (populate-root-file-system): Delete system-1-link under TARGET, not under /. Use 'catch' and check for EEXIST instead of (false-if-exception (delete-file ...)).
2015-06-09gnu: mysql: Update to 5.6.25.宋文武
* gnu/packages/databases.scm (mysql): Update to 5.6.25. [source]: Use 'version-major+minor'. [build-system]: Change to cmake-build-system. Adjust arguments accordingly. [inputs]: Add libaio. Remove procps. Move perl to 'native-inputs'.
2015-06-08gnu: Add proof-general.Mark H Weaver
* gnu/packages/ocaml.scm (proof-general): New variable.
2015-06-08install: Omit /root from the binary tarball.Ludovic Courtès
Suggested by Thomas Schwinge <thomas@codesourcery.com>. * gnu/system/install.scm (self-contained-tarball): Remove "/root/.guix-profile" from the 'tar' arguments. * doc/guix.texi (Binary Installation): Add a step to create ~root/.guix-profile.
2015-06-08gnu: youtube-dl: Update to 2015.06.04.1.Mark H Weaver
* gnu/packages/video.scm (youtube-dl): Update to 2015.06.04.1.
2015-06-08gnu: evince: Update to 3.16.1, add more inputs.宋文武
* gnu/packages/gnome.scm (evince): Update to 3.16.1. [inputs]: Add djvulibre, libtiff, gnome-desktop and libsecret. Co-authored-by: David Hashe <david.hashe@dhashe.com>
2015-06-08gnu: geoclue: Update to 2.2.0.宋文武
* gnu/packages/gnome.scm (geoclue): Update to 2.2.0.
2015-06-07gnu: python-numpy: Build against OpenBLAS.Ricardo Wurmus
* gnu/packages/python.scm (python-numpy)[inputs]: Use "openblas" instead of "atlas". * gnu/packages/python.scm (python-numpy)[arguments]: Configure build against OpenBLAS. Modified-By: Mark H Weaver <mhw@netris.org>
2015-06-06gnu: icecat: Update to 31.7.0-gnu1.Mark H Weaver
* gnu/packages/patches/icecat-CVE-2015-0797.patch, gnu/packages/patches/icecat-CVE-2015-2708-pt1.patch, gnu/packages/patches/icecat-CVE-2015-2708-pt2.patch, gnu/packages/patches/icecat-CVE-2015-2708-pt3.patch, gnu/packages/patches/icecat-CVE-2015-2708-pt4.patch, gnu/packages/patches/icecat-CVE-2015-2710-pt1.patch, gnu/packages/patches/icecat-CVE-2015-2710-pt2.patch, gnu/packages/patches/icecat-CVE-2015-2710-pt3.patch, gnu/packages/patches/icecat-CVE-2015-2713-pt1.patch, gnu/packages/patches/icecat-CVE-2015-2713-pt2.patch, gnu/packages/patches/icecat-CVE-2015-2716.patch: Remove files. * gnu-system.am (dist_patch_DATA): Remove them. * gnu/packages/gnuzilla.scm (icecat): Update to 31.7.0-gnu1. Remove patches.
2015-06-06gnu: tor: Update to 0.2.6.8.Mark H Weaver
* gnu/packages/tor.scm (tor): Update to 0.2.6.8. [native-inputs]: Add python-2.
2015-06-05system: 'hosts-file' is now a file-like object.Ludovic Courtès
Partly fixes <http://bugs.gnu.org/20720>. Reported by Alex Kost <alezost@gmail.com>. * gnu/system.scm (default-/etc/hosts): Change 'text-file' to 'plain-file'. (maybe-file->monadic): New procedure. (operating-system-etc-directory): Use it. * doc/guix.texi (operating-system Reference, Networking Services): Adjust accordingly.
2015-06-05system: 'sudoers' is now a file-like object.Ludovic Courtès
Partly fixes <http://bugs.gnu.org/20720> Reported by Alex Kost <alezost@gmail.com>. * gnu/system.scm (etc-directory): Change default #:sudoers value to a 'plain-file'. Don't bind it. Remove #~#$. (maybe-string->file): New procedure. (operating-system-etc-directory): Use it. (%sudoers-specification): Use 'plain-file'. * doc/guix.texi (operating-system Reference): Adjust accordingly.
2015-06-05gnu: Add magit-svn.Ludovic Courtès
* gnu/packages/emacs.scm (magit-svn): New variable.
2015-06-05gnu: Add coq.Mark H Weaver
* gnu/packages/ocaml.scm (coq): New variable.
2015-06-05gnu: Add hevea.Mark H Weaver
* gnu/packages/ocaml.scm (hevea): New variable.
2015-06-05gnu: Add camlp5.Mark H Weaver
* gnu/packages/ocaml.scm (camlp5): New variable.
2015-06-05gnu: ocaml: Update to 4.02.1.Mark H Weaver
* gnu/packages/ocaml.scm (ocaml)[version]: Update to 4.02.1. [source]: Use 'version-major+minor'. Use .xz tarball. [home-page]: Update URI. [license]: gpl2 -> lgpl2.0. [inputs]: Add libx11, gcc:lib, and zlib. Remove perl. [native-inputs]: New field, with perl and pkg-config. [arguments]: In #:modules, remove (srfi srfi-1), add (web server). Use 'modify-phases'. Enable parallel build. Add 'patch-/bin/sh-references' and 'prepare-socket-test' phases. Rename 'check-after-install' phase to 'check'. Use 'with-directory-excursion' in 'check' phase. Remove unused keyword arguments from custom phases.
2015-06-05gnu: Add devhelp.宋文武
* gnu/packages/gnome.scm (devhelp): New variable.
2015-06-05gnu: guile-opengl: Patch dynamic-link call for 'libGLU' to glu.宋文武
* gnu/packages/gl.scm (guile-opengl)[inputs]: Add glu. [arguments]: Patch dynamic-link call for 'libGLU' to glu instead of mesa in the 'patch-dynamic-link' phase.
2015-06-04gnu: Add LibreOffice.Andreas Enge
* gnu/packages/libreoffice.scm (xmlsec-src-libreoffice, libreoffice): New variables. Co-authored-by: John Darrington <jmd@gnu.org>
2015-06-03gnu: guile-reader: Update to 0.6.1.Ludovic Courtès
* gnu/packages/guile.scm (guile-reader)[source, version]: Update to 0.6.1. [arguments]: Remove #:locale argument.
2015-06-03gnu: Add Data::Stag.Ricardo Wurmus
* gnu/packages/perl.scm (perl-data-stag): New variable.
2015-06-03gnu: Add IO::String.Ricardo Wurmus
* gnu/packages/perl.scm (perl-io-string): New variable.
2015-06-02gnu: gnupg-2.0: Update to 2.0.28.Mark H Weaver
* gnu/packages/gnupg.scm (gnupg-2.0): Update to 2.0.28.
2015-06-02gnu: gnu-pw-mgr: Update to 1.4.Mark H Weaver
* gnu/packages/gnu-pw-mgr.scm (gnu-pw-mgr): Update to 1.4. Use .xz tarball. Move 'which' to native-inputs. Add 'autogen' to native-inputs.
2015-06-02gnu: sharutils: Update to 4.15.2.Mark H Weaver
* gnu/packages/compression.scm (sharutils): Update to 4.15.2.
2015-06-02gnu: Add HTSlib.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (htslib): New variable.
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