Age | Commit message (Collapse) | Author |
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Add CMake version 3.15.5 but do not replace the existing version to avoid
triggering the rebuild of all CMake-based packages.
See <https://issues.guix.gnu.org/issue/38060>.
* gnu/packages/cmake.scm (cmake-3.15.5): Add CMake 3.15.5.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
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* gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for
Chromium 78.
(%chromium-version): Set to 78.0.3904.97.
(%ungoogled-revision): Set to acaf16383f264d8a2f24142ad054c9b4355771d3.
(%debian-revision): Set to e43d74632091324774a5049668782dba7b09cf72.
(%chromium-origin, %ungoogled-origin, %debian-origin): Update hashes.
(gentoo-patches, %auxiliary-patches): Remove variables.
(ungoogled-chromium-source): Adjust Debian patches for 78. Don't apply
%AUXILIARY-PATCHES.
(libvpx/chromium): New variable.
(ungoogled-chromium)[arguments]: Add substitution for ICU headers. Adjust
other substitutions for 78. Remove obsolete workaround. Increase ulimit in
'build' phase. Don't install '22x22' icon, which no longer exists.
[inputs]: Change from LIBVPX to LIBVPX/CHROMIUM.
[properties]: Remove HIDDEN?.
(ungoogled-chromium-wayland)[inputs]: Don't remove inherited inputs.
(ungoogled-chromium-is-deprecated, ungoogled-chromium-wayland-is-deprecated):
Remove variables.
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* gnu/packages/build-tools.scm (gn)[arguments]: Remove #:tests?. Override
'check' phase.
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* gnu/packages/build-tools.scm (gn): Update to 0.0-1666.6e5ba2e.
[arguments]: Do not override LDFLAGS.
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This allows us to get better performance by default on machines with
OmniPath hardware.
* gnu/packages/patches/openmpi-psm2-priority.patch: New file.
* gnu/packages/mpi.scm (openmpi)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
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* gnu/packages/linux.scm (psm)[outputs]: New field.
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* gnu/packages/mpi.scm (openmpi)[inputs]: Switch to HWLOC-2.
* gnu/packages/parallel.scm (slurm)[inputs]: Likewise.
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* gnu/packages/mpi.scm (hwloc-2.0): Rename to...
(hwloc-2): ... this. Update to 2.1.0
(hwloc-2.0): Define as deprecated.
* gnu/packages/opencl.scm (pocl)[inputs]: Adjust accordingly.
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* gnu/packages/parallel.scm (slurm)[arguments]: Pass "--disable-static".
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* gnu/packages/parallel.scm (slurm): Update to 19.05.3-2.
[source](snippet): Keep "contribs/mpi" and its reference in
'Makefile.am'.
[inputs]: Remove OPENSSL.
[arguments]: Remove "--with-ssl". Add 'install-libpmi' phase.
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* gnu/packages/mpi.scm (intel-mpi-benchmarks): New variable.
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* gnu/packages/linux.scm (rdma-core): Update to 26.0.
[arguments]: Add "-DRST2MAN_EXECUTABLE=..." to #:configure-flags.
[native-inputs]: Add PYTHON-DOCUTILS.
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* gnu/packages/linux.scm (rdma-core)[arguments]: Add "-DIOCTL_MODE=write"
to #:configure-flags.
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* gnu/packages/mpi.scm (openmpi)[arguments]: Pass "--with-ucx",
"--with-psm", and "--with-psm2".
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* gnu/packages/fabric-management.scm (ucx)[arguments]: Pass
"--disable-static".
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Until now, InfiniBand support was missing, as reported by "ucx_info -d"
on a machine with InfiniBand networking.
* gnu/packages/fabric-management.scm (ucx)[arguments]: Build with
"--with-verbs".
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* gnu/packages/haskell-apps.scm (git-annex): Update to 7.20191114.
Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
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* gnu/packages/audio.scm (rtmidi): Update to 4.0.0.
[source]: Download tarball from upstream URL rather than the powertab github
fork.
[arguments]: Enable tests. Remove 'build and 'install phases and add a new
'noconfigure phase to prevent the bootstrap script from invoking configure.
[home-page]: Update homepage to upstream URL.
* gnu/packages/music.scm (powertabeditor)[arguments]: Add phase that substitutes
the rtmidi #include directive to find the header.
Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
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* gnu/packages/engineering.scm (freecad): Update to 0.18.4.
Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
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* gnu/packages/emacs-xyz.scm (emacs-flycheck-cpplint)[inputs]: Add cpplint.
[arguments]: Add a set-cpplint-path phase to set the path of cpplint.
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* gnu/packages/cpp.scm (cpplint): New variable.
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* gnu/packages/audio.scm (fluidsynth): Update to 2.0.9.
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* gnu/packages/perl.scm (perl-type-tiny): Update to 1.006000.
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* gnu/packages/package-management.scm (msitools): Update to 0.100.
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* gnu/packages/mail.scm (perl-mail-dkim): Update to 0.58.
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* gnu/packages/mes.scm (m2-planet): New variable.
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* gnu/packages/emacs-xyz.scm (emacs-helm-fish-completion): New variable.
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* gnu/packages/bioinformatics.scm (r-gprofiler): Update to 0.7.0.
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* gnu/packages/statistics.scm (r-hexbin): Update to 1.28.0.
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* gnu/packages/statistics.scm (r-r-oo): Update to 1.23.0.
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* gnu/packages/statistics.scm (r-glmnet): Update to 3.0.
[inputs]: Move gfortran from here...
[native-inputs]: ...to here.
[propagated-inputs]: Add r-shape.
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* gnu/packages/statistics.scm (r-dt): Update to 0.10.
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* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.17.
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* gnu/packages/statistics.scm (r-hms): Update to 0.5.2.
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* gnu/packages/statistics.scm (r-roxygen2): Update to 7.0.0.
[propagated-inputs]: Add r-rlang.
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* gnu/packages/statistics.scm (r-r6): Update to 2.4.1.
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* gnu/packages/statistics.scm (r-testthat): Update to 2.3.0.
[propagated-inputs]: Add r-ellipsis and r-pkgload.
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* gnu/packages/statistics.scm (r-knitr): Update to 1.26.
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* gnu/packages/statistics.scm (r-survival): Update to 3.1-7.
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* gnu/packages/cran.scm (r-farver): Update to 2.0.1.
[propagated-inputs]: Remove r-rcpp.
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* gnu/packages/cran.scm (r-ggeffects): Update to 0.13.0.
[propagated-inputs]: Remove r-scales.
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* gnu/packages/cran.scm (r-learnr): Update to 0.10.0.
[propagated-inputs]: Add r-checkmate, r-ellipsis, and r-renv.
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* gnu/packages/cran.scm (r-ggfortify): Update to 0.4.8.
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* gnu/packages/cran.scm (r-kernlab): Update to 0.9-29.
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* gnu/packages/cran.scm (r-bookdown): Update to 0.15.
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* gnu/packages/cran.scm (r-future): Update to 1.15.0.
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* gnu/packages/cran.scm (r-rbamtools): Update to 2.16.17.
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* gnu/packages/cran.scm (r-fields): Update to 10.0.
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* gnu/packages/cran.scm (r-spam): Update to 2.4-0.
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