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2023-01-12gnu: rust-serde-json-1: Update to 1.0.91.Efraim Flashner
* gnu/packages/crates-io.scm (rust-serde-json-1): Update to 1.0.91. [cargo-development-inputs]: Add rust-indoc-1, rust-ref-cast-1, rust-serde-1.
2023-01-12gnu: rust-serde-bytes-0.11: Update to 0.11.8.Efraim Flashner
* gnu/packages/crates-io.scm (rust-serde-bytes-0.11): Update to 0.11.8. [arguments]: Don't skip build.
2023-01-12gnu: rust-serde-big-array-0.3: Update to 0.3.3.Efraim Flashner
* gnu/packages/crates-io.scm (rust-serde-big-array-0.3): Update to 0.3.3. [cargo-inputs]: Move rust-serde-derive-1 ... [cargo-development-inputs]: ... to here.
2023-01-12gnu: rust-trybuild-1: Update to 1.0.75.Efraim Flashner
* gnu/packages/crates-io.scm (rust-trybuild-1): Update to 1.0.75.
2023-01-12gnu: rust-link-cplusplus-1: Update to 1.0.8.Efraim Flashner
* gnu/packages/crates-io.scm (rust-link-cplusplus-1): Update to 1.0.8.
2023-01-12gnu: rust-cxx-1: Update to 1.0.86.Efraim Flashner
* gnu/packages/crates-io.scm (rust-cxx-1, rust-cxxbridge-flags-1, rust-cxxbridge-macro-1): Update to 1.0.86. (rust-cxx-build-1): Update to 1.0.86. [cargo-development-inputs]: Add rust-cxx-1. (rust-cxx-gen-0.7): Update to 0.7.86. [cargo-inputs]: Remove rust-cc-1.
2023-01-12gnu: rust-codespan-reporting-0.11: Update to 0.11.1.Efraim Flashner
* gnu/packages/crates-io.scm (rust-codespan-reporting-0.11): Update to 0.11.1. [arguments]: Don't skip build. [cargo-development-inputs]: Add rust-anyhow-1, rust-insta-1, rust-lazy-static-1, rust-peg-0.6, rust-rustline-6, rust-structopt-0.3, rust-unindent-0.1.
2023-01-12gnu: rust-nom-6: Update to 6.2.1.Efraim Flashner
* gnu/packages/crates-io.scm (rust-nom-6): Update to 6.2.1. [snippet]: Add snippet to not limit rust-memchr-2 to versions under 2.4.0. [cargo-inputs]: Add rust-funty-1.
2023-01-12gnu: rust-nom-7: Update to 7.1.2.Efraim Flashner
* gnu/packages/crates-io.scm (rust-nom-7): Update to 7.1.2. [cargo-inputs]: Remove rust-version-check-0.9. [cargo-development-inputs]: Remove rust-criterion-0.3, rust-jemallocator-0.3. [arguments]: Remove phase setting location of libjemalloc_pic.a. [native-inputs]: Remove jemalloc. (rust-n0m-6)[native-inputs]: Explicitly add jemalloc.
2023-01-12gnu: rust-memchr-2: Update to 2.5.0.Efraim Flashner
* gnu/packages/crates-io.scm (rust-memchr-2): Update to 2.5.0. [arguments]: Don't skip tests. [cargo-inputs]: Add rust-compiler-builtins-0.1, rust-rustc-std-workspace-core-1. [cargo-development-inputs]: Add rust-quickcheck-1.
2023-01-12gnu: rust-serde-derive-1: Update to 1.0.152.Efraim Flashner
* gnu/packages/crates-io.scm (rust-serde-derive-1): Update to 1.0.152.
2023-01-12gnu: rust-serde-1: Update to 1.0.152.Efraim Flashner
* gnu/packages/crates-io.scm (rust-serde-1): Update to 1.0.152.
2023-01-12gnu: rust-regex-1: Update to 1.7.1.Efraim Flashner
* gnu/packages/crates-io.scm (rust-regex-1): Update to 1.7.1.
2023-01-12gnu: rust-critical-section-1: Update to 1.1.1.Efraim Flashner
* gnu/packages/crates-io.scm (rust-critical-section-1): Update to 1.1.1.
2023-01-12gnu: newsboat: Update to 2.30.1.Efraim Flashner
* gnu/packages/syndication.scm (newsboat): Update to 2.30.1.
2023-01-12gnu: rust-parking-lot-core-0.9: Update to 0.9.6.Efraim Flashner
* gnu/packages/crates-io.scm (rust-parking-lot-core-0.9): Update to 0.9.6. [cargo-inputs]: Replace rust-windows-sys-0.36 with 0.42.
2023-01-12gnu: rust-parking-lot-0.12: Fix build.Efraim Flashner
* gnu/packages/crates-io.scm (rust-parking-lot-0.12)[arguments]: Enable tests. [cargo-inputs]: Remove rust-instant-0.1. Replace rust-parking-lot-core-0.8 with 0.9. [cargo-development-inputs]: Add rust-bincode-1, rust-rand-0.8.
2023-01-12gnu: rust-once-cell-1: Update to 1.17.0.Efraim Flashner
* gnu/packages/crates-io.scm (rust-once-cell-1): Update to 1.17.0. [arguments]: Disable tests. [cargo-inputs]: Add rust-critical-section-1. [cargo-development-inputs]: Add rust-critical-section-1.
2023-01-12gnu: rust-lock-api-0.4: Update to 0.4.9.Efraim Flashner
* gnu/packages/crates-io.scm (rust-lock-api-0.4): Update to 0.4.9. [cargo-inputs]: Add rust-autocfg-1.
2023-01-12gnu: rust-crossbeam-utils-0.8: Update to 0.8.14.Efraim Flashner
* gnu/packages/crates-io.scm (rust-crossbeam-utils-0.8): Update to 0.8.14. [cargo-inputs]: Remove rust-once-cell-1. [cargo-development-inputs]: Add rust-rand-0.8, rust-rustversion-1.
2023-01-10Merge branch 'master' into stagingMarius Bakke
2023-01-10gnu: perftest: Update to 4.5-0.20.Marius Bakke
* gnu/packages/linux.scm (perftest): Update to 4.5-0.20. [source]: Switch to GIT-FETCH. [arguments]: Remove. [native-inputs]: Add AUTOCONF, AUTOMAKE, and LIBTOOL. [inputs]: Add PCIUTILS.
2023-01-10gnu: lib3mf: Update to 2.2.0.Marius Bakke
* gnu/packages/engineering.scm (lib3mf): Update to 2.2.0.
2023-01-10gnu: lib3mf: Remove bundled software.Marius Bakke
* gnu/packages/engineering.scm (lib3mf)[source](snippet): Delete bundled copies of libzip and zlib. Adjust header inclusions.
2023-01-10gnu: lib3mf: Remove input labels.Marius Bakke
* gnu/packages/engineering.scm (lib3mf)[inputs]: Remove labels.
2023-01-10gnu: lib3mf: Remove bundled ACT.Marius Bakke
* gnu/packages/engineering.scm (lib3mf)[source](modules, snippet): New fields. [arguments]: Add phase to provide act binary. [native-inputs]: Add AUTOMATIC-COMPONENT-TOOLKIT.
2023-01-10gnu: Add automatic-component-toolkit.Marius Bakke
* gnu/packages/code.scm (automatic-component-toolkit): New variable.
2023-01-09gnu: r-biocset: Update to 1.12.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.12.1.
2023-01-09gnu: r-biocviews: Update to 1.66.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.66.2.
2023-01-09gnu: r-variancepartition: Update to 1.28.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.28.1. [propagated-inputs]: Add r-remacor.
2023-01-09gnu: r-flowworkspace: Update to 4.10.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.10.1. [propagated-inputs]: Remove r-aws-s3, r-aws-signature, r-digest, r-lattice, r-latticeextra, r-rcpp, r-rcpparmadillo, and r-rcppparallel; add r-cpp11.
2023-01-09gnu: r-batchelor: Update to 1.14.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-batchelor): Update to 1.14.1.
2023-01-09gnu: r-msnbase: Update to 2.24.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-msnbase): Update to 2.24.2.
2023-01-09gnu: r-genomeinfodb: Update to 1.34.6.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.34.6.
2023-01-09gnu: r-bsgenome: Update to 1.66.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bsgenome): Update to 1.66.2.
2023-01-09gnu: r-biocparallel: Update to 1.32.5.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.32.5.
2023-01-09gnu: Add r-remacor.Ricardo Wurmus
* gnu/packages/cran.scm (r-remacor): New variable.
2023-01-09gnu: Add r-clustergeneration.Ricardo Wurmus
* gnu/packages/cran.scm (r-clustergeneration): New variable.
2023-01-09gnu: Update copyright header.Ricardo Wurmus
* gnu/packages/cran.scm: Update copyright header.
2023-01-09gnu: r-fpc: Update to 2.2-10.Ricardo Wurmus
* gnu/packages/statistics.scm (r-fpc): Update to 2.2-10.
2023-01-09gnu: r-statmod: Update to 1.5.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-statmod): Update to 1.5.0.
2023-01-09gnu: r-sendmailr: Update to 1.3-2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-sendmailr): Update to 1.3-2.
2023-01-09gnu: r-bien: Update to 1.2.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-bien): Update to 1.2.6. [propagated-inputs]: Remove r-rgdal, r-rgeos, and r-sp; add r-terra.
2023-01-09gnu: r-rtweet: Update to 1.1.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-rtweet): Update to 1.1.0. [propagated-inputs]: Add r-httr2.
2023-01-09gnu: r-mlr3learners: Update to 0.5.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-mlr3learners): Update to 0.5.6.
2023-01-09gnu: r-qtl: Update to 1.58.Ricardo Wurmus
* gnu/packages/cran.scm (r-qtl): Update to 1.58.
2023-01-09gnu: r-tidytext: Update to 0.4.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-tidytext): Update to 0.4.1.
2023-01-09gnu: r-forecast: Update to 8.20.Ricardo Wurmus
* gnu/packages/cran.scm (r-forecast): Update to 8.20.
2023-01-09gnu: r-qqconf: Update to 1.3.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-qqconf): Update to 1.3.1.
2023-01-09gnu: r-gkmsvm: Update to 0.82.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-gkmsvm): Update to 0.82.0.
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