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2018-08-29gnu: Add python-pyudev.Danny Milosavljevic
* gnu/packages/admin.scm (python-pyudev): New variable.
2018-08-29gnu: Add python-scanpy.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-scanpy): New variable.
2018-08-29gnu: Add python-anndata.Ricardo Wurmus
* gnu/packages/python.scm (python-anndata): New variable.
2018-08-29gnu: Add python-numba.Ricardo Wurmus
* gnu/packages/python.scm (python-numba): New variable.
2018-08-29gnu: Add python-llvmlite.Ricardo Wurmus
* gnu/packages/llvm.scm (python-llvmlite): New variable.
2018-08-29Revert "gnu: snappy: Optimise."Marius Bakke
This causes too many rebuilds for the master branch. This reverts commit f96ed06805db934ff735e80596f1373dc1c2b5a8.
2018-08-29gnu: Add ghc 8.4.3.Ricardo Wurmus
* gnu/packages/haskell.scm (ghc-8): Rename this... (ghc-8.0): ...to this. (ghc): Point at ghc-8.0. (ghc-8): New variable for GHC 8.4.3. Co-authored-by: Timothy Samplet <samplet@ngyro.com>
2018-08-29gnu: Add r-infotheo.Ricardo Wurmus
* gnu/packages/cran.scm (r-infotheo): New variable.
2018-08-28gnu: capstone: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/engineering.scm (capstone)[home-page]: Use HTTPS.
2018-08-28gnu: r-plotrix: Update to 3.7-3.Tobias Geerinckx-Rice
* gnu/packages/statistics.scm (r-plotrix): Update to 3.7-3.
2018-08-28gnu: python-apipkg: Update home page.Tobias Geerinckx-Rice
* gnu/packages/python.scm (python-apipkg)[home-page]: Update.
2018-08-28gnu: r-pracma: Update to 2.1.5.Tobias Geerinckx-Rice
* gnu/packages/maths.scm (r-pracma): Update to 2.1.5.
2018-08-28gnu: claws-mail: Update to 3.17.1.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (claws-mail): Update to 3.17.1.
2018-08-28gnu: libntlm: Update to 1.5.Tobias Geerinckx-Rice
* gnu/packages/gsasl.scm (libntlm): Update to 1.5. [source]: Use HTTPS.
2018-08-28gnu: snappy: Optimise.Tobias Geerinckx-Rice
* gnu/packages/compression.scm (snappy)[source]: Build with ‘-O2’. * gnu/package/patches/snappy-add-O2-flag-in-CmakeLists.txt.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2018-08-28gnu: Add urlscan.Efraim Flashner
* gnu/packages/mail.scm (urlscan): New variable.
2018-08-28gnu: Add ephoto.Efraim Flashner
* gnu/packages/enlightenment.scm (ephoto): New variable.
2018-08-28gnu: electron-cash: Update to 3.3.1.Vagrant Cascadian
* gnu/packages/finance.scm (electron-cash): Update to 3.3.1. Signed-off-by: Leo Famulari <leo@famulari.name>
2018-08-28gnu: dropbear: Fix CVE-2018-15599.Leo Famulari
* gnu/packages/patches/dropbear-CVE-2018-15599.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/ssh.scm (dropbear)[source]: Use it.
2018-08-28services: openssh: Add 'log-level' field.Ludovic Courtès
* gnu/services/ssh.scm (<openssh-configuration>)[log-level]: New field. (openssh-config-file): Honor it. * doc/guix.texi (Networking Services): Document it.
2018-08-28gnu: dico: Update to 2.6.Ludovic Courtès
* gnu/packages/dico.scm (dico): Update to 2.6. [inputs]: Switch to GUILE-2.2.
2018-08-28gnu: Add SpaceFM.Ison111
* gnu/packages/lxde.scm (spacefm): New variable. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2018-08-28gnu: Add emacs-build-farm.Alex Kost
* gnu/packages/emacs.scm (emacs-build-farm): New variable.
2018-08-28gnu: openmw: Update to 0.44.0.Alex Kost
* gnu/packages/game-development.scm (openmw): Update to 0.44.0.
2018-08-28services: tor: Make it easier to use UNIX sockets.Chris Marusich
* doc/guix.texi (Networking Services): Document it, and mention that tor-service is deprecated. * gnu/services/networking.scm (<tor-configuration>) <socks-socket-type>: New field. (tor-configuration->torrc): When socks-socket-type is 'unix, set SocksPort to UNIX domain socket /var/run/tor/socks-sock and set UnixSocksGroupWritable to 1. * gnu/tests/networking.scm (%tor-os/unix-socks-socket): Instead of using a custom config file, just set socks-socket-type to 'unix.
2018-08-28tests: tor: Add more test cases.Chris Marusich
* gnu/tests/networking.scm (%tor-os/unix-socks-socket): New variable. (run-tor-test) <os/unix-socks-socket, marionette/unix-socks-socket> <socket-directory>: New variables. <"tor is alive">: Move common code from this test case... <tor-is-alive?>: ...into this new procedure. <"tor is listening", "tor is alive, even when using a SOCKS socket"> <"tor is listening, even when using a SOCKS socket">: New test cases.
2018-08-28marionette: Add wait-for-unix-socket.Chris Marusich
* gnu/build/marionette.scm (wait-for-unix-socket): New variable.
2018-08-28marionette: Add support for QEMU's "quit" command.Chris Marusich
* gnu/build/marionette.scm (marionette-control): Don't wait for the monitor prompt when the command was "quit".
2018-08-28services: tor: Rename activation procedure.Chris Marusich
* gnu/services/networking.scm: Rename the procedure tor-hidden-service-activation to tor-activation.
2018-08-28services: tor: Add a system test.Chris Marusich
* gnu/services/networking.scm (tor-configuration->torrc): Set PidFile to /var/run/tor/tor.pid in the base torrc configuration. (tor-shepherd-service) <start>: Call make-forkexec-constructor/container with a new #:pid-file argument to tell Shepherd where to find the PID file. Add a a new <file-system-mapping> to its existing #:mappings argument to share /var/run/tor with the the container. (tor-hidden-services-activation): Update docstring. Create /var/run/tor and set its permissions so only the tor user can access it. * gnu/tests/networking.scm (%test-tor, %tor-os): New variables. (run-tor-test): New procedure.
2018-08-28gnu: GRUB: Check for errors from efibootmgr.Marius Bakke
* gnu/packages/patches/grub-check-error-efibootmgr.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/bootloaders.scm (grub)[source](patches): New field.
2018-08-28gnu: seabios: Update source URI.Marius Bakke
* gnu/packages/firmware.scm (seabios)[source](uri): Download from seabios.org.
2018-08-28gnu: slang: Update to 2.3.2.Marius Bakke
* gnu/packages/slang.scm (slang): Update to 2.3.2.
2018-08-28gnu: emacs-async: Download using git.Marius Bakke
The MELPA tarball hash changed. Prevent this problem in the future by downloading a git checkout. * gnu/packages/emacs.scm (emacs-async)[home-page]: Update to actual. [source]: Use GIT-FETCH.
2018-08-27gnu: feh: Enable EXIF support.Leo Famulari
* gnu/packages/image-viewers.scm (feh)[arguments]: Enable EXIF support. (inputs): Add libexif.
2018-08-27gnu: libexif: Update home-page URL.Leo Famulari
* gnu/packages/photo.scm (libexif)[home-page]: Update URL.
2018-08-27gnu: python-pygit2: Update to 0.26.4.Leo Famulari
* gnu/packages/python.scm (python-pygit2, python2-pygit2): Update to 0.26.4. [source]: Remove 'python-pygit2-disable-network-tests.patch'. * gnu/packages/patches/python-pygit2-disable-network-tests.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2018-08-27gnu: cuirass: Update to 8d40c49.Clément Lassieur
* gnu/packages/ci.scm (cuirass): Update to 8d40c49.
2018-08-27Update email for Pierre Neidhardt.Pierre Neidhardt
* .mailmap: Add name and email for Pierre Neidhardt. * gnu/packages/c.scm, gnu/packages/code.scm, gnu/packages/compression.scm, gnu/packages/disk.scm, gnu/packages/emacs.scm, gnu/packages/freedesktop.scm, gnu/packages/golang.scm, gnu/packages/image.scm, gnu/packages/music.scm, gnu/packages/networking.scm, gnu/packages/password-utils.scm, gnu/packages/perl-check.scm, gnu/packages/perl.scm, gnu/packages/textutils.scm, gnu/packages/video.scm, gnu/packages/xdisorg.scm: Update email for Pierre Neidhardt.
2018-08-27gnu: weston: Update to 5.0.0.Rutger Helling
* gnu/packages/freedesktop.scm (weston): Update to 5.0.0.
2018-08-27gnu: Add Lepton-EDA.Ludovic Courtès
* gnu/packages/engineering.scm (lepton-eda): New variable.
2018-08-27gnu: Add guile-aa-tree.Ludovic Courtès
* gnu/packages/guile.scm (guile-aa-tree): New variable.
2018-08-26gnu: emacs-racket-mode: Update to commit add0190.Christopher Lemmer Webber
* gnu/packages/emacs.scm (emacs-racket-mode): Update to commit add0190.
2018-08-26gnu: ghc-scientific: Update to 0.3.6.2.Arun Isaac
* gnu/packages/haskell.scm (ghc-scientific): Update to 0.3.6.2. [inputs]: Move ghc-tasty ... [native-inputs]: ... to here.
2018-08-26gnu: ghc-integer-logarithms: Update to 1.0.2.1.Arun Isaac
* gnu/packages/haskell.scm (ghc-integer-logarithms): Update to 1.0.2.1. [inputs]: Move ghc-quickcheck, ghc-smallcheck, ghc-tasty, ghc-tasty-hunit, ghc-tasty-quickcheck, ghc-tasty-smallcheck ... [native-inputs]: ... to here. [home-page]: Update URI.
2018-08-26gnu: ghc-smallcheck: Update to 1.1.5.Arun Isaac
* gnu/packages/haskell.scm (ghc-smallcheck): Update to 1.1.5.
2018-08-26gnu: ghc-optparse-applicative: Update to 0.14.2.0.Arun Isaac
* gnu/packages/haskell.scm (ghc-optparse-applicative): Update to 0.14.2.0. [arguments]: Enable tests.
2018-08-26gnu: linux-libre: Update to 4.18.5.Mark H Weaver
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.18.5. (%linux-libre-hash): Update hash.
2018-08-26gnu: linux-libre@4.14: Update to 4.14.67.Mark H Weaver
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.67. (%linux-libre-4.14-hash): Update hash.
2018-08-26gnu: linux-libre@4.9: Update to 4.9.124.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.124.
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