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2020-03-19gnu: r-accept: Update to 0.7.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-accept): Update to 0.7.1.
2020-03-19gnu: r-uwot: Update to 0.1.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-uwot): Update to 0.1.8. [propagated-inputs]: Remove r-rcppparallel.
2020-03-19gnu: r-ggraph: Update to 2.0.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggraph): Update to 2.0.2. [native-inputs]: Add r-knitr.
2020-03-19gnu: r-units: Update to 0.6-6.Ricardo Wurmus
* gnu/packages/cran.scm (r-units): Update to 0.6-6. [native-inputs]: Add r-knitr.
2020-03-19gnu: r-nonnest2: Update to 0.5-3.Ricardo Wurmus
* gnu/packages/cran.scm (r-nonnest2): Update to 0.5-3. [native-inputs]: Add r-knitr.
2020-03-19gnu: r-waveslim: Update to 1.8.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-waveslim): Update to 1.8.2.
2020-03-19gnu: r-ggeffects: Update to 0.14.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggeffects): Update to 0.14.2. [native-inputs]: Add r-knitr.
2020-03-19gnu: r-glmmtmb: Update to 1.0.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-glmmtmb): Update to 1.0.1.
2020-03-19gnu: r-pwr: Update to 1.3-0.Ricardo Wurmus
* gnu/packages/cran.scm (r-pwr): Update to 1.3-0.
2020-03-19gnu: r-officer: Update to 0.3.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-officer): Update to 0.3.8. [propagated-inputs]: Remove r-digest. [native-inputs]: Add r-knitr.
2020-03-19gnu: r-recipes: Update to 0.1.10.Ricardo Wurmus
* gnu/packages/cran.scm (r-recipes): Update to 0.1.10. [native-inputs]: Add r-knitr.
2020-03-19gnu: r-rmysql: Update to 0.10.20.Ricardo Wurmus
* gnu/packages/cran.scm (r-rmysql): Update to 0.10.20.
2020-03-19gnu: r-ffbase: Update to 0.12.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-ffbase): Update to 0.12.8.
2020-03-19gnu: r-rcpp: Update to 1.0.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcpp): Update to 1.0.4. [native-inputs]: Remove r-knitr.
2020-03-19gnu: r-glue: Update to 1.3.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-glue): Update to 1.3.2.
2020-03-19gnu: r-crosstalk: Update to 1.1.0.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-crosstalk): Update to 1.1.0.1. [propagated-inputs]: Remove r-ggplot2 and r-shiny.
2020-03-19gnu: r-biocpkgtools: Update to 1.4.6.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.4.6. [propagated-inputs]: Add r-biocfilecache, r-rappdirs, r-rlang, and r-tidyselect. [native-inputs]: Add r-knitr.
2020-03-19gnu: r-biosigner: Update to 1.14.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biosigner): Update to 1.14.2. [native-inputs]: Remove r-rmarkdown, pandoc, and pandoc-citeproc.
2020-03-19gnu: ungoogled-chromium: Update to 80.0.3987.149-0.516e2d9 [security fixes].Marius Bakke
This releases fixes CVE-2020-6422, CVE-2020-6424, CVE-2020-6425, CVE-2020-6426, CVE-2020-6427, CVE-2020-6428, CVE-2020-6429, CVE-2019-20503, and CVE-2020-6449. * gnu/packages/chromium.scm (%chromium-version): Set to 80.0.3987.149. (%ungoogled-revision): Set to 516e2d990a50a4bbeb8c583e56333c2935e2af95. (%chromium-origin, %ungoogled-origin): Update hashes.
2020-03-19gnu: python2-cython: Exclude parallel tests on i686 systems.Marius Bakke
* gnu/packages/python-xyz.scm (python2-cython)[arguments]: When building on i686-linux, override the 'check' phase.
2020-03-19gnu: git: Enable parallel tests.Marius Bakke
* gnu/packages/version-control.scm (git)[arguments]: Remove #:parallel-testS?.
2020-03-19gnu: varnish: Update to 6.4.0.Marius Bakke
* gnu/packages/web.scm (varnish): Update to 6.4.0.
2020-03-19gnu: RocksDB: Update to 6.7.3.Marius Bakke
* gnu/packages/databases.scm (rocksdb): Update to 6.7.3.
2020-03-19gnu: wpebackend-fdo: Update to 1.6.0.Marius Bakke
* gnu/packages/webkit.scm (wpebackend-fdo): Update to 1.6.0.
2020-03-19gnu: libwpe: Update to 1.6.0.Marius Bakke
* gnu/packages/webkit.scm (libwpe): Update to 1.6.0.
2020-03-19gnu: dav1d: Update to 0.6.0.Marius Bakke
* gnu/packages/video.scm (dav1d): Update to 0.6.0.
2020-03-19gnu: libsoup: Update to 2.70.0.Marius Bakke
* gnu/packages/gnome.scm (libsoup): Update to 2.70.0.
2020-03-19gnu: libsecret: Update to 0.20.2.Marius Bakke
* gnu/packages/gnome.scm (libsecret): Update to 0.20.2.
2020-03-19gnu: git: Update to 2.25.2.Marius Bakke
* gnu/packages/version-control.scm (git): Update to 2.25.2.
2020-03-19gnu: OpenSSL: Update replacement to 1.1.1e [fixes CVE-2019-1551].Marius Bakke
* gnu/packages/tls.scm (openssl-1.1.1d): Rename to ... (openssl-1.1.1e): ... this. Update to 1.1.1e. (openssl)[replacement]: Adjust accordingly.
2020-03-19gnu: sbcl-cl-webkit: Update to 20200319.Pierre Neidhardt
* gnu/packages/lisp-xyz.scm (sbcl-cl-webkit): Update to 20200319.
2020-03-19gnu: glances: Deprecate python- prefix.Tobias Geerinckx-Rice
* gnu/package/python-xyz.scm (glances): New public variable renamed from…… (python-glances): …this now-deprecated one.
2020-03-19gnu: Remove python2-glances variant.Tobias Geerinckx-Rice
* gnu/packages/python-xyz.scm (python2-glances): Remove variable.
2020-03-19gnu: python-glances: Update to 3.1.4.Tobias Geerinckx-Rice
* gnu/packages/python-xyz.scm (python-glances): Update to 3.1.4.
2020-03-19gnu: aircrack-ng: Update to 1.6.Tobias Geerinckx-Rice
* gnu/packages/networking.scm (aircrack-ng): Update to 1.6.
2020-03-19gnu: neomutt: Update to 20200313.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (neomutt): Update to 20200313.
2020-03-19gnu: Use HTTPS for supported psyc.eu subdomains.Tobias Geerinckx-Rice
* gnu/packages/messaging.scm (libpsyc)[home-page]: Use HTTPS. (perl-net-psyc)[source, description, home-page]: Likewise.
2020-03-19gnu: camlp5: Update home page.Tobias Geerinckx-Rice
* gnu/packages/ocaml.scm (camlp5)[home-page]: Update.
2020-03-19gnu: jrnl: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/jrnl.scm (jrnl)[home-page]: Use HTTPS.
2020-03-19gnu: libmygpo-qt: Update home page.Tobias Geerinckx-Rice
* gnu/packages/gpodder.scm (libmygpo-qt)[home-page]: Update.
2020-03-19gnu: camlzip: Update home page.Tobias Geerinckx-Rice
* gnu/packages/ocaml.scm (camlzip)[home-page]: Update.
2020-03-19gnu: lablgtk: Update to 2.18.10.Tobias Geerinckx-Rice
* gnu/packages/ocaml.scm (lablgtk): Update to 2.18.10.
2020-03-19gnu: bind: Update to 9.16.1.Tobias Geerinckx-Rice
* gnu/packages/dns.scm (isc-bind): Update to 9.16.1.
2020-03-19gnu: inxi-minimal: Update to 3.0.38-1.Tobias Geerinckx-Rice
* gnu/packages/admin.scm (inxi-minimal): Update to 3.0.38-1.
2020-03-19gnu: chafa: Update to 1.2.2.Tobias Geerinckx-Rice
* gnu/packages/image-viewers.scm (chafa): Update to 1.2.2.
2020-03-19gnu: workrave: Update to 1.10.37.Tobias Geerinckx-Rice
* gnu/packages/gnome.scm (workrave): Update to 1.10.37. [arguments]: Disable #:tests?.
2020-03-19gnu: dovecot: Use libsodium.Tobias Geerinckx-Rice
This adds support for ARGON2I and ARGON2ID password hashing in exchange for a <1% increase in closure size. * gnu/packages/mail.scm (dovecot)[inputs]: Add libsodium. (dovecot-libsodium-plugin)[description]: Note its use.
2020-03-19gnu: dovecot: Use SQLite.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (dovecot)[arguments]: Add "--with-sqlite" to #:configure-flags.
2020-03-19gnu: extempore: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/music.scm (extempore)[home-page]: Use HTTPS.
2020-03-19gnu: r-rhpcblasctl: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-rhpcblasctl)[home-page]: Use HTTPS.