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2020-06-11gnu: r-glue: Update to 1.4.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-glue): Update to 1.4.1.
2020-06-11gnu: r-ape: Update to 5.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-ape): Update to 5.4.
2020-06-11gnu: r-haven: Update to 2.3.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-haven): Update to 2.3.1. [native-inputs]: Add r-knitr. [propagated-inputs]: Add r-vctrs.
2020-06-11gnu: r-d3r: Update to 0.9.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-d3r): Update to 0.9.0. [propagated-inputs]: Add r-rlang.
2020-06-11gnu: r-servr: Update to 0.17.Ricardo Wurmus
* gnu/packages/cran.scm (r-servr): Update to 0.17.
2020-06-11gnu: r-httpuv: Update to 1.5.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-httpuv): Update to 1.5.4.
2020-06-11gnu: r-modelr: Update to 0.1.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-modelr): Update to 0.1.8. [propagated-inputs]: Remove r-dplyr; add r-vctrs.
2020-06-11gnu: r-ellipsis: Update to 0.3.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-ellipsis): Update to 0.3.1.
2020-06-11gnu: r-ggpmisc: Update to 0.3.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggpmisc): Update to 0.3.5. [propagated-inputs]: Add r-magrittr, r-rlang, r-scales, and r-stringr. [native-inputs]: Add r-knitr.
2020-06-11gnu: r-lubridate: Update to 1.7.9.Ricardo Wurmus
* gnu/packages/statistics.scm (r-lubridate): Update to 1.7.9.
2020-06-11gnu: r-sn: Update to 1.6-2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-sn): Update to 1.6-2.
2020-06-11gnu: r-mnormt: Update to 2.0.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-mnormt): Update to 2.0.0. [propagated-inputs]: Add r-tmvnsim.
2020-06-11gnu: Add r-tmvnsim.Ricardo Wurmus
* gnu/packages/statistics.scm (r-tmvnsim): New variable.
2020-06-11gnu: r-car: Update to 3.0-8.Ricardo Wurmus
* gnu/packages/statistics.scm (r-car): Update to 3.0-8.
2020-06-11gnu: r-cardata: Update to 3.0-4.Ricardo Wurmus
* gnu/packages/statistics.scm (r-cardata): Update to 3.0-4.
2020-06-11gnu: r-tidyr: Update to 1.1.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-tidyr): Update to 1.1.0.
2020-06-11gnu: r-mvtnorm: Update to 1.1-1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.1-1.
2020-06-11gnu: r-glmnet: Update to 4.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-glmnet): Update to 4.0. [native-inputs]: Add r-knitr.
2020-06-11gnu: r-rmarkdown: Update to 2.2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.2. [native-inputs]: Add r-knitr.
2020-06-11gnu: r-rcpparmadillo: Update to 0.9.900.1.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.900.1.0.
2020-06-11gnu: r-backports: Update to 1.1.7.Ricardo Wurmus
* gnu/packages/statistics.scm (r-backports): Update to 1.1.7.
2020-06-11gnu: r-dbplyr: Update to 1.4.4.Ricardo Wurmus
* gnu/packages/statistics.scm (r-dbplyr): Update to 1.4.4. [propagated-inputs]: Add r-blob and r-magrittr.
2020-06-11gnu: r-dplyr: Update to 1.0.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-dplyr): Update to 1.0.0. [propagated-inputs]: Remove r-assertthat, r-bh, r-pkgconfig, r-plogr, and r-rcpp; add r-generics, r-lifecycle, and r-vctrs.
2020-06-11gnu: r-ggplot2: Update to 3.3.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-ggplot2): Update to 3.3.1. [native-inputs]: Add r-knitr.
2020-06-11gnu: r-nlme: Update to 3.1-148.Ricardo Wurmus
* gnu/packages/statistics.scm (r-nlme): Update to 3.1-148.
2020-06-11gnu: r-foreign: Update to 0.8-80.Ricardo Wurmus
* gnu/packages/statistics.scm (r-foreign): Update to 0.8-80.
2020-06-11gnu: php: Update to 7.4.7.Julien Lepiller
* gnu/packages/php.scm (php): Update to 7.4.7.
2020-06-11gnu: sameboy: Update to 0.13.2.Jakub Kądziołka
* gnu/packages/emulators.scm (sameboy): Update to 0.13.2. [arguments]: Specify NATIVE_CC to avoid requiring the `cc' program.
2020-06-11gnu: java-jakarta-oro: Use a mirror URL.Efraim Flashner
* gnu/packages/java.scm (java-jakarta-oro)[source]: Download using an apache mirror:// URL.
2020-06-11gnu: java-commons-httpclient: Use a mirror URL.Efraim Flashner
* gnu/packages/java.scm (java-commons-httpclient)[source]: Use an apache mirror:// URL.
2020-06-11gnu: ant-bootstrap: Use a mirror URL.Efraim Flashner
* gnu/packages/java.scm (ant-bootstrap)[source]: Use an apache mirror:// URL.
2020-06-11gnu: maven-artifact: Use a mirror URL.Efraim Flashner
* gnu/packages/maven.scm (maven-artifact)[source]: Use an apache mirror:// URL.
2020-06-11gnu: maven-wagon-provider-api: Use a mirror URL.Efraim Flashner
* gnu/packages/maven.scm (maven-wagon-provider-api)[source]: Use an apache mirror:// URL.
2020-06-11gnu: maven-plugin-annotations: Use a mirror URL.Efraim Flashner
* gnu/packages/maven.scm (maven-plugin-annotations)[source]: Use an apache mirror:// URL.
2020-06-11gnu: maven-shared-utils: Use a mirror URL.Efraim Flashner
* gnu/packages/maven.scm (maven-shared-utils)[source]: Use an apache mirror:// URL.
2020-06-11gnu: serf: Use a mirror URL.Efraim Flashner
* gnu/packages/web.scm (serf)[source]: Use an apache mirror:// URL.
2020-06-11gnu: subversion: Use a mirror URL.Efraim Flashner
* gnu/packages/version-control.scm (subversion)[source]: Use an apache mirror:// URL.
2020-06-11gnu: lyx: Use qt-build-system.Efraim Flashner
* gnu/packages/tex.scm (lyx)[build-system]: Switch to qt-build-system. [arguments]: Remove imported modules. Remove custom 'wrap-qt phase.
2020-06-11gnu: lyx: Don't install to custom directory.Efraim Flashner
* gnu/packages/tex.scm (lyx)[arguments]: Adjust configure-flags to not add the version to the binary's suffix. Remove custom 'patch-desktop-file, 'setenv-check and 'install-symlink phases.
2020-06-11gnu: lyx: Update to 2.3.5.1.Efraim Flashner
* gnu/packages/tex.scm (lyx): Update to 2.3.5.1. [arguments]: Remove 'fix-compilation-with-boost-1.69 phase. In 'patch-python phase patch more files, substitute with python3. Split 'setenv-check and create empty file after 'unpack.
2020-06-11gnu: lyx: Wrap binary.Efraim Flashner
Fixes <https://bugs.gnu.org/37147>. * gnu/packages/tex.scm (lyx)[arguments]: Import qt-utils. Add phase to wrap the lyx2.3 binary.
2020-06-10gnu: fet: Update to 5.45.0.Nicolas Goaziou
* gnu/packages/education.scm (fet): Update to 5.45.0.
2020-06-10gnu: scintilla: Update to 4.4.3.Nicolas Goaziou
* gnu/packages/text-editors.scm (scintilla): Update to 4.4.3.
2020-06-10gnu: thinkfan: Update to 1.2.Nicolas Goaziou
* gnu/packages/linux.scm (thinkfan): Update to 1.2. [home-page]: Switch to an up-to-date home page.
2020-06-10gnu: progress: Update to 0.15.Tobias Geerinckx-Rice
* gnu/packages/admin.scm (progress): Update to 0.15.
2020-06-10gnu: man-pages: Update to 5.07.Tobias Geerinckx-Rice
* gnu/packages/man.scm (man-pages): Update to 5.07.
2020-06-10gnu: ipopt: Fix source URI.Nicolas Goaziou
* gnu/packages/maths.scm (ipopt)[source]: Fix URI.
2020-06-10gnu: grfcodec: Fix source URL.Nicolas Goaziou
* gnu/packages/game-development.scm (grfcodec)[source]: Use HTTPS for URL. Re-indent package.
2020-06-10gnu: cuirass: Update to 0.0.1-2280ae18.Mathieu Othacehe
* gnu/packages/ci.scm (cuirass): Update to 0.0.1-2280ae18.
2020-06-10gnu: ipopt: Use HTTPS home page URI.Nicolas Goaziou
* gnu/packages/maths.scm (ipopt)[home-page]: Use HTTPS URI.
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