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2019-03-04gnu: python-fonttools: Update to 3.38.0.Marius Bakke
* gnu/packages/python-xyz.scm (python-fonttools): Update to 3.38.0.
2019-03-04gnu: python-pytz: Update to 2018.9.Marius Bakke
* gnu/packages/time.scm (python-pytz): Update to 2018.9.
2019-03-04gnu: python-attrs: Update to 19.1.0.Marius Bakke
* gnu/packages/python-xyz.scm (python-attrs): Update to 19.1.0.
2019-03-04gnu: python-attrs-bootstrap: Update to 18.2.0.Marius Bakke
* gnu/packages/python-xyz.scm (python-attrs-bootstrap)[version, source]: Remove.
2019-03-04gnu: python-pympler: Update to 0.6.Marius Bakke
* gnu/packages/python-xyz.scm (python-pympler): Update to 0.6.
2019-03-04gnu: python-zope-interface: Update to 4.6.0.Marius Bakke
* gnu/packages/python-web.scm (python-zope-interface): Update to 4.6.0.
2019-03-04gnu: python-zope-event: Update to 4.4.Marius Bakke
* gnu/packages/python-web.scm (python-zope-event): Update to 4.4.
2019-03-04gnu: python-flake8: Update to 3.7.7.Marius Bakke
* gnu/packages/python-xyz.scm (python-flake8): Update to 3.7.7. [propagated-inputs]: Add PYTHON-ENTRYPOINTS. (python2-flake8)[propagated-inputs]: Add PYTHON2-TYPING.
2019-03-04gnu: python-six: Update to 1.12.0.Marius Bakke
* gnu/packages/python-xyz.scm (python-six): Update to 1.12.0.
2019-03-04gnu: python-pytest: Update to 4.3.0.Marius Bakke
* gnu/packages/patches/python-pytest-pluggy-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/check.scm (python-pytest): Update to 4.3.0. [source](patches): New field. [arguments]: Skip five new tests. Disable tests by passing them as arguments.
2019-03-04gnu: python-hypothesis: Update to 4.7.19.Marius Bakke
* gnu/packages/check.scm (python-hypothesis): Update to 4.7.19.
2019-03-04gnu: python-pytest-runner: Update to 4.4.Marius Bakke
* gnu/packages/check.scm (python-pytest-runner): Update to 4.4.
2019-03-04gnu: python-pluggy: Update to 0.9.0.Marius Bakke
* gnu/packages/python-xyz.scm (python-pluggy): Update to 0.9.0.
2019-03-04gnu: python-pyflakes: Update to 2.1.1.Marius Bakke
* gnu/packages/python-xyz.scm (python-pyflakes): Update to 2.1.1.
2019-03-04gnu: python-py: Update to 1.8.0.Marius Bakke
* gnu/packages/python-xyz.scm (python-py): Update to 1.8.0.
2019-03-04gnu: Python@2: Update to 2.7.16.Marius Bakke
* gnu/packages/patches/python2-CVE-2018-1000802.patch, gnu/packages/patches/python2-CVE-2018-14647.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/python.scm (python-2.7): Update to 2.7.16. [source](patches): Remove obsolete.
2019-03-02gnu: bash: Update to patch level 2.Efraim Flashner
* gnu/packages/bash.scm (%patch-series-5.0): Add patches 1 and 2. [source]: Apply patches. [version]: Update with patch numbers.
2019-03-01gnu: efibootmgr: Fix build failure with GCC7.Marius Bakke
* gnu/packages/linux.scm (efibootmgr)[arguments]: Set C_INCLUDE_PATH.
2019-03-01gnu: OpenSSL@1.0: Update to 1.0.2r.Marius Bakke
* gnu/packages/tls.scm (openssl): Update to 1.0.2r. [replacement]: Remove. (openssl/fixed): Remove variable.
2019-03-01Merge branch 'staging' into core-updatesMarius Bakke
2019-03-01Merge branch 'master' into stagingMarius Bakke
2019-03-01gnu: libssh: Update to 0.8.7.Marius Bakke
* gnu/packages/ssh.scm (libssh): Update to 0.8.7.
2019-03-01gnu: re2: Update to 2019-03-01.Marius Bakke
* gnu/packages/regex.scm (re2): Update to 2019-03-01.
2019-03-01gnu: libqmi: Update to 1.22.2.Marius Bakke
* gnu/packages/freedesktop.scm (libqmi): Update to 1.22.2.
2019-03-01gnu: libqmi: Don't use NAME in source URI.Marius Bakke
* gnu/packages/freedesktop.scm (libqmi)[source](uri): Hard-code NAME.
2019-03-01gnu: python-cryptography: Update to 2.6.1.Marius Bakke
* gnu/packages/python-crypto.scm (python-cryptography-vectors, python-cryptography): Update to 2.6.1.
2019-03-01gnu: OpenSSL: Update to 1.1.1b.Marius Bakke
* gnu/packages/tls.scm (openssl-next): Update to 1.1.1b.
2019-03-01gnu: efibootmgr: Remove obsolete configure flag.Marius Bakke
* gnu/packages/linux.scm (efibootmgr)[arguments]: Don't override CFLAGS.
2019-03-01gnu: efibootmgr: Don't use NAME in source URI.Marius Bakke
* gnu/packages/linux.scm (efibootmgr)[source](uri): Hard-code NAME.
2019-03-01gnu: attr: Update to 2.4.48.Marius Bakke
* gnu/packages/attr.scm (attr): Update to 2.4.48. [source](uri): Adjust for renamed tarball. [arguments]: Remove obsolete phases. [license]: Remove GPL2+ (see upstream commit 0fb61a4d20).
2019-03-01gnu: acl: Update to 2.2.53.Marius Bakke
* gnu/packages/patches/acl-hurd-path-max.patch, gnu/packages/patches/acl-fix-perl-regex.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/acl.scm (acl): Update to 2.2.53. [source](uri): Adjust for renamed tarball. [arguments]: Remove #:test-target. Adjust disabled tests. Don't override install phase.
2019-03-01gnu: libcap: Update to 2.26.Marius Bakke
* gnu/packages/linux.scm (libcap): Update to 2.26.
2019-03-01gnu: python-requests: Propagate required inputs.Marius Bakke
This is a follow-up to commit b5c2e7205177742f33b308a1590f279ce132d5b4. * gnu/packages/python-web.scm (python-requests)[propagated-inputs]: Add PYTHON-CERTIFI, PYTHON-CHARDET, PYTHON-IDNA, and PYTHON-URLLIB3. (python-urllib3)[native-inputs]: Remove (due to dependency cycle).
2019-03-01gnu: python-cffi: Build HTML documentation in separate derivation.Marius Bakke
This is necessary to solve a dependency cycle between Sphinx and Requests. * gnu/packages/libffi.scm (python-cffi)[outputs]: Remove. [native-inputs]: Remove PYTHON-SPHINX. [arguments]: Remove 'install-doc' phase. * gnu/packages/libffi.scm (python-cffi-documentation): New public variable.
2019-03-01gnu: pciutils: Update to 3.6.2.Marius Bakke
* gnu/packages/pciutils.scm (pciutils): Update to 3.6.2.
2019-03-01gnu: kmod: Update to 26.Marius Bakke
* gnu/packages/linux.scm (kmod): Update to 26.
2019-03-01gnu: elfutils: Update to 0.176.Marius Bakke
* gnu/packages/elf.scm (elfutils): Update to 0.176.
2019-03-01gnu: gdk-pixbuf: Update to 2.38.1.Marius Bakke
* gnu/packages/gtk.scm (gdk-pixbuf): Update to 2.38.1.
2019-03-01gnu: Add velvet.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (velvet): New variable.
2019-03-01gnu: discrover: Remove indirect TexLive dependencies.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (discrover)[native-inputs]: Remove texlive-generic-ifxetex, texlive-latex-oberdiek, texlive-latex-url, and texlive-latex-xcolor from texlive-union.
2019-03-01gnu: texlive-latex-pgf: Add missing input.Ricardo Wurmus
* gnu/packages/tex.scm (texlive-latex-pgf)[propagated-inputs]: Add texlive-latex-xcolor.
2019-03-01gnu: asymptote: Remove indirect TexLive dependency.Ricardo Wurmus
* gnu/packages/plotutils.scm (asymptote)[native-inputs]: Remove texlive-generic-ifxetex from texlive-union.
2019-03-01gnu: hypre: Remove indirect TexLive dependencies.Ricardo Wurmus
* gnu/packages/maths.scm (hypre)[native-inputs]: Remove texlive-latex-oberdiek, texlive-generic-ifxetex, and texlive-latex-url from texlive-union.
2019-03-01gnu: texlive-latex-oberdiek: Add ifxetex to inputs.Ricardo Wurmus
* gnu/packages/tex.scm (texlive-latex-oberdiek)[propagated-inputs]: Add texlive-generic-ifxetex.
2019-03-01gnu: texlive-latex-hyperref: Add missing inputs.Ricardo Wurmus
* gnu/packages/tex.scm (texlive-latex-hyperref)[propagated-inputs]: Add texlive-latex-oberdiek and texlive-latex-url.
2019-03-01gnu: rust: Factor out "cargo-utils" from "cargo-build-system".Ivan Petkov
* guix/build/cargo-utils.scm: New file. * Makefile.am (MODULES): Add it. * guix/build-system/cargo.scm (%cargo-utils-modules): New variable. (%cargo-build-system-modules): Use it. * guix/build/cargo-build-system.scm (file-sha256, generate-checksums): Move from here... * guix/build/cargo-utils.scm: ...to here. * gnu/packages/rust.scm (rust-1.19.0)[arguments]<#:imported-modules>: Use %cargo-utils-modules. <#:phases>[patch-cargo-checksums]: Use (guix build cargo-utils). * gnu/packages/gnuzilla.scm (icecat): [arguments]<#:imported-modules>: Use %cargo-utils-modules. <#phases>[patch-cargo-checksums]: import (guix build cargo-utils). Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-01gnu: openssl@1.1.1a: Don't inherit from openssl/fixed.Tobias Geerinckx-Rice
I was a bit hasty in a92c6b1a2b5b8b69f248c732db4a11ddf130f0f1. openssl-next replaces the source, and OpenSSL 1.1.1 is invulnerable. * gnu/packages/tls.scm (openssl-next)[inherit]: Inherit from openssl once more.
2019-03-01gnu: openssl: Fix CVE-2019-1559.Tobias Geerinckx-Rice
* gnu/packages/tls.scm (openssl)[replacement]: New field. (openssl/fixed): New variable. (openssl-next)[inherit]: Inherit from it instead. * gnu/packages/patches/openssl-CVE-2019-1559.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2019-02-28gnu: clementine: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/music.scm (clementine)[home-page]: Use HTTPS.
2019-02-28gnu: libunwind: Update to 1.3.1.Tobias Geerinckx-Rice
* gnu/packages/libunwind.scm (libunwind): Update to 1.3.1.
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