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2019-03-08gnu: r-mzr: Update to 2.16.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.16.2. [inputs]: Replace "boost" with "boost-for-mysql".
2019-03-08gnu: r-gviz: Update to 1.26.5.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.26.5.
2019-03-08gnu: r-ensembldb: Update to 2.6.7.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.6.7.
2019-03-08gnu: r-annotationhub: Update to 2.14.4.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.14.4.
2019-03-08gnu: r-rhtslib: Update to 1.14.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.14.1.
2019-03-08gnu: r-genomicfeatures: Update to 1.34.4.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.34.4.
2019-03-08gnu: r-rtracklayer: Update to 1.42.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.42.2.
2019-03-08gnu: r-rsamtools: Update to 1.34.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 1.34.1.
2019-03-08gnu: r-biocparallel: Update to 1.16.6.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.16.6.
2019-03-08gnu: r-variantannotation: Update to 1.28.11.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.28.11.
2019-03-08gnu: r-genomeinfodb: Update to 1.18.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.18.2.
2019-03-08gnu: r-dexseq: Update to 1.28.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.28.2.
2019-03-08gnu: man-pages: Update to 5.00.Tobias Geerinckx-Rice
* gnu/packages/man.scm (man-pages): Update to 5.00. [source]: Re-format.
2019-03-08gnu: dovecot: Update to 2.3.5.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (dovecot): Update to 2.3.5. [arguments]: Patch more tests in ‘patch-file-names’ phase, renamed from ‘patch-other-file-names’.
2019-03-08gnu: dovecot: Don't use NAME in source URI.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (dovecot)[source]: Hard-code NAME.
2019-03-08gnu: Add mruby.Ricardo Wurmus
* gnu/packages/ruby.scm (mruby): New variable.
2019-03-07gnu: r-ggmap: Update to 3.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggmap): Update to 3.0.0. [propagated-inputs]: Add r-bitops, r-dplyr, r-glue, r-httr, r-magrittr, r-purrr, r-stringr, r-tibble, and r-tidyr; remove r-geosphere, r-mapproj, r-proto, and r-reshape2.
2019-03-07gnu: r-readxl: Update to 1.3.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-readxl): Update to 1.3.0.
2019-03-07gnu: r-sys: Update to 3.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-sys): Update to 3.0.
2019-03-07gnu: r-servr: Update to 0.13.Ricardo Wurmus
* gnu/packages/cran.scm (r-servr): Update to 0.13.
2019-03-07gnu: r-flextable: Update to 0.5.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-flextable): Update to 0.5.1. [propagated-inputs]: Add r-data-table, r-magick, and r-rlang; remove r-r6 and r-stringr.
2019-03-07gnu: r-proxy: Update to 0.4-23.Ricardo Wurmus
* gnu/packages/cran.scm (r-proxy): Update to 0.4-23.
2019-03-07gnu: r-haven: Update to 2.1.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-haven): Update to 2.1.0.
2019-03-07gnu: r-emdbook: Update to 1.3.11.Ricardo Wurmus
* gnu/packages/cran.scm (r-emdbook): Update to 1.3.11.
2019-03-07gnu: r-rmysql: Update to 0.10.17.Ricardo Wurmus
* gnu/packages/cran.scm (r-rmysql): Update to 0.10.17. [native-inputs]: Remove pkg-config.
2019-03-07gnu: r-gower: Update to 0.2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-gower): Update to 0.2.0. [native-inputs]: Remove r-knitr.
2019-03-07gnu: r-ggsignif: Update to 0.5.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggsignif): Update to 0.5.0.
2019-03-07gnu: r-jomo: Update to 2.6-7.Ricardo Wurmus
* gnu/packages/cran.scm (r-jomo): Update to 2.6-7.
2019-03-07gnu: r-mice: Update to 3.4.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-mice): Update to 3.4.0.
2019-03-07gnu: r-xfun: Update to 0.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-xfun): Update to 0.5.
2019-03-07gnu: r-metap: Update to 1.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-metap): Update to 1.1.
2019-03-07gnu: r-ifultools: Update to 2.0-5.Ricardo Wurmus
* gnu/packages/cran.scm (r-ifultools): Update to 2.0-5.
2019-03-07gnu: r-radiant-data: Update to 0.9.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-radiant-data): Update to 0.9.9. [propagated-inputs]: Add r-stringi; remove r-summarytools.
2019-03-07gnu: r-later: Update to 0.8.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-later): Update to 0.8.0.
2019-03-07gnu: r-vim: Update to 4.8.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-vim): Update to 4.8.0. [propagated-inputs]: Add r-ranger.
2019-03-07gnu: r-fnn: Update to 1.1.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-fnn): Update to 1.1.3.
2019-03-07gnu: r-arules: Update to 1.6-3.Ricardo Wurmus
* gnu/packages/cran.scm (r-arules): Update to 1.6-3.
2019-03-07gnu: r-zip: Update to 2.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-zip): Update to 2.0.0.
2019-03-07gnu: r-maptools: Update to 0.9-5.Ricardo Wurmus
* gnu/packages/cran.scm (r-maptools): Update to 0.9-5.
2019-03-07gnu: r-reticulate: Update to 1.11.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-reticulate): Update to 1.11.1.
2019-03-07gnu: r-officer: Update to 0.3.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-officer): Update to 0.3.3. [propagated-inputs]: Add r-rlang.
2019-03-07gnu: r-prediction: Update to 0.3.6.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-prediction): Update to 0.3.6.2.
2019-03-07gnu: r-abjutils: Update to 0.2.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-abjutils): Update to 0.2.3. [propagated-inputs]: Add r-furrr, r-future, r-readr, and r-rlang; remove r-plyr.
2019-03-07gnu: r-slam: Update to 0.1-45.Ricardo Wurmus
* gnu/packages/cran.scm (r-slam): Update to 0.1-45.
2019-03-07gnu: r-hash: Update to 2.2.6.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-hash): Update to 2.2.6.1.
2019-03-07gnu: r-dvmisc: Update to 1.1.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-dvmisc): Update to 1.1.3. [propagated-inputs]: Add r-cubature, r-data-table, r-dplyr, r-ggplot2, r-mvtnorm, r-pracma, r-purrr, and r-survey.
2019-03-07gnu: r-summarytools: Update to 0.9.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-summarytools): Update to 0.9.2. [propagated-inputs]: Add r-checkmate, r-dplyr, r-magick, and r-tidyr.
2019-03-07gnu: r-multcomp: Update to 1.4-10.Ricardo Wurmus
* gnu/packages/cran.scm (r-multcomp): Update to 1.4-10.
2019-03-07gnu: r-emmeans: Update to 1.3.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-emmeans): Update to 1.3.3. [propagated-inputs]: Add r-numderiv.
2019-03-07gnu: r-afex: Update to 0.23-0.Ricardo Wurmus
* gnu/packages/cran.scm (r-afex): Update to 0.23-0.
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