Age | Commit message (Collapse) | Author |
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* gnu/packages/databases.scm (kyotocabinet): New variable.
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* gnu/packages/bioinformatics.scm (libbigwig): New variable.
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* gnu/packages/guile.scm (guile-json): Update to 0.5.0.
Signed-off-by: Andreas Enge <andreas@enge.fr>
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* gnu/packages/audio.scm (ardour): Update to 4.7.
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Fixes <http://bugs.gnu.org/22755>.
* gnu/packages/freedesktop.scm (xdg-utils): Propagate xprop and xset.
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* gnu/packages/patches/libssh-CVE-2014-0017.patch: Delete file.
* gnu/packages/patches/libssh-0.6.5-CVE-2016-0739.patch: New file.
* gnu-system.am (dist_patch_DATA): Adjust accordingly.
* gnu/packages/ssh.scm (libssh): Update to 0.7.3.
(libssh-0.5): Rename to...
(libssh-0.6): ... this. Update to 0.6.5.
[source]: Add patch for CVE-2016-0739.
(guile-ssh)[inputs]: Use libssh-0.6.
Modified-By: Mark H Weaver <mhw@netris.org>
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* gnu/packages/ssh.scm (libssh2): Update to 1.7.0.
(libssh2-1.4): New variable.
* gnu/packages/curl.scm (curl)[inputs]: Use libssh4-1.4.
Modified-By: Mark H Weaver <mhw@netris.org>
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* gnu/packages/gdb.scm (gdb): Update to 7.11.
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* gnu/packages/kde-frameworks.scm (kwindowsystem): Update to 5.19.0.
(extra-cmake-modules): Update to 5.19.0.
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* gnu/packages/bioinformatics.scm (r-topgo)[propagated-inputs]: Add
"r-graph".
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* gnu/packages/bioinformatics.scm (r-graph): New variable.
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* gnu/packages/bioinformatics.scm (r-org-mm-eg-db): New variable.
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* gnu/packages/bioinformatics.scm (r-org-dm-eg-db): New variable.
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* gnu/packages/bioinformatics.scm (r-org-ce-eg-db): New variable.
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* gnu/packages/bioinformatics.scm (r-org-hs-eg-db): New variable.
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Fixes <http://bugs.gnu.org/22740>.
Reported by Andreas Enge <andreas@enge.fr>.
* gnu/packages.scm (waiting, ftp-open*, check-package-freshness): Remove.
* guix/scripts/package.scm (options->installable): Adjust accordingly.
* emacs/guix-main.scm (package->manifest-entry*): Likewise.
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Reported by myglc2 <myglc2@gmail.com>.
* gnu/packages/lsh.scm (lsh)[inputs]: Add XAUTH.
[arguments]: Modify 'XAUTH_PROGRAM' macro in 'server_x11.c'.
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* gnu/packages/lsh.scm (lsh)[arguments]: Use 'modify-phases' instead of
'alist-cons-before'.
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* gnu/services/desktop.scm (polkit-etc-files): Add the polkit package
itself to the list of packages to scan for .policy files. This add
support for pkexec.
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* gnu/packages/video.scm (mplayer)[arguments]: Use 'modify-phases'.
[source]: Use https.
[home-page]: Use https.
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* gnu/packages/video.scm (mplayer)[inputs]: Add libass, libmpeg2,
libvdpau, libx264, opus.
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* gnu/packages/ssh.scm (dropbear): Update to 2015.71.
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* gnu/packages/guile.scm (guile-next): Use the "2.2" directory for the
load paths.
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* gnu/services/herd.scm (report-action-error): Add missing newlines in
messages.
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* gnu/packages/xfce.scm (xfce4-xkb-plugin): New variable.
(xfce)[propagated-inputs]: Add it.
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* gnu/packages/freedesktop.scm (telepathy-logger)[arguments]: Disable parallel
tests.
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* gnu/packages/ldc.scm (rdmd): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/freedesktop.scm (modem-manager)[source]: Use HTTPS URL.
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* gnu/packages/mpd.scm (mpd): Update t0 0.19.12.
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* gnu/packages/mpd.scm (ncmpcpp): Update to 0.7.3.
[inputs]: Add icu4c.
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* gnu/packages/mpd.scm (ncmpcpp)[arguments]: Use 'modify-phases'.
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Fixes <http://bugs.gnu.org/22633>.
* gnu/build/vm.scm (load-in-linux-vm): Only pass "-enable-kvm" flag to qemu
if "/dev/kvm" is present.
* gnu/system/vm.scm (common-kvm-options): Same as above.
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* gnu/packages/pkg-config.scm (%pkg-config)[source]: Add non-HTTPS URL.
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* gnu/packages/qt.scm (python2-pyqt-4): Delete variable. It depends on Qt 4,
which does not receive security updates any more.
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* gnu/packages/kde.scm (qjson): Move from here...
* gnu/packages/qt.scm (qjson): ...to here.
* gnu/packages/pumpio.scm: Drop inclusion of (gnu packages kde).
* gnu/packages/kde.scm: Delete file.
* gnu-system.am (GNU_SYSTEM_MODULES): Unregister it.
* gnu/packages/rdf.scm (soprano): Delete variable.
KDE 4 relies on Qt 4, which does not receive security updates any more.
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* gnu/packages/statistics.scm (python-patsy)[properties]: New field.
(python2-patsy): Use 'strip-python2-variant'.
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* gnu/packages/statistics.scm (python-patsy, python2-patsy): Update to 0.4.1.
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* gnu/packages/patches/qemu-CVE-2015-8619.patch,
gnu/packages/patches/qemu-CVE-2016-1981.patch,
gnu/packages/patches/qemu-CVE-2016-2197.patch,
gnu/packages/patches/qemu-usb-ehci-oob-read.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/qemu.scm (qemu)[source]: Add patches.
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* gnu/packages/gnome.scm (gnome-screenshot): New variable.
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* gnu/packages/fontutils.scm (libotf): Use mirror://savannah URL.
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* gnu/packages/adns.scm (c-ares): Update to 1.11.0.
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* gnu/packages/parallel.scm (parallel): Update to 20160122.
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* gnu/packages/tls.scm (acme)[arguments]: Add 'docs' phase.
[native-inputs]: Add python-sphinx, python-sphinxcontrib-programoutput,
python-sphinx-rtd-theme, python-setuptools, texinfo.
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* gnu/packages/tls.scm (letsencrypt)[arguments]: Add 'docs' phase.
[native-inputs]: Add python2-sphinx, python2-sphinx-rtd-theme,
python2-sphinx-repoze-autointerface,
python2-sphinxcontrib-programoutput, texinfo.
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* gnu/packages/python.scm (python-sphinx-repoze-autointerface,
python2-sphinx-repoze-autointerface): New variables.
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* gnu/packages/python.scm (python-sphinxcontrib-programoutput,
python2-sphinxcontrib-programoutput): New variables.
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Unzip was never used for this package.
* gnu/packages/python.scm (python-apipkg): Remove unzip dependency.
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* gnu/packages/python.scm (python-editor, python2-editor): New variables.
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* gnu/packages/python.scm (python-translitcodec, python2-translitcodec):
New variables.
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* gnu/packages/python.scm (python-celery, python2-celery): New variables.
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