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2018-06-22gnu: pigx-chipseq: Update to 0.0.17.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (pigx-chipseq): Update to 0.0.17. [arguments]: Remove "wrap-executable" phase.
2018-06-22gnu: git: Add "credential-netrc" output.Pierre Neidhardt
* gnu/packages/version-control.scm (git): Add "credential-netrc" output. Signed-off-by: Gábor Boskovits <boskovits@gmail.com>
2018-06-22gnu: gnome-dictionary: Update to 3.26.1.Ludovic Courtès
* gnu/packages/gnome.scm (gnome-dictionary): Update to 3.26.1. [build-system]: Switch to MESON-BUILD-SYSTEM. [arguments]; New field.
2018-06-22Do not record store file name in bioinformatics.scm.Ludovic Courtès
* gnu/packages/bioinformatics.scm (dropseq-tools): Replace full store file name with ellipses.
2018-06-22gnu: parallel: Remove 'bash' input.Clément Lassieur
Because it's implicit. * gnu/packages/parallel.scm (parallel)[inputs]: Remove 'bash'.
2018-06-22gnu: nyx: Show header stats.Tobias Geerinckx-Rice
This is a follow-up to commit 18ab54d4a2aaf932b14e69c30650c1d2c4db33c7 and fixes a regression introduced by Nyx 2.0.4 + Python 3. * gnu/packages/tor.scm (nyx)[source]: Add patch. * gnu/packages/patches/nyx-show-header-stats-with-python3.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2018-06-22gnu: parallel: Wrap program instead of substituting 'ps' and 'perl'.Clément Lassieur
* gnu/packages/parallel.scm (parallel)[arguments]: Replace 'ps' and 'perl' substitutions with a 'wrap-program' phase. Move the 'post-install-test' phase after it. [inputs]: Add bash.
2018-06-22gnu: nyx: Update to 2.0.4.Tobias Geerinckx-Rice
* gnu/packages/tor.scm (nyx): Update to 2.0.4. [source]: Use proper PYPI-URI release tarball. [native-inputs]: Remove (possibly outdated) test dependencies for now. [arguments]: Remove no-longer-supported #:configure-flags, adding new ‘install-man-page’ and ‘install-sample-configuration’ phases. Use setuptools. Disable tests.
2018-06-22gnu: perl-catalyst-runtime: Update to 5.90118.Tobias Geerinckx-Rice
* gnu/packages/web.scm (perl-catalyst-runtime): Update to 5.90118. [source]: Update URI. [native-inputs]: Remove perl-module-install. [inputs]: Remove perl-class-data-inheritable, perl-http-request-ascgi, perl-moosex-role-withoverloading, and perl-namespace-autoclean.
2018-06-22gnu: perl-catalystx-script-server-starman: Update to 0.03.Tobias Geerinckx-Rice
* gnu/packages/web.scm (perl-catalystx-script-server-starman): Update to 0.03.
2018-06-22gnu: nyx: Update home page.Tobias Geerinckx-Rice
* gnu/packages/tor.scm (nyx)[home-page]: Update. [description]: Remove last reference to old ‘arm’ project name.
2018-06-22gnu: nyx: Return #t from all phases.Tobias Geerinckx-Rice
* gnu/packages/video.scm (nyx)[arguments]: Substitute INVOKE for SYSTEM*.
2018-06-22gnu: dwm: Return #t from all phases.Tobias Geerinckx-Rice
* gnu/packages/video.scm (dwm)[arguments]: Substitute INVOKE for SYSTEM*.
2018-06-22gnu: zile-on-guile: Return #t from all phases.Tobias Geerinckx-Rice
* gnu/packages/zile.scm (zile-on-guile)[arguments]: Substitute INVOKE for SYSTEM*.
2018-06-22gnu: vpnc-scripts: Update to 20180226.07c3518.Tobias Geerinckx-Rice
* gnu/packages/vpn.scm (vpnc-scripts): Update to 20180226.07c3518.
2018-06-22gnu: vpnc-scripts: Return #t from all phases.Tobias Geerinckx-Rice
* gnu/packages/vpn.scm (vpnc-scripts)[arguments]: Substitute INVOKE for SYSTEM*. Return #t rather than undefined from phases.
2018-06-22gnu: neofetch: Tweak synopsis & description.Tobias Geerinckx-Rice
* gnu/packages/admin.scm (neofetch)[synopsis, description]: Avoid abbreviation (but draw the line at ASCII).
2018-06-22gnu: hplip: Tweak synopsis & description.Tobias Geerinckx-Rice
* gnu/packages/cups.scm (hplip)[synopis]: Remove Random Capitalisation. [description]: Likewise. Define ‘PPD’.
2018-06-22gnu: libsemanage: Return #t from all phases.Tobias Geerinckx-Rice
* gnu/packages/selinux.scm (libsemanage)[arguments]: Substitute INVOKE for SYSTEM*.
2018-06-22gnu: mplayer: Return #t from all phases.Tobias Geerinckx-Rice
* gnu/packages/video.scm (mplayer)[arguments]: Substitute INVOKE for SYSTEM*.
2018-06-22gnu: vapoursynth: Return #t from all phases.Tobias Geerinckx-Rice
* gnu/packages/video.scm (vapoursynth)[arguments]: Substitute INVOKE for SYSTEM*.
2018-06-22gnu: libsmpeg: Return #t from all phases.Tobias Geerinckx-Rice
* gnu/packages/video.scm (libsmpeg)[arguments]: Substitute INVOKE for SYSTEM*.
2018-06-22gnu: handbrake: Return #t from all phases.Tobias Geerinckx-Rice
* gnu/packages/video.scm (handbrake)[arguments]: Substitute INVOKE for SYSTEM*.
2018-06-22gnu: libmediainfo: Return #t from all phases.Tobias Geerinckx-Rice
* gnu/packages/video.scm (libmediainfo)[arguments]: Substitute INVOKE for SYSTEM*.
2018-06-22gnu: mediainfo: Return #t from all phases.Tobias Geerinckx-Rice
* gnu/packages/video.scm (mediainfo)[arguments]: Substitute INVOKE for SYSTEM*.
2018-06-22gnu: livemedia-utils: Return #t from all phases.Tobias Geerinckx-Rice
* gnu/packages/video.scm (livemedia-utils)[arguments]: Substitute INVOKE for SYSTEM*.
2018-06-22gnu: frei0r-plugins: Return #t from all phases.Tobias Geerinckx-Rice
* gnu/packages/video.scm (frei0r-plugins)[arguments]: Substitute INVOKE for SYSTEM*.
2018-06-21system: Mapped devices needed for boot do not yield Shepherd services.Ludovic Courtès
Fixes <https://bugs.gnu.org/31889>. Reported by Taylan Kammer <taylanbayirli@gmail.com>. * gnu/system.scm (non-boot-file-system-service)[mapped-devices-for-boot]: New variable. Remove dependencies of FS that are members of MAPPED-DEVICES-FOR-BOOT. (mapped-device-user): Rename to... (mapped-device-users): ... this. Use 'filter' instead of 'find'. (operating-system-user-mapped-devices) (operating-system-boot-mapped-devices): Use 'any file-system-needed-for-boot?' instead of looking at the first user. * tests/system.scm ("non-boot-file-system-service"): New test.
2018-06-21gnu: parallel: Update to 20180622.Clément Lassieur
* gnu/packages/parallel.scm (parallel): Update to 20180622.
2018-06-21gnu: hplip: Add Qt GUI support.Tobias Geerinckx-Rice
Some tools (like ‘hp-toolbox’) still refuse to launch, but at least others (like ‘hp-systrax’) now seem to work. * gnu/packages/cups.scm (hplip)[arguments]: Add #configure-flags for Qt. [inputs]: Add python-gobject and python-pyqt.
2018-06-21gnu: hplip: Update to 3.18.6.Tobias Geerinckx-Rice
* gnu/packages/cups.scm (hplip): Update to 3.18.6.
2018-06-21Order (gnu packages cups) module imports alphabetically.Tobias Geerinckx-Rice
* gnu/packages/cups.scm (define-module): Order module imports alphabetically.
2018-06-21gnu: gimp: Update to 2.10.2.Tobias Geerinckx-Rice
* gnu/packages/gimp.scm (gimp): Update to 2.10.2.
2018-06-21gnu: gegl: Update to 0.4.2.Tobias Geerinckx-Rice
* gnu/packages/gimp.scm (gegl): Update to 0.4.2.
2018-06-21gnu: babl: Update to 0.1.50.Tobias Geerinckx-Rice
* gnu/packages/gimp.scm (babl): Update to 0.1.50.
2018-06-21gnu: ruby-rack-protection: Update to 2.0.3.Tobias Geerinckx-Rice
* gnu/packages/ruby.scm (ruby-rack-protection): Update to 2.0.3.
2018-06-21gnu: ruby-rack: Update to 2.0.5.Tobias Geerinckx-Rice
* gnu/packages/ruby.scm (ruby-rack): Update to 2.0.5.
2018-06-21gnu: sdl2-image: Update to 2.0.3.Tobias Geerinckx-Rice
* gnu/packages/sdl.scm (sdl2-image): Update to 2.0.3.
2018-06-21gnu: youtube-dl: Update to 2018.06.19.Rutger Helling
* gnu/packages/video.scm (youtube-dl): Update to 2018.06.19.
2018-06-21gnu: r-httpuv: Update to 1.4.4.1.Ricardo Wurmus
* gnu/packages/web.scm (r-httpuv): Update to 1.4.4.1.
2018-06-21gnu: r-mgcv: Update to 1.8-24.Ricardo Wurmus
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-24.
2018-06-21gnu: r-mice: Update to 3.1.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-mice): Update to 3.1.0.
2018-06-21gnu: r-progress: Update to 1.2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-progress): Update to 1.2.0. [propagated-inputs]: Add r-crayon and r-hms.
2018-06-21gnu: r-complexheatmap: Update to 1.18.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-complexheatmap): Update to 1.18.1.
2018-06-21gnu: r-delayedarray: Update to 0.6.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.6.1.
2018-06-21gnu: r-optparse: Update to 1.6.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-optparse): Update to 1.6.0.
2018-06-21gnu: r-biocviews: Update to 1.48.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.48.2.
2018-06-20gnu: emacs-evil: Update to 20180517.Pierre Neidhardt
* gnu/packages/emacs.scm (emacs-evil): Update to 20180517. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-06-20gnu: emacs-evil-mu4e: Deprecate in favor of emacs-evil-collection.Pierre Neidhardt
* gnu/packages/emacs.scm (emacs-evil-mu4e): Deprecate. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-06-20gnu: emacs-evil-ediff: Deprecate in favor of emacs-evil-collection.Pierre Neidhardt
* gnu/packages/emacs.scm (emacs-evil-ediff): Deprecate. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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